BLASTX nr result

ID: Coptis23_contig00014088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014088
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...    97   1e-18
emb|CBI22982.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]    97   1e-18
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002863960.1| hypothetical protein ARALYDRAFT_917877 [Arab...    93   3e-17

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
           [Vitis vinifera]
          Length = 1427

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = +3

Query: 3   LPDILKKNCLHNAKRVEQSVMRAINESNYGREHIVPSIVQFGFVLLEAVEEENNQQISNK 182
           L + LK+  L   K VE++V+RA+N+SNYGREHIVPSIVQ GF+LLE+ E+ N +   N 
Sbjct: 326 LSNDLKEGYLQTVKIVEKAVLRAVNDSNYGREHIVPSIVQLGFILLESAEDRNQKAFYNS 385

Query: 183 DNLMGIEELGVQILKTLFD 239
           + LMG EELG+Q+LK+LFD
Sbjct: 386 NGLMGTEELGIQMLKSLFD 404


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = +3

Query: 3   LPDILKKNCLHNAKRVEQSVMRAINESNYGREHIVPSIVQFGFVLLEAVEEENNQQISNK 182
           L + LK+  L   K VE++V+RA+N+SNYGREHIVPSIVQ GF+LLE+ E+ N +   N 
Sbjct: 293 LSNDLKEGYLQTVKIVEKAVLRAVNDSNYGREHIVPSIVQLGFILLESAEDRNQKAFYNS 352

Query: 183 DNLMGIEELGVQILKTLFD 239
           + LMG EELG+Q+LK+LFD
Sbjct: 353 NGLMGTEELGIQMLKSLFD 371


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = +3

Query: 3   LPDILKKNCLHNAKRVEQSVMRAINESNYGREHIVPSIVQFGFVLLEAVEEENNQQISNK 182
           L + LK+  L   K VE++V+RA+N+SNYGREHIVPSIVQ GF+LLE+ E+ N +   N 
Sbjct: 336 LSNDLKEGYLQTVKIVEKAVLRAVNDSNYGREHIVPSIVQLGFILLESAEDRNQKAFYNS 395

Query: 183 DNLMGIEELGVQILKTLFD 239
           + LMG EELG+Q+LK+LFD
Sbjct: 396 NGLMGTEELGIQMLKSLFD 414


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
           predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/79 (54%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   LPDILKKNCLHNAKRVEQSVMRAINESNYGREHIVPSIVQFGFVLLEAVEEENNQQISNK 182
           LP+  K+ CL N +  E++++RA+NESNYGREHIVP+IVQF F LLE++E+ N +++ + 
Sbjct: 349 LPEDFKEECLQNVQIAEKALLRAVNESNYGREHIVPTIVQFSFQLLESLEDGNVRELWDS 408

Query: 183 DNLMGIEELGVQILKTLFD 239
           + ++GIEEL +Q+LKTLFD
Sbjct: 409 NAILGIEELSIQMLKTLFD 427


>ref|XP_002863960.1| hypothetical protein ARALYDRAFT_917877 [Arabidopsis lyrata subsp.
           lyrata] gi|297309795|gb|EFH40219.1| hypothetical protein
           ARALYDRAFT_917877 [Arabidopsis lyrata subsp. lyrata]
          Length = 1450

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/79 (51%), Positives = 63/79 (79%)
 Frame = +3

Query: 3   LPDILKKNCLHNAKRVEQSVMRAINESNYGREHIVPSIVQFGFVLLEAVEEENNQQISNK 182
           LPD LK++   +AK VE+S++RA++E  YGREH+VPS++QFGF+LLE+VEE  + +  + 
Sbjct: 352 LPDELKEDSFLHAKLVEKSLLRAVSECRYGREHVVPSVIQFGFMLLESVEESRSNEFGDS 411

Query: 183 DNLMGIEELGVQILKTLFD 239
           + ++GIE+L +QIL TLF+
Sbjct: 412 NGVLGIEKLSIQILGTLFE 430


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