BLASTX nr result

ID: Coptis23_contig00014120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014120
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   363   4e-98
ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2...   360   3e-97
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   359   5e-97
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   358   7e-97
emb|CBI23594.3| unnamed protein product [Vitis vinifera]              358   7e-97

>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  363 bits (931), Expect = 4e-98
 Identities = 173/280 (61%), Positives = 216/280 (77%)
 Frame = -2

Query: 883 ASEKWGFFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKYNSNFDLYL 704
           ASE WG F VVNH +P+SVLEEM+ GV RF+EQD  VKKE+++RD  R+V YNSNFDLY+
Sbjct: 85  ASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNEVKKEFYTRDLTRKVIYNSNFDLYV 144

Query: 703 SKAANWRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGD 524
           SKAANWRDT   LM  P P++P+E+PA CRDI +EY ++V  LG  L EL+SE +GL  +
Sbjct: 145 SKAANWRDTFYCLMA-PHPLNPQELPATCRDILMEYKEQVMRLGLKLLELMSEAIGLNPN 203

Query: 523 HLKQLQCAESCTLASHYYPACPEPELTIGTARHTDASFLTILLQDSMGGLQVLHQDHWVD 344
           HLK + CAE   +  HYYPACP+PELT+GT +H+D  FLTILLQD +GGLQVLHQD WVD
Sbjct: 204 HLKDMDCAEGLAILCHYYPACPQPELTMGTTKHSDNDFLTILLQDQIGGLQVLHQDQWVD 263

Query: 343 VSPMAGSLIVNIGDLLQIISNDKLKSVEHRVLANRNGPRVSVACFLGRRFDKSTEPCGPI 164
           V P  G+L++N+GDLLQ+I+ND+ KSVEHRVLANR GPRVSVACF       S++  GPI
Sbjct: 264 VPPEPGALVINVGDLLQLITNDRFKSVEHRVLANRRGPRVSVACFFSTSHLPSSKLYGPI 323

Query: 163 RDLISDENPPIYRDILMKEYVDHFYSQGLDGKSGLDYFKL 44
           ++L+S ENPP YR+  +++YV HF S+GLDG S L  FKL
Sbjct: 324 KELLSKENPPKYRETTVRDYVLHFRSKGLDGTSALPQFKL 363


>ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  360 bits (923), Expect = 3e-97
 Identities = 172/282 (60%), Positives = 218/282 (77%), Gaps = 2/282 (0%)
 Frame = -2

Query: 883 ASEKWGFFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKYNSNFDLYL 704
           ASE WGFF+VVNH +P+SVLEEM  GV RF+EQD  +KKEYFSRD  R+V YNSNFDLY 
Sbjct: 86  ASETWGFFEVVNHGIPVSVLEEMKDGVCRFYEQDVELKKEYFSRDYTRKVIYNSNFDLYT 145

Query: 703 SKAANWRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGD 524
           + + NWRDT+  +M  P P  PEE+PAACRDI IEYTK V  LG +LFEL+SE LGL  +
Sbjct: 146 ASSTNWRDTVSYIMA-PGPPMPEELPAACRDILIEYTKEVMKLGNSLFELLSEALGLNPN 204

Query: 523 HLKQLQCAESCTLASHYYPACPEPELTIGTARHTDASFLTILLQDSMGGLQVLHQDHWVD 344
           HLK + C++  T+  HYYPACP+PELT+GT +H+D  FLT+LLQD +GGLQV++Q+HWVD
Sbjct: 205 HLKDIDCSKGLTILGHYYPACPQPELTLGTTKHSDNDFLTVLLQDHIGGLQVMYQNHWVD 264

Query: 343 VSPMAGSLIVNIGDLLQ--IISNDKLKSVEHRVLANRNGPRVSVACFLGRRFDKSTEPCG 170
           V P  G+L++NIGDLLQ  +ISNDK  SVEHRVLANR GPRVSVA F     + ++ P G
Sbjct: 265 VPPTPGALLINIGDLLQATLISNDKFISVEHRVLANRIGPRVSVASFFSTNLNPNSRPYG 324

Query: 169 PIRDLISDENPPIYRDILMKEYVDHFYSQGLDGKSGLDYFKL 44
           PI++L+S+E+PP YR+  +++YV +F  +GLDG S L +FKL
Sbjct: 325 PIKELLSEESPPKYRETTVRDYVAYFIHKGLDGTSALLHFKL 366


