BLASTX nr result

ID: Coptis23_contig00014101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014101
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   337   2e-90
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   293   2e-77
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   293   4e-77
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   293   4e-77
ref|NP_001190549.1| inactive beta-amylase 4 [Arabidopsis thalian...   293   4e-77

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
           gi|296089917|emb|CBI39736.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  337 bits (863), Expect = 2e-90
 Identities = 161/203 (79%), Positives = 176/203 (86%), Gaps = 3/203 (1%)
 Frame = -2

Query: 757 SGVPFFEDGGESFPSDYGQFFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAK 578
           SGVPFFE+G ESF SDYG+FFLEWYSGRLI HADAIL KAAN+  KYQ +   +VLLVAK
Sbjct: 320 SGVPFFEEGQESFLSDYGRFFLEWYSGRLIRHADAILTKAANMLKKYQESKKSSVLLVAK 379

Query: 577 IGGIYWWYQTESHPAELTAGYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHY 398
           IGGIYWWY T SHPAELTAGYYNTALRDGYDP+AS+LSRHGAALH+SCLEMMD+ETP  Y
Sbjct: 380 IGGIYWWYHTLSHPAELTAGYYNTALRDGYDPVASMLSRHGAALHISCLEMMDNETPPTY 439

Query: 397 RCSPEGLLQQIRKVSKERIIHLTGRNTNERFDKAGLWQIMANCYQAQA---GSFTYFRMN 227
            CSPE LLQQI  VSK+RI+HLTGRNTNERFDKAGLWQI ANCY  QA    SFTYFRMN
Sbjct: 440 LCSPERLLQQIWTVSKKRIVHLTGRNTNERFDKAGLWQIHANCYHPQAEAVRSFTYFRMN 499

Query: 226 DKIFRVENWNNFLPFVRRMHTDL 158
           +KIFR ENWNNF+PFVR+M TD+
Sbjct: 500 EKIFRAENWNNFVPFVRKMSTDM 522


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  293 bits (751), Expect = 2e-77
 Identities = 140/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
 Frame = -2

Query: 757 SGVPFFEDGGESFPSDYGQFFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAK 578
           SGVPFFE+G +SF SDYG+FFLEWYSG+LI HADAIL KAA+V  + Q +   +V+LVAK
Sbjct: 329 SGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEDEKSSVMLVAK 388

Query: 577 IGGIYWWYQTESHPAELTAGYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHY 398
           IGGIYWWY+T SHPAELTAGYYNTALRDGYDP+ASVLSRHGAALH+ CL+M DSETP  Y
Sbjct: 389 IGGIYWWYKTSSHPAELTAGYYNTALRDGYDPVASVLSRHGAALHIPCLDMADSETPEKY 448

Query: 397 RCSPEGLLQQIRKVSKERIIHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMN 227
            CSPEGL +QI  VSK+  I +TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN
Sbjct: 449 LCSPEGLRKQIHDVSKKWTIQVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMN 508

Query: 226 DKIFRVENWNNFLPFVRRMHTDL 158
           +KIFR ENWNNF+PF+R+M  D+
Sbjct: 509 EKIFRGENWNNFVPFIRQMSADM 531


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  293 bits (749), Expect = 4e-77
 Identities = 139/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
 Frame = -2

Query: 757 SGVPFFEDGGESFPSDYGQFFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAK 578
           SGVPFFE+G +SF SDYG+FFLEWYSG+LI HADAIL KAA+V  + Q     +V+LVAK
Sbjct: 282 SGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAK 341

Query: 577 IGGIYWWYQTESHPAELTAGYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHY 398
           IGGIYWWY+T SHPAELTAGYYNT+LRDGYDP+ASVLSRHGAAL++ CL+M DSE P  Y
Sbjct: 342 IGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKY 401

Query: 397 RCSPEGLLQQIRKVSKERIIHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMN 227
            CSPEGL +QI  VSK+  IH+TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN
Sbjct: 402 LCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMN 461

Query: 226 DKIFRVENWNNFLPFVRRMHTDL 158
           +KIFRVENWNNF+PF+R+M  D+
Sbjct: 462 EKIFRVENWNNFVPFIRQMSADM 484


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName:
           Full=Inactive beta-amylase 4, chloroplastic; AltName:
           Full=Inactive beta-amylase 6; Flags: Precursor
           gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
           thaliana] gi|332009286|gb|AED96669.1| inactive
           beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  293 bits (749), Expect = 4e-77
 Identities = 139/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
 Frame = -2

Query: 757 SGVPFFEDGGESFPSDYGQFFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAK 578
           SGVPFFE+G +SF SDYG+FFLEWYSG+LI HADAIL KAA+V  + Q     +V+LVAK
Sbjct: 329 SGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAK 388

Query: 577 IGGIYWWYQTESHPAELTAGYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHY 398
           IGGIYWWY+T SHPAELTAGYYNT+LRDGYDP+ASVLSRHGAAL++ CL+M DSE P  Y
Sbjct: 389 IGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKY 448

Query: 397 RCSPEGLLQQIRKVSKERIIHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMN 227
            CSPEGL +QI  VSK+  IH+TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN
Sbjct: 449 LCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMN 508

Query: 226 DKIFRVENWNNFLPFVRRMHTDL 158
           +KIFRVENWNNF+PF+R+M  D+
Sbjct: 509 EKIFRVENWNNFVPFIRQMSADM 531


>ref|NP_001190549.1| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|332009287|gb|AED96670.1| inactive beta-amylase 4
           [Arabidopsis thaliana]
          Length = 489

 Score =  293 bits (749), Expect = 4e-77
 Identities = 139/203 (68%), Positives = 164/203 (80%), Gaps = 3/203 (1%)
 Frame = -2

Query: 757 SGVPFFEDGGESFPSDYGQFFLEWYSGRLIHHADAILEKAANVFNKYQNNGSDTVLLVAK 578
           SGVPFFE+G +SF SDYG+FFLEWYSG+LI HADAIL KAA+V  + Q     +V+LVAK
Sbjct: 287 SGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAK 346

Query: 577 IGGIYWWYQTESHPAELTAGYYNTALRDGYDPLASVLSRHGAALHVSCLEMMDSETPSHY 398
           IGGIYWWY+T SHPAELTAGYYNT+LRDGYDP+ASVLSRHGAAL++ CL+M DSE P  Y
Sbjct: 347 IGGIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKY 406

Query: 397 RCSPEGLLQQIRKVSKERIIHLTGRNTNERFDKAGLWQIMANCYQAQAG---SFTYFRMN 227
            CSPEGL +QI  VSK+  IH+TGRNT+ERFD+ GL QI  NC Q       SFT+ RMN
Sbjct: 407 LCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRSFTFCRMN 466

Query: 226 DKIFRVENWNNFLPFVRRMHTDL 158
           +KIFRVENWNNF+PF+R+M  D+
Sbjct: 467 EKIFRVENWNNFVPFIRQMSADM 489


Top