BLASTX nr result

ID: Coptis23_contig00014087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014087
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   152   4e-35
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              152   4e-35
dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]        151   5e-35
ref|XP_002863960.1| hypothetical protein ARALYDRAFT_917877 [Arab...   151   5e-35
ref|NP_001119400.1| fanconi anemia group I protein [Arabidopsis ...   151   5e-35

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
           [Vitis vinifera]
          Length = 1427

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/119 (64%), Positives = 93/119 (78%)
 Frame = +1

Query: 1   LVLASKGFSKKDVIXXXXXXXXXXXXSKVSSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 180
           LVLASKGFSK++VI            SK +SIVRQVEGTVLLHVNFAVKQDPSLGQEVLG
Sbjct: 213 LVLASKGFSKREVIEGIVMFFGSKMGSKATSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 272

Query: 181 LVKSDVRAFNHFTVVVLLSIARVRRFSDGAIGILKNAVVTSYREHMFTRDCKWLPDILK 357
           LV+SD+R FN+FTV +L S+ARVRRFS+ ++GILK A++ +YR+     DCKWL + LK
Sbjct: 273 LVRSDLRVFNNFTVAILFSLARVRRFSESSMGILKAALIMAYRDFKSAEDCKWLSNDLK 331


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/119 (64%), Positives = 93/119 (78%)
 Frame = +1

Query: 1   LVLASKGFSKKDVIXXXXXXXXXXXXSKVSSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 180
           LVLASKGFSK++VI            SK +SIVRQVEGTVLLHVNFAVKQDPSLGQEVLG
Sbjct: 180 LVLASKGFSKREVIEGIVMFFGSKMGSKATSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 239

Query: 181 LVKSDVRAFNHFTVVVLLSIARVRRFSDGAIGILKNAVVTSYREHMFTRDCKWLPDILK 357
           LV+SD+R FN+FTV +L S+ARVRRFS+ ++GILK A++ +YR+     DCKWL + LK
Sbjct: 240 LVRSDLRVFNNFTVAILFSLARVRRFSESSMGILKAALIMAYRDFKSAEDCKWLSNDLK 298


>dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1487

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/119 (60%), Positives = 95/119 (79%)
 Frame = +1

Query: 1   LVLASKGFSKKDVIXXXXXXXXXXXXSKVSSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 180
           LVLASKGF K++VI            ++V+S+VRQ+EGTVLLHVNFAVKQDPSLGQEV+ 
Sbjct: 237 LVLASKGFCKREVIGGVVGYFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGQEVVA 296

Query: 181 LVKSDVRAFNHFTVVVLLSIARVRRFSDGAIGILKNAVVTSYREHMFTRDