BLASTX nr result

ID: Coptis23_contig00014093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014093
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531948.1| conserved hypothetical protein [Ricinus comm...   259   7e-67
ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256...   241   3e-61
ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|2...   228   2e-57
ref|XP_002525300.1| conserved hypothetical protein [Ricinus comm...   218   2e-54
ref|XP_002308058.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54

>ref|XP_002531948.1| conserved hypothetical protein [Ricinus communis]
            gi|223528394|gb|EEF30430.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  259 bits (663), Expect = 7e-67
 Identities = 155/339 (45%), Positives = 215/339 (63%), Gaps = 22/339 (6%)
 Frame = +3

Query: 186  KEDLSELGKTLTRQLWGVASFLAPPPSTNAPTISSTEEGDSQT--LVGIRNDFAEXXXXX 359
            K+D+S +  +++RQL GVA+FLAPPPS  +P+ + +E  DSQ+  L GIRND AE     
Sbjct: 22   KDDISVISDSISRQLRGVANFLAPPPSPPSPSENKSEPLDSQSQALQGIRNDLAEIGGSL 81

Query: 360  XXXXXXXXXNKAVNQISRLASNILQF--------NDDDDEGLGSGVVGISEEALEFVREI 515
                     NKAV +IS+  S++LQF        NDDD E     V GI+ E ++FV+EI
Sbjct: 82   KSGLSLLSTNKAVTEISKFTSSLLQFQSNSNYRDNDDDYEDDDDDVAGITNEVIDFVKEI 141

Query: 516  SLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHFWMIY 695
            S RP+CWTDFPL+L   DF MS AQREHAS VEH  PSL  L+ NL   +M +E FW+IY
Sbjct: 142  SSRPECWTDFPLSLH-YDFKMSDAQREHASIVEHFVPSLKALRANL-HGHMGDEQFWLIY 199

Query: 696  FILLHPRLHKHDVELLSTSQIVETRDILLQTLQKRTNAQLQTSTADGLSLEMNENGNDIQ 875
            FILL PRL++HD+E+LST QIVETR+ILLQ LQ + N +++ S  D  SL ++++ + I 
Sbjct: 200  FILLLPRLNEHDIEILSTPQIVETRNILLQKLQNKKNLKVENS--DPASLHISQDSSKIT 257

Query: 876  EE------RSSVEEKKVFSKTVIAEDQEDLDVDKWLEE-DVETGPSFNSRNQLGNEQDVS 1034
            E           E  ++ + T   E  ++   D+WL+E ++ T  + + + +L +E+DVS
Sbjct: 258  ERAEDNIPSQGKEVTEIANATGRLEIDDEESADQWLKETEINTDTTLDGQKKLEHEEDVS 317

Query: 1035 FSDLEDDDNDTSS----SNPAKNI-HLSSPNDSSGWVQL 1136
            FSDLE+DDND +S    S  A+ I  + SP+ SS WVQL
Sbjct: 318  FSDLENDDNDLASRLSGSKKAQEITRVPSPSGSSDWVQL 356


>ref|XP_002282479.1| PREDICTED: uncharacterized protein LOC100256011 [Vitis vinifera]
            gi|297739010|emb|CBI28255.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  241 bits (614), Expect = 3e-61
 Identities = 156/336 (46%), Positives = 197/336 (58%), Gaps = 18/336 (5%)
 Frame = +3

Query: 183  VKEDLSELGKTLTRQLWGVASFLAPPPS-------TNAPTISSTEEGDSQTLVGIRNDFA 341
            V+EDLS   +T+ RQL GVA+FLAPPPS         AP+ SS+    S TL GIRND A
Sbjct: 25   VREDLSVFSQTIGRQLRGVAAFLAPPPSPPSSPSPVAAPSDSSSSASSSPTLRGIRNDLA 84

Query: 342  EXXXXXXXXXXXXXXNKAVNQISRLASNILQFNDDDDEGLGS--GVVGISEEALEFVREI 515
            E                 +   S L  +  Q  D DDE L    GV GI+EE L FV ++
Sbjct: 85   EIGGSF---------KSGLKTFSNLFQS--QPGDADDECLEDYDGVAGITEEVLHFVSQL 133

Query: 516  SLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHFWMIY 695
            S RP+CWTDFP ALDD DF MS  QREHAST+E LAPS ADL++ LC S M +  FWMIY
Sbjct: 134  STRPECWTDFPSALDD-DFFMSDIQREHASTIERLAPSFADLRLQLC-SYMSDGQFWMIY 191