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  359 bits (921), Expect = 5e-97
 Identities = 167/281 (59%), Positives = 218/281 (77%), Gaps = 1/281 (0%)
 Frame = -2

Query: 883 ASEKWGFFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRD-DRRRVKYNSNFDLY 707
           ASE WGFF VVNH +P+SVLEEM++GV+RF+EQDT VKK++++RD  R+++ YNSNFDLY
Sbjct: 86  ASETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFYTRDASRKKMVYNSNFDLY 145

Query: 706 LSKAANWRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYG 527
            + AANWRDT   LM  P P +PEE+PAACRDI +EY  ++  LG  LFELISE LGL  
Sbjct: 146 TAPAANWRDTFYCLMA-PHPPNPEELPAACRDILMEYKDQIMRLGFKLFELISEALGLNP 204

Query: 526 DHLKQLQCAESCTLASHYYPACPEPELTIGTARHTDASFLTILLQDSMGGLQVLHQDHWV 347
           +HLK + C E  ++  HYYP+CP+PELT+GT +H D  FLT+LLQD +GGLQVLHQ  W+
Sbjct: 205 NHLKDMDCTEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQIGGLQVLHQGQWI 264

Query: 346 DVSPMAGSLIVNIGDLLQIISNDKLKSVEHRVLANRNGPRVSVACFLGRRFDKSTEPCGP 167
           DV PM G+L++N+GDLLQ+I+ND+ KSVEHRVLAN  GPRVSVACF       S++  GP
Sbjct: 265 DVPPMPGALVINVGDLLQLITNDRFKSVEHRVLANHIGPRVSVACFFSTSIQPSSKLYGP 324

Query: 166 IRDLISDENPPIYRDILMKEYVDHFYSQGLDGKSGLDYFKL 44
           I++L+S+ENPP Y++  + +YV +F S+GLDG S L +F+L
Sbjct: 325 IKELLSEENPPKYKETTVGDYVAYFNSKGLDGTSALPHFRL 365


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis
            vinifera]
          Length = 673

 Score =  358 bits (920), Expect = 7e-97
 Identities = 172/280 (61%), Positives = 212/280 (75%)
 Frame = -2

Query: 883  ASEKWGFFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKYNSNFDLYL 704
            ASE WGFF VVNH + ++VLEEM  GV RF+EQDT VKK+Y+SRD  R+V YNSNFDLY 
Sbjct: 395  ASETWGFFNVVNHGISVTVLEEMKDGVRRFYEQDTEVKKQYYSRDLERKVVYNSNFDLYK 454

Query: 703  SKAANWRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGD 524
            + AANWRDT   LM  P P DP+E+P A RDI IEY   V  LG  L ELISE LGL  +
Sbjct: 455  APAANWRDTFYFLMA-PQPPDPQELPPAFRDILIEYKDEVMKLGFKLLELISEALGLKAN 513

Query: 523  HLKQLQCAESCTLASHYYPACPEPELTIGTARHTDASFLTILLQDSMGGLQVLHQDHWVD 344
            HLK + CAE   +  HYYPACP+PELT+GT +H D  FLT+LLQD +GGLQVLHQD WVD
Sbjct: 514  HLKDMDCAEGLAMLCHYYPACPQPELTMGTTKHADNDFLTVLLQDEIGGLQVLHQDQWVD 573

Query: 343  VSPMAGSLIVNIGDLLQIISNDKLKSVEHRVLANRNGPRVSVACFLGRRFDKSTEPCGPI 164
            V PM G+L++NIGDLLQ+I+ND+ KSVEHRVLA+  GPRVSVACF       S +  GPI
Sbjct: 574  VPPMPGALVINIGDLLQLITNDRFKSVEHRVLASHKGPRVSVACFFSTALLPSLKLYGPI 633

Query: 163  RDLISDENPPIYRDILMKEYVDHFYSQGLDGKSGLDYFKL 44
            ++L+S+ENPP YR+I ++++V +F ++GLDG S L++FKL
Sbjct: 634  KELLSEENPPKYREITVRDFVAYFNAKGLDGTSALEHFKL 673



 Score =  354 bits (908), Expect = 2e-95
 Identities = 168/281 (59%), Positives = 215/281 (76%), Gaps = 1/281 (0%)
 Frame = -2

