BLASTX nr result

ID: Coptis23_contig00014094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014094
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531948.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256...    59   3e-07
emb|CAN62593.1| hypothetical protein VITISV_027396 [Vitis vinifera]    59   3e-07
ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|ABK96124.1| unknown [Populus trichocarpa]                           57   2e-06

>ref|XP_002531948.1| conserved hypothetical protein [Ricinus communis]
           gi|223528394|gb|EEF30430.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 12/115 (10%)
 Frame = +1

Query: 1   ADGLSLEVNENGNDIQEERSS------VEEKKVFGKTVIAEDQEDLDVDKWLEE-DVETG 159
           +D  SL ++++ + I E           E  ++   T   E  ++   D+WL+E ++ T 
Sbjct: 242 SDPASLHISQDSSKITERAEDNIPSQGKEVTEIANATGRLEIDDEESADQWLKETEINTD 301

Query: 160 PSFNSQNQLGNKQDVSFSDLEDDDNDTSS----SNPAKNI-HLSSPNESSGWVQL 309
            + + Q +L +++DVSFSDLE+DDND +S    S  A+ I  + SP+ SS WVQL
Sbjct: 302 TTLDGQKKLEHEEDVSFSDLENDDNDLASRLSGSKKAQEITRVPSPSGSSDWVQL 356


>ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256011 [Vitis vinifera]
           gi|297739010|emb|CBI28255.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = +1

Query: 52  ERSSVEEKKVFGKTVIAEDQEDLDVDKWLE-----EDVETGPSFNSQNQLGNKQDVSFSD 216
           E S  +EK+V  ++V    + D    +  E     ED +TG S  +  +L N+ DVSFSD
Sbjct: 253 EDSPSQEKEVLSESVSVAHEMDKGEQESTEQLLEEEDADTGNSVGAVKRLENEDDVSFSD 312

Query: 217 LEDDDND----TSSSNPAKNIHLSSPNESSGWVQL 309
           LEDDDND     S      +I +SSPN S+ WV+L
Sbjct: 313 LEDDDNDLSRRLSGLRLKDDIRVSSPNGSNEWVKL 347


>emb|CAN62593.1| hypothetical protein VITISV_027396 [Vitis vinifera]
          Length = 250

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = +1

Query: 52  ERSSVEEKKVFGKTVIAEDQEDLDVDKWLE-----EDVETGPSFNSQNQLGNKQDVSFSD 216
           E S  +EK+V  ++V    + D    +  E     ED +TG S  +  +L N+ DVSFSD
Sbjct: 113 EDSPSQEKEVLSESVSVAHEMDKGEQESTEQLLEEEDADTGNSVGAVKRLENEDDVSFSD 172

Query: 217 LEDDDND----TSSSNPAKNIHLSSPNESSGWVQL 309
           LEDDDND     S      +I +SSPN S+ WV+L
Sbjct: 173 LEDDDNDLSRRLSGLRLKDDIRVSSPNGSNEWVKL 207


>ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|222866064|gb|EEF03195.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 17/117 (14%)
 Frame = +1

Query: 10  LSLEVNENGNDIQEERSSVEEKKVFGK--------TVIAEDQEDLDVDK-----WLEEDV 150
           L L+  +N  +++ E S   +    G+        T IA+  E L +++     + +E +
Sbjct: 216 LLLQKLQNKRNVKVESSKNSKSGTQGEITTSQEEITEIADATEGLKINEENSRQFSKEKI 275

Query: 151 ETGPSFNSQNQLGNKQDVSFSDLEDDDND----TSSSNPAKNIHLSSPNESSGWVQL 309
           +   S ++  +L ++QDVSFSDLEDDD+D     S+S  A++I   SP+ SS W+QL
Sbjct: 276 DNSTSMDNHKKLEDEQDVSFSDLEDDDSDFSIRLSASRKARSIRAPSPSGSSDWIQL 332


>gb|ABK96124.1| unknown [Populus trichocarpa]
          Length = 219

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 17/117 (14%)
 Frame = +1

Query: 10  LSLEVNENGNDIQEERSSVEEKKVFGK--------TVIAEDQEDLDVDK-----WLEEDV 150
           L L+  +N  +++ E S   +    G+        T IA+  E L +++     + +E +
Sbjct: 66  LLLQKLQNKRNVKVESSKNSKSGTQGEITTSQEEITEIADATEGLKINEENSRQFSKEKI 125

Query: 151 ETGPSFNSQNQLGNKQDVSFSDLEDDDND----TSSSNPAKNIHLSSPNESSGWVQL 309
           +   S ++  +L ++QDVSFSDLEDDD+D     S+S  A++I   SP+ SS W+QL
Sbjct: 126 DNSTSMDNHKKLEDEQDVSFSDLEDDDSDFSIRLSASRKARSIRAPSPSGSSDWIQL 182


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