Query: 696  FILLHPRLHKHDVELLSTSQIVETRDILLQTLQKRTNAQLQTSTADGLSLEMNENGNDIQ 875
            FILL PRL+ HD +LLST +IVE RD+LL  LQ + +A++ +  +   S E +   +   
Sbjct: 192  FILLLPRLNVHDSKLLSTPKIVEARDVLLLKLQNKRDAKVSSENSMVDSSEGSSKVSRTL 251

Query: 876  EERSSVEEKKVFSKTVIAEDQEDLDVDKWL-----EEDVETGPSFNSRNQLGNEQDVSFS 1040
             E S  +EK+V S++V    + D    +       EED +TG S  +  +L NE DVSFS
Sbjct: 252  GEDSPSQEKEVLSESVSVAHEMDKGEQESTEQLLEEEDADTGNSVGAVKRLENEDDVSFS 311

Query: 1041 DLEDDDND----TSSSNPAKNIHLSSPNDSSGWVQL 1136
            DLEDDDND     S      +I +SSPN S+ WV+L
Sbjct: 312  DLEDDDNDLSRRLSGLRLKDDIRVSSPNGSNEWVKL 347


>ref|XP_002324630.1| predicted protein [Populus trichocarpa] gi|222866064|gb|EEF03195.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  228 bits (582), Expect = 2e-57
 Identities = 141/332 (42%), Positives = 198/332 (59%), Gaps = 14/332 (4%)
 Frame = +3

Query: 183  VKEDLSELGKTLTRQLWGVASFLAPPP-----STNA--PTISSTEEGDSQTLVGIRNDFA 341
            V++DL  +G ++ RQL GVA+FLAPPP     +T A  P    +    SQ L+GIRND A
Sbjct: 25   VQDDLLVIGDSIGRQLRGVANFLAPPPPPPPSNTQAAKPQPFDSSSQSSQALLGIRNDLA 84

Query: 342  EXXXXXXXXXXXXXXNKAVNQISRLASNILQFNDDDDEGL-GSGVVGISEEALEFVREIS 518
            E              +   + +S+  SN LQF D + +   G  V GI+EE + FV+EIS
Sbjct: 85   EIG------------DSLKSGLSKFTSNFLQFKDINSKNSDGDDVAGINEEVIGFVKEIS 132

Query: 519  LRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHFWMIYF 698
            LRP+CW DFPL L + DF M+ AQREH   VEH  PSLA L+ NL  S M +  FWM+YF
Sbjct: 133  LRPECWIDFPLPLQN-DFRMTDAQREHVLNVEHFVPSLAQLRNNL-RSEMGDGRFWMVYF 190

Query: 699  ILLHPRLHKHDVELLSTSQIVETRDILLQTLQKRTNAQLQTS--TADGLSLEMNENGNDI 872
            ILL PRL++HD E+LST QIVETR++LLQ LQ + N ++++S  +  G   E+  +  +I
Sbjct: 191  ILLIPRLNEHDFEVLSTPQIVETRNLLLQKLQNKRNVKVESSKNSKSGTQGEITTSQEEI 250

Query: 873  QEERSSVEEKKVFSKTVIAEDQEDLDVDKWLEEDVETGPSFNSRNQLGNEQDVSFSDLED 1052
             E   + E  K+           + +  ++ +E ++   S ++  +L +EQDVSFSDLED
Sbjct: 251  TEIADATEGLKI----------NEENSRQFSKEKIDNSTSMDNHKKLEDEQDVSFSDLED 300

Query: 1053 DDND----TSSSNPAKNIHLSSPNDSSGWVQL 1136
            DD+D     S+S  A++I   SP+ SS W+QL
Sbjct: 301  DDSDFSIRLSASRKARSIRAPSPSGSSDWIQL 332


>ref|XP_002525300.1| conserved hypothetical protein [Ricinus communis]
            gi|223535458|gb|EEF37128.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 501

 Score =  218 bits (556), Expect = 2e-54
 Identities = 149/404 (36%), Positives = 200/404 (49%), Gaps = 86/404 (21%)
 Frame = +3

Query: 183  VKEDLSELGKTLTRQLWGVASFLAPPP---------STNAPTISSTEEGDSQTLVGIRND 335
            VKEDLSEL KTLTRQ WGVASFLAPPP         S++    S  E  D   + GIRND
Sbjct: 53   VKEDLSELTKTLTRQFWGVASFLAPPPPPDNQISDKSSDIQQSSDPESNDEDLIAGIRND 112

Query: 336  FAEXXXXXXXXXXXXXXNKAVNQISRLASNILQF---NDDDDEGLGSGVVGISEEALEFV 506
            FAE              N  V++I+++ASN LQ    +D +DE L    VG++EE + F 
Sbjct: 113  FAEIGGRFKSGISKLSSNVNVSEITKIASNFLQIGPESDINDEDLIGNAVGVTEEVVAFA 172

