BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014103
         (1492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-li...   562   e-158
ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [V...   557   e-156
ref|XP_002319912.1| predicted protein [Populus trichocarpa] gi|3...   555   e-156
ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana] gi|30819...   553   e-155
gb|AAM62684.1| lipoic acid synthase-like protein [Arabidopsis th...   553   e-155

>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max]
          Length = 364

 Score =  562 bits (1449), Expect = e-158
 Identities = 277/309 (89%), Positives = 286/309 (92%)
 Frame = -1

Query: 1351 YPGGGMGVHTGRDPNVKKPAWLRQKAPQGERFXXXXXXXXXXXLNTVCEEAQCPNIGECW 1172
            YPGG +G HTGRDPN KKP WLRQKAPQGERF           LNTVCEEAQCPNIGECW
Sbjct: 48   YPGG-LGPHTGRDPNAKKPEWLRQKAPQGERFQEIKESLSHLKLNTVCEEAQCPNIGECW 106

Query: 1171 NGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLT 992
            NGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP P DPMEPENTAKAIASWGVDYIVLT
Sbjct: 107  NGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPPPADPMEPENTAKAIASWGVDYIVLT 166

Query: 991  SVDRDDLPDGGSGHFARTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAHNV 812
            SVDRDDLPDGGSGHFA+TV+AMK+L P+IMVECLTSDFRGDL AV +LVHSGLDVFAHN+
Sbjct: 167  SVDRDDLPDGGSGHFAQTVKAMKNLKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNI 226

Query: 811  ETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRA 632
            ETVKRLQRIVRDPRAGYEQSLSVLKHAK  KEGMITKTSIMLGLGESD+EVKEAMADLRA
Sbjct: 227  ETVKRLQRIVRDPRAGYEQSLSVLKHAKHSKEGMITKTSIMLGLGESDDEVKEAMADLRA 286

Query: 631  IDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGEL 452
            IDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGEL
Sbjct: 287  IDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKEYGESIGFRYVASGPLVRSSYRAGEL 346

Query: 451  FVKTMVREK 425
            FVKTMVREK
Sbjct: 347  FVKTMVREK 355


>ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [Vitis vinifera]
            gi|297742716|emb|CBI35350.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  557 bits (1436), Expect = e-156
 Identities = 279/353 (79%), Positives = 298/353 (84%), Gaps = 1/353 (0%)
 Frame = -1

Query: 1456 PITIPTHSKPKSLIHYYYSRPTRINIVGAEAVDYTYPGGGM-GVHTGRDPNVKKPAWLRQ 1280
            P+  P  S   S  H Y      + IVG+ +         + G  TGRDPNVKKPAWLRQ
Sbjct: 18   PLKTPPKSSSHSSTHCYNHTSWGLRIVGSSSSSSNTESKSLNGAFTGRDPNVKKPAWLRQ 77

Query: 1279 KAPQGERFXXXXXXXXXXXLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR 1100
            +A QGERF           LNTVC+EAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR
Sbjct: 78   RAAQGERFEEVKQSLSHLNLNTVCQEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR 137

Query: 1099 FCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTVEAMKS 920
            FCAVKTSRNP+PPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTV+AMK 
Sbjct: 138  FCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTVKAMKK 197

Query: 919  LSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAHNVETVKRLQRIVRDPRAGYEQSLSVL 740
              P+IMVECLTSDFRGDL+AV +LVHSGLDVFAHN+ETVKRLQRIVRDPRAGYEQSLSVL
Sbjct: 198  FKPEIMVECLTSDFRGDLSAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVL 257

Query: 739  KHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY 560
            KHAK  K GMITK+SIMLGLGESD+E+KEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY
Sbjct: 258  KHAKHSKVGMITKSSIMLGLGESDDELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY 317

Query: 559  VTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVREKNIFSTTGS 401
            VTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVK+MVRE+   S T S
Sbjct: 318  VTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKSMVRERASASATAS 370


>ref|XP_002319912.1| predicted protein [Populus trichocarpa]
            gi|308191445|sp|B9I666.1|LISC1_POPTR RecName: Full=Lipoyl
            synthase 1, chloroplastic; AltName: Full=Lipoate synthase
            1; Short=LS 1; Short=Lip-syn 1; AltName: Full=Lipoate
            synthase, plastidial 1; Short=LIP1p 1; AltName:
            Full=Lipoic acid synthase 1; Flags: Precursor
            gi|222858288|gb|EEE95835.1| predicted protein [Populus
            trichocarpa]
          Length = 376

 Score =  555 bits (1431), Expect = e-156
 Identities = 279/356 (78%), Positives = 297/356 (83%), Gaps = 9/356 (2%)
 Frame = -1

Query: 1468 SLTKPITIPTHSKPKSLIHYYYSRPTRINIVGAEAVDYTYP---------GGGMGVHTGR 1316
            SL+ PI  P  SK   L  Y   R   ++   +  +D  +P         GG MG +TGR
Sbjct: 12   SLSIPIPQPPKSKSSFLCSYSKIRCESVDYPSSSKIDAKHPQISSINSNGGGKMGSYTGR 71

