BLASTX nr result

ID: Coptis23_contig00014114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014114
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160...    88   1e-15
ref|XP_002522456.1| mads box protein, putative [Ricinus communis...    86   3e-15
ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor ...    85   9e-15
emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]    84   2e-14
ref|XP_002514742.1| mads box protein, putative [Ricinus communis...    80   2e-13

>emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160579|emb|CAY39418.1|
           MADS1 protein [Aristolochia fimbriata]
          Length = 349

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/86 (47%), Positives = 57/86 (66%)
 Frame = +2

Query: 2   DLNRNACLRLQLGGQYHYPPYGLNFLLDKNMKPDGKMNMQGPPLDYQVGTSFEPPRDGFD 181
           +LN N CLRLQLGGQ+ Y PY LN + +K  KP+G M +    +DY V + FE  R  +D
Sbjct: 264 ELNPNECLRLQLGGQFPYEPYNLNLIDEKKFKPEGDM-LHEQSVDYHV-SGFEQSRPEYD 321

Query: 182 TNHHTWGSSSVPCANGIFDDHSYQQQ 259
            NHH+W S+S  C   +F++H++QQQ
Sbjct: 322 ANHHSWASTSGHCGVPMFEEHTFQQQ 347


>ref|XP_002522456.1| mads box protein, putative [Ricinus communis]
           gi|223538341|gb|EEF39948.1| mads box protein, putative
           [Ricinus communis]
          Length = 360

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = +2

Query: 2   DLNRNACLRLQLGGQYHYPPYGLNFLLDKNMKPDGKMNMQGPPLDYQVGTSFEPPRDGFD 181
           +LN  A LRLQL GQY + PY LN L D   +P   MN+Q  P+D+ V  SFE P+ G+D
Sbjct: 266 ELNGTASLRLQLAGQYPHLPYNLNMLNDTKFQPAADMNIQESPVDFHVNGSFEVPKPGYD 325

Query: 182 TNHHTWGSSSVPCANGIFDDHSYQQ 256
           T   +W SSS PCA  +FD+  Y +
Sbjct: 326 TTPGSWASSSGPCAVTMFDEQLYSR 350


>ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor 2A homolog [Vitis
           vinifera] gi|297733964|emb|CBI15211.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
 Frame = +2

Query: 5   LNRNACLRLQLGGQYHYPPYG-LNFLLDKNMKPDGKMNMQGPPLDYQVGTSFEPPRDGFD 181
           L+ N+ LRLQL  QY Y P+G LN   +K +KP+ +MN+QG P+DYQV  +FE P   +D
Sbjct: 271 LSGNSNLRLQLSEQYLYSPFGNLNLPDEKKLKPEMEMNLQGNPVDYQVNGNFEIPAPIYD 330

Query: 182 TNHHTWGSSSVPCANGIFDDHSYQQ 256
              HTW S+S PC+  +FD++S+ Q
Sbjct: 331 NRQHTWVSASGPCSIAMFDENSFSQ 355


>emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]
          Length = 465

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
 Frame = +2

Query: 5   LNRNACLRLQLGGQYHYPPYG-LNFLLDKNMKPDGKMNMQGPPLDYQVGTSFEPPRDGFD 181
           L+ N+ LRLQL  QY Y P+G +N   +K +KP+ +MN+QG P+DYQV  +FE P   +D
Sbjct: 345 LSGNSNLRLQLSEQYLYSPFGNMNLPDEKKLKPEMEMNLQGNPVDYQVNGNFEIPAPIYD 404

Query: 182 TNHHTWGSSSVPCANGIFDDHSYQQ 256
              HTW S+S PC+  +FD++S+ Q
Sbjct: 405 NRQHTWVSASGPCSIAMFDENSFSQ 429


>ref|XP_002514742.1| mads box protein, putative [Ricinus communis]
           gi|223546346|gb|EEF47848.1| mads box protein, putative
           [Ricinus communis]
          Length = 363

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   LNRNACLRLQLGGQYHYPPYG-LNFLLDKNMKPDGKMNMQGPPLDYQVGTSFEPPRDGFD 181
           L+ N CL +QL  Q+ YPPY  LN    K +KP+ +MN QG    YQV ++FE PR  +D
Sbjct: 270 LSSNTCLNVQLDEQFLYPPYSSLNLPDVKEVKPEMQMNNQGNHTVYQVNSNFELPRPMYD 329

Query: 182 TNHHTWGSSSVPCANGIFDDHSYQQQH 262
             HHTW S+S PC+  +F+++ Y Q +
Sbjct: 330 NEHHTWFSASGPCSIAMFNENPYHQNN 356


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