Query: 507  REISLRPQCWTDFPLALDDI--DFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEH 680
            R+I+  P+ W DFP+  DD+  DFDMS AQ+EHA  VE L+P LA L++ LCP  M E  
Sbjct: 173  RDIATHPETWLDFPIPDDDVFYDFDMSDAQQEHALAVERLSPRLAALRIELCPGYMSEGC 232

Query: 681  FWMIYFILLHPRLHKHDVELLSTSQIVETRDILLQTLQKRT------------------- 803
            FW IYF+LLHPRL K D ELLST Q+VE R +L   L  R                    
Sbjct: 233  FWKIYFVLLHPRLSKQDAELLSTPQVVEARAMLSHELPNRAKPTKSGWSETGSSISTKTA 292

Query: 804  -----------------NAQLQTSTADGLSLEMNEN-----------GNDIQEERSSVE- 896
                             +A L+TS+ + +S     N            ++++ E+  V+ 
Sbjct: 293  GLPHEEPLSVPSRPETESAPLKTSSIEVISSTFAANAIGNEASPSVVADELETEKHLVQS 352

Query: 897  -EKKVFSKTVIAE--------------------DQEDLDVDKWLEED--VETGPSFNSRN 1007
             E ++  K V+ E                    ++ + D D WL E+  V  GPS  +  
Sbjct: 353  TEMRIIDKAVVEEEPAYQAKHQYLSSSTSNVPDEKSEDDGDDWLNEESSVMVGPS-GTTI 411

Query: 1008 QLGNEQDVSFSDLEDDDNDTS-SSNPAKNIHLSSPNDSSGWVQL 1136
             + N++DVSFSDLE+DD +   S     +   +S  D   WVQL
Sbjct: 412  HIENDEDVSFSDLEEDDGEVPVSYKKVTSGSDASSKDPRDWVQL 455


>ref|XP_002308058.1| predicted protein [Populus trichocarpa] gi|222854034|gb|EEE91581.1|
            predicted protein [Populus trichocarpa]
          Length = 371

 Score =  218 bits (555), Expect = 2e-54
 Identities = 138/331 (41%), Positives = 194/331 (58%), Gaps = 13/331 (3%)
 Frame = +3

Query: 183  VKEDLSELGKTLTRQLWGVASFLAPPPSTNAPTISSTEEGDSQT---LVGIRNDFAEXXX 353
            VK+ LS +G ++ RQL GVA+FLAPPP +      S     SQ+   L+GIRND AE   
Sbjct: 25   VKDHLSAIGVSIGRQLRGVANFLAPPPPSRPEAAKSQPSDSSQSSRALIGIRNDLAEIGD 84

Query: 354  XXXXXXXXXXXNKAVNQISRLASNILQFNDDDDEGLGS------GVVGISEEALEFVREI 515
                             +S+L  N L+F DDD            GV GI+EE + FV+EI
Sbjct: 85   SLKYG------------LSKLTFNFLRFKDDDHNNSSQEGDYEDGVAGINEEVIGFVKEI 132

Query: 516  SLRPQCWTDFPLALDDIDFDMSSAQREHASTVEHLAPSLADLKMNLCPSNMKEEHFWMIY 695
            SLRP+ W DFPL L + DF M+ AQREHAS +E   PSLA L+ NL  S   +  FWM+Y
Sbjct: 133  SLRPEYWVDFPLPLQN-DFRMTDAQREHASNIERFVPSLAQLRYNL-RSETGDGRFWMVY 190

Query: 696  FILLHPRLHKHDVELLSTSQIVETRDILLQTLQKRTNAQLQTSTADGLSLEMNENGNDIQ 875
            FILL PRL++ D E+LST QIVETR++LL+ L+ + N +L+ S+ + +S    EN    +
Sbjct: 191  FILLIPRLNEGDFEILSTPQIVETRNVLLEKLRNKKNVKLE-SSKNSISETQGENTTSRE 249

Query: 876  EERSSVEEKKVFSKTVIAEDQEDLDVDKWLEEDVETGPSFNSRNQLGNEQDVSFSDLEDD 1055
            E    V      ++ +   D+E  +  ++L+E ++   S ++R +L  ++DVSFSDLEDD
Sbjct: 250  EVAGIV----YATEGLKINDEE--NSKQFLKEQIDNSISMDNRKKLEGKEDVSFSDLEDD 303

Query: 1056 DNDT----SSSNPAKNIHLSSPNDSSGWVQL 1136
             +D+    S+S  A++I   SP+ SS WVQL
Sbjct: 304  YSDSSTRLSASRKAQSIRAPSPSGSSDWVQL 334


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