BLASTX nr result

ID: Coptis23_contig00014115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014115
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31404.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...    99   3e-19
emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]    99   3e-19
ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207...    96   2e-18
ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/57 (75%), Positives = 48/57 (84%)
 Frame = -1

Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282
           NGYGKDR Y+RDAAPRG  DRY   G AR EG SYR+RPGPYDRP+RGGRPSS++RY
Sbjct: 238 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 294


>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
           vinifera]
          Length = 278

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/57 (75%), Positives = 48/57 (84%)
 Frame = -1

Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282
           NGYGKDR Y+RDAAPRG  DRY   G AR EG SYR+RPGPYDRP+RGGRPSS++RY
Sbjct: 222 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 278


>emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
          Length = 240

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/57 (75%), Positives = 48/57 (84%)
 Frame = -1

Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282
           NGYGKDR Y+RDAAPRG  DRY   G AR EG SYR+RPGPYDRP+RGGRPSS++RY
Sbjct: 184 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 240


>ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus]
           gi|449524890|ref|XP_004169454.1| PREDICTED:
           uncharacterized LOC101207282 [Cucumis sativus]
          Length = 283

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/57 (73%), Positives = 46/57 (80%)
 Frame = -1

Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282
           NGY KDR Y+RD  PR  +DRYGS GP R+EG SYRDR GPYDRPSR GRPSSY+RY
Sbjct: 227 NGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDRY 283


>ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|222864370|gb|EEF01501.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 40/57 (70%), Positives = 45/57 (78%)
 Frame = -1

Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282
           NGYGKD+ Y+RD  PRG  DRYGS GP R +  SYR+RP PYDRPSRGG PSS+ERY
Sbjct: 224 NGYGKDKGYDRDVGPRGGNDRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPSSFERY 280


Top