BLASTX nr result

ID: Coptis23_contig00014100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014100
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162514.1| PREDICTED: LOW QUALITY PROTEIN: trihelix tra...   190   5e-46
ref|XP_004139609.1| PREDICTED: uncharacterized protein LOC101216...   190   5e-46
ref|XP_003547291.1| PREDICTED: trihelix transcription factor GT-...   183   8e-44
ref|XP_003534745.1| PREDICTED: trihelix transcription factor GT-...   182   1e-43
ref|XP_003635505.1| PREDICTED: uncharacterized protein LOC100852...   181   3e-43

>ref|XP_004162514.1| PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor
           GTL1-like [Cucumis sativus]
          Length = 300

 Score =  190 bits (483), Expect = 5e-46
 Identities = 101/219 (46%), Positives = 138/219 (63%)
 Frame = -1

Query: 722 ERLSKKRKRNTCTEIELFLLSMVDKVMEKQEEMHRKLIEVVDXXXXXXXXXXXXXRKCEM 543
           + LS KRKR T   +E F+  +V KVM+KQEEMHR+LI++++             ++ E+
Sbjct: 38  KHLSHKRKR-TRRSLEHFVEKLVMKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREI 96

Query: 542 ERQKRAKEMREQEASRHLALISYLEKMLGQTIKAPLFPETPHVEKDKGGKRVKTEYVFDS 363
           ER KR +E+R QE SR LA+IS ++ +LG  I+     E    E D G   ++ E   D 
Sbjct: 97  ERIKRDEELRAQETSRSLAIISLIQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDP 156

Query: 362 MTKRWPMPEVQALIRLRMEMANRFRTSDSKISIWEEISQQMASMGYTRDAKKCKEKWENM 183
             +RWP  EVQ+LI LR  + ++FR + SK SIWEEIS +M  MGY R AKKCKEKWENM
Sbjct: 157 SGRRWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENM 216

Query: 182 NKYYKTKLASGNKQPKGAKGCPYYQELDNLYRNRLLDSG 66
           NKY+K  + +G       K CPY+QELD LYRN ++++G
Sbjct: 217 NKYFKRTVVTGKASIANGKTCPYFQELDILYRNGVVNTG 255


>ref|XP_004139609.1| PREDICTED: uncharacterized protein LOC101216718 [Cucumis sativus]
          Length = 445

 Score =  190 bits (483), Expect = 5e-46
 Identities = 101/219 (46%), Positives = 138/219 (63%)
 Frame = -1

Query: 722 ERLSKKRKRNTCTEIELFLLSMVDKVMEKQEEMHRKLIEVVDXXXXXXXXXXXXXRKCEM 543
           + LS KRKR T   +E F+  +V KVM+KQEEMHR+LI++++             ++ E+
Sbjct: 183 KHLSHKRKR-TRRSLEHFVEKLVMKVMDKQEEMHRQLIDMIEKKENERTVREEAWKQREI 241

Query: 542 ERQKRAKEMREQEASRHLALISYLEKMLGQTIKAPLFPETPHVEKDKGGKRVKTEYVFDS 363
           ER KR +E+R QE SR LA+IS ++ +LG  I+     E    E D G   ++ E   D 
Sbjct: 242 ERIKRDEELRAQETSRSLAIISLIQNLLGHEIQISRPAENQCAEDDGGESSIQKELKCDP 301

Query: 362 MTKRWPMPEVQALIRLRMEMANRFRTSDSKISIWEEISQQMASMGYTRDAKKCKEKWENM 183
             +RWP  EVQ+LI LR  + ++FR + SK SIWEEIS +M  MGY R AKKCKEKWENM
Sbjct: 302 SGRRWPQAEVQSLISLRTSLEHKFRATGSKGSIWEEISIEMQKMGYKRSAKKCKEKWENM 361

Query: 182 NKYYKTKLASGNKQPKGAKGCPYYQELDNLYRNRLLDSG 66
           NKY+K  + +G       K CPY+QELD LYRN ++++G
Sbjct: 362 NKYFKRTVVTGKASIANGKTCPYFQELDILYRNGVVNTG 400


>ref|XP_003547291.1| PREDICTED: trihelix transcription factor GT-2-like [Glycine max]
          Length = 338

 Score =  183 bits (464), Expect = 8e-44
 Identities = 96/217 (44%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
 Frame = -1

Query: 710 KKRKRNTCTEIELFLLSMVDKVMEKQEEMHRKLIEVVDXXXXXXXXXXXXXRKCEMERQK 531
           +K++R    ++E F   +V KVMEKQE+MH++L+E+++             +  EMER +
Sbjct: 102 RKKRRKMVRKLEDFAKDLVVKVMEKQEQMHKQLLEIIENNERERIKREAAWKNEEMERIR 161

