BLASTX nr result
ID: Coptis23_contig00014115
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00014115 (452 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31404.3| unnamed protein product [Vitis vinifera] 99 3e-19 ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop... 99 3e-19 emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera] 99 3e-19 ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207... 96 2e-18 ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-18 >emb|CBI31404.3| unnamed protein product [Vitis vinifera] Length = 294 Score = 99.4 bits (246), Expect = 3e-19 Identities = 43/57 (75%), Positives = 48/57 (84%) Frame = -1 Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282 NGYGKDR Y+RDAAPRG DRY G AR EG SYR+RPGPYDRP+RGGRPSS++RY Sbjct: 238 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 294 >ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera] Length = 278 Score = 99.4 bits (246), Expect = 3e-19 Identities = 43/57 (75%), Positives = 48/57 (84%) Frame = -1 Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282 NGYGKDR Y+RDAAPRG DRY G AR EG SYR+RPGPYDRP+RGGRPSS++RY Sbjct: 222 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 278 >emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera] Length = 240 Score = 99.4 bits (246), Expect = 3e-19 Identities = 43/57 (75%), Positives = 48/57 (84%) Frame = -1 Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282 NGYGKDR Y+RDAAPRG DRY G AR EG SYR+RPGPYDRP+RGGRPSS++RY Sbjct: 184 NGYGKDRGYDRDAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 240 >ref|XP_004150370.1| PREDICTED: uncharacterized protein LOC101207282 [Cucumis sativus] gi|449524890|ref|XP_004169454.1| PREDICTED: uncharacterized LOC101207282 [Cucumis sativus] Length = 283 Score = 96.3 bits (238), Expect = 2e-18 Identities = 42/57 (73%), Positives = 46/57 (80%) Frame = -1 Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282 NGY KDR Y+RD PR +DRYGS GP R+EG SYRDR GPYDRPSR GRPSSY+RY Sbjct: 227 NGYVKDRVYDRDIGPRSGSDRYGSGGPGRHEGRSYRDRTGPYDRPSRVGRPSSYDRY 283 >ref|XP_002315330.1| predicted protein [Populus trichocarpa] gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa] Length = 280 Score = 95.5 bits (236), Expect = 4e-18 Identities = 40/57 (70%), Positives = 45/57 (78%) Frame = -1 Query: 452 NGYGKDRAYERDAAPRGATDRYGSSGPARYEGGSYRDRPGPYDRPSRGGRPSSYERY 282 NGYGKD+ Y+RD PRG DRYGS GP R + SYR+RP PYDRPSRGG PSS+ERY Sbjct: 224 NGYGKDKGYDRDVGPRGGNDRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPSSFERY 280