Query: 1315 DPNVKKPAWLRQKAPQGERFXXXXXXXXXXXLNTVCEEAQCPNIGECWNGGGDGIATATI 1136
            DPNVKKP WLRQKAPQGER+           LNTVC+EAQCPNIGECWNGGGDGIATATI
Sbjct: 72   DPNVKKPEWLRQKAPQGERYDEVKESLSRLKLNTVCQEAQCPNIGECWNGGGDGIATATI 131

Query: 1135 MLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGS 956
            M+LGDTCTRGCRFCAVKTSRNP PPDPMEP NTA AIASWGVDYIV+TSVDRDDLPDGGS
Sbjct: 132  MVLGDTCTRGCRFCAVKTSRNPPPPDPMEPLNTALAIASWGVDYIVITSVDRDDLPDGGS 191

Query: 955  GHFARTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAHNVETVKRLQRIVRD 776
            GHFA+TV AMK L P+IMVECLTSDFRGDL AV +LVHSGLDVFAHNVETVKRLQRIVRD
Sbjct: 192  GHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNVETVKRLQRIVRD 251

Query: 775  PRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYL 596
            PRAGYEQSLSVLKHAK+ K+GMITKTSIMLGLGESD EVKEAMADLRAI VDILT GQYL
Sbjct: 252  PRAGYEQSLSVLKHAKISKKGMITKTSIMLGLGESDNEVKEAMADLRAIGVDILTFGQYL 311

Query: 595  QPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVRE 428
            QPTPLHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVKTMV+E
Sbjct: 312  QPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKTMVKE 367


>ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana]
            gi|308191548|sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl
            synthase, chloroplastic; AltName: Full=Lipoate synthase;
            Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase,
            plastidial; Short=LIP1p; AltName: Full=Lipoic acid
            synthase; Flags: Precursor gi|20373023|dbj|BAB91180.1|
            lipoic acid synthase [Arabidopsis thaliana]
            gi|98960967|gb|ABF58967.1| At5g08415 [Arabidopsis
            thaliana] gi|332003915|gb|AED91298.1| lipoyl synthase
            [Arabidopsis thaliana]
          Length = 394

 Score =  553 bits (1425), Expect = e-155
 Identities = 270/310 (87%), Positives = 284/310 (91%), Gaps = 2/310 (0%)
 Frame = -1

Query: 1351 YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFXXXXXXXXXXXLNTVCEEAQCPNIGE 1178
            YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF           LNTVCEEAQCPNIGE
Sbjct: 78   YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGE 137

Query: 1177 CWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIV 998
            CWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEPENTAKAIASWGVDYIV
Sbjct: 138  CWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIV 197

Query: 997  LTSVDRDDLPDGGSGHFARTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAH 818
            +TSVDRDD+PDGGSGHFA+TV+AMK   PDIM+ECLTSDFRGDL AV +LVHSGLDVFAH
Sbjct: 198  ITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAH 257

Query: 817  NVETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADL 638
            NVETVKRLQR+VRDPRAGYEQS+SVLKHAK+ K GMITKTSIMLGLGE+DEE+KEAMADL
Sbjct: 258  NVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADL 317

Query: 637  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAG 458
            RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSYRAG
Sbjct: 318  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAG 377

Query: 457  ELFVKTMVRE 428
            ELFVKTMV+E
Sbjct: 378  ELFVKTMVKE 387


>gb|AAM62684.1| lipoic acid synthase-like protein [Arabidopsis thaliana]
          Length = 393

 Score =  553 bits (1425), Expect = e-155
 Identities = 270/310 (87%), Positives = 284/310 (91%), Gaps = 2/310 (0%)
 Frame = -1

Query: 1351 YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFXXXXXXXXXXXLNTVCEEAQCPNIGE 1178
            YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF           LNTVCEEAQCPNIGE
Sbjct: 77   YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGE 136

Query: 1177 CWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIV 998
            CWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEPENTAKAIASWGVDYIV
Sbjct: 137  CWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIV 196

Query: 997  LTSVDRDDLPDGGSGHFARTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAH 818
            +TSVDRDD+PDGGSGHFA+TV+AMK   PDIM+ECLTSDFRGDL AV +LVHSGLDVFAH
Sbjct: 197  ITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAH 256

Query: 817  NVETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADL 638
            NVETVKRLQR+VRDPRAGYEQS+SVLKHAK+ K GMITKTSIMLGLGE+DEE+KEAMADL
Sbjct: 257  NVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADL 316

Query: 637  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAG 458
            RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSYRAG
Sbjct: 317  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAG 376

Query: 457  ELFVKTMVRE 428
            ELFVKTMV+E
Sbjct: 377  ELFVKTMVKE 386