Query: 530 RAKEMREQEASRHLALISYLEKMLGQTIKAPLFPETP--HVEKDKGGKRVKTEYVFDSMT 357
           + +E R QE SR+LALIS+++ +LG  I+ P  P  P    E+D+     + E   D   
Sbjct: 162 KDEEARAQENSRNLALISFIQNLLGHEIQIPQQPAKPCSKREEDEVEASARKELNNDPGD 221

Query: 356 KRWPMPEVQALIRLRMEMANRFRTSDSKISIWEEISQQMASMGYTRDAKKCKEKWENMNK 177
            RWP  EVQ+LI +R  + ++FR   SK +IWEEIS+ M  MGY R AKKCKEKWEN+NK
Sbjct: 222 NRWPDVEVQSLITVRTSLEHKFRLMGSKGTIWEEISEAMNGMGYNRSAKKCKEKWENINK 281

Query: 176 YYKTKLASGNKQPKGAKGCPYYQELDNLYRNRLLDSG 66
           YYK  + SG K+ + +K CPY+ ELD LYR  LL  G
Sbjct: 282 YYKRTIGSGKKRRQNSKTCPYFDELDILYRKGLLSIG 318


>ref|XP_003534745.1| PREDICTED: trihelix transcription factor GT-2-like [Glycine max]
          Length = 338

 Score =  182 bits (463), Expect = 1e-43
 Identities = 96/217 (44%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
 Frame = -1

Query: 707 KRKRNTCTEIELFLLSMVDKVMEKQEEMHRKLIEVVDXXXXXXXXXXXXXRKCEMERQKR 528
           K++R T  ++E FL  ++ KVMEKQE+MH +L+E+++             +  EMER ++
Sbjct: 102 KKRRKTVRKLEDFLKDLMAKVMEKQEQMHEQLLEIIENKERERIKREEAWKNEEMERIRK 161

Query: 527 AKEMREQEASRHLALISYLEKMLGQTIKAPLFPETPHVEKDKGGKRVKTEYVFD---SMT 357
            +E R Q  SR+LALIS+++ +LG  I+ P  P  P  ++++    V      +   S  
Sbjct: 162 DEEARAQVNSRNLALISFIQNLLGHEIQIPQQPVEPCSKREEDEVEVSARKDLNNDPSDN 221

Query: 356 KRWPMPEVQALIRLRMEMANRFRTSDSKISIWEEISQQMASMGYTRDAKKCKEKWENMNK 177
            RWP  EVQALI +R  + ++FR   SK SIWEEIS+ M  MGY R +KKCKEKWEN+NK
Sbjct: 222 NRWPDVEVQALITVRTSLEHKFRFMGSKGSIWEEISEAMNGMGYNRSSKKCKEKWENINK 281

Query: 176 YYKTKLASGNKQPKGAKGCPYYQELDNLYRNRLLDSG 66
           YYK  + SG K+ + +K CPY+ ELD LYRN LL  G
Sbjct: 282 YYKRTIGSGKKRRQNSKTCPYFDELDILYRNGLLSIG 318


>ref|XP_003635505.1| PREDICTED: uncharacterized protein LOC100852457 [Vitis vinifera]
          Length = 416

 Score =  181 bits (459), Expect = 3e-43
 Identities = 97/217 (44%), Positives = 136/217 (62%), Gaps = 2/217 (0%)
 Frame = -1

Query: 710 KKRKRNTCTEIELFLLSMVDKVMEKQEEMHRKLIEVVDXXXXXXXXXXXXXRKCEMERQK 531
           +KRKR T  ++E FL S+  KV++ QE+MH +LIE+++             ++ EM+R K
Sbjct: 178 RKRKRRTRKKLEFFLESLARKVIKNQEQMHMQLIELLEKRERDRIVREEAWKQQEMDRAK 237

Query: 530 RAKEMREQEASRHLALISYLEKMLGQTIKAPLFPETPHVEKDKGGKRVKTE--YVFDSMT 357
           R +E+R QE SR LALIS+++ +LG  I  P   E   +E++   + ++ +    +D   
Sbjct: 238 RYEEVRAQETSRSLALISFIQNILGHEIHCPQSLENSSLEEEIQNQEIQNQRDLRYDPSN 297

Query: 356 KRWPMPEVQALIRLRMEMANRFRTSDSKISIWEEISQQMASMGYTRDAKKCKEKWENMNK 177
           KRWP  EVQALI LR  + ++FR   +K SIWEEIS  M+SMGYTR AKKCKEKWEN+NK
Sbjct: 298 KRWPKSEVQALITLRTTLDHKFRNMGAKGSIWEEISTGMSSMGYTRTAKKCKEKWENINK 357

Query: 176 YYKTKLASGNKQPKGAKGCPYYQELDNLYRNRLLDSG 66
           YY+    SG K        PY+ ELD LY+N L++ G
Sbjct: 358 YYRRSTGSGKK-------LPYFNELDVLYKNGLINPG 387


Top