Query: 883 ASEKWGFFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRD-DRRRVKYNSNFDLY 707
           ASE WGFF VVNH +P+SVLEEM++GV RFHEQDT VKK++++RD  R++V YNSNFDLY
Sbjct: 86  ASETWGFFNVVNHGIPVSVLEEMMEGVRRFHEQDTEVKKQFYTRDASRKKVMYNSNFDLY 145

Query: 706 LSKAANWRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYG 527
            + AANWRDT   LM  P P +PEE+PA+CRDI +EY  +V  LG  LFELISE LGL  
Sbjct: 146 TAPAANWRDTFYCLMA-PHPPNPEELPASCRDILMEYKDQVMRLGFKLFELISEALGLNP 204

Query: 526 DHLKQLQCAESCTLASHYYPACPEPELTIGTARHTDASFLTILLQDSMGGLQVLHQDHWV 347
           +HLK + CAE  ++  HYYP+CP+PELT+GT +H D  FLT+LLQD +GGLQVLHQ  W+
Sbjct: 205 NHLKDMDCAEGLSILCHYYPSCPQPELTMGTTKHADNDFLTVLLQDQIGGLQVLHQGQWI 264

Query: 346 DVSPMAGSLIVNIGDLLQIISNDKLKSVEHRVLANRNGPRVSVACFLGRRFDKSTEPCGP 167
           DV P  G+L++N+GDLLQ+I+ND+ KSV+HRV AN  GPRVSVACF       S++  GP
Sbjct: 265 DVPPRLGALVINVGDLLQLITNDRFKSVKHRVPANHIGPRVSVACFFRTSIQPSSKLYGP 324

Query: 166 IRDLISDENPPIYRDILMKEYVDHFYSQGLDGKSGLDYFKL 44
           I++L S+ENPP YR+  + +YV +F S+GLDG S L +F+L
Sbjct: 325 IKELSSEENPPKYRETTVGDYVAYFNSKGLDGTSALPHFRL 365


>emb|CBI23594.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  358 bits (920), Expect = 7e-97
 Identities = 172/280 (61%), Positives = 212/280 (75%)
 Frame = -2

Query: 883 ASEKWGFFQVVNHDVPLSVLEEMVKGVIRFHEQDTVVKKEYFSRDDRRRVKYNSNFDLYL 704
           ASE WGFF VVNH + ++VLEEM  GV RF+EQDT VKK+Y+SRD  R+V YNSNFDLY 
Sbjct: 54  ASETWGFFNVVNHGISVTVLEEMKDGVRRFYEQDTEVKKQYYSRDLERKVVYNSNFDLYK 113

Query: 703 SKAANWRDTLILLMLNPDPVDPEEMPAACRDITIEYTKRVANLGETLFELISEGLGLYGD 524
           + AANWRDT   LM  P P DP+E+P A RDI IEY   V  LG  L ELISE LGL  +
Sbjct: 114 APAANWRDTFYFLMA-PQPPDPQELPPAFRDILIEYKDEVMKLGFKLLELISEALGLKAN 172

Query: 523 HLKQLQCAESCTLASHYYPACPEPELTIGTARHTDASFLTILLQDSMGGLQVLHQDHWVD 344
           HLK + CAE   +  HYYPACP+PELT+GT +H D  FLT+LLQD +GGLQVLHQD WVD
Sbjct: 173 HLKDMDCAEGLAMLCHYYPACPQPELTMGTTKHADNDFLTVLLQDEIGGLQVLHQDQWVD 232

Query: 343 VSPMAGSLIVNIGDLLQIISNDKLKSVEHRVLANRNGPRVSVACFLGRRFDKSTEPCGPI 164
           V PM G+L++NIGDLLQ+I+ND+ KSVEHRVLA+  GPRVSVACF       S +  GPI
Sbjct: 233 VPPMPGALVINIGDLLQLITNDRFKSVEHRVLASHKGPRVSVACFFSTALLPSLKLYGPI 292

Query: 163 RDLISDENPPIYRDILMKEYVDHFYSQGLDGKSGLDYFKL 44
           ++L+S+ENPP YR+I ++++V +F ++GLDG S L++FKL
Sbjct: 293 KELLSEENPPKYREITVRDFVAYFNAKGLDGTSALEHFKL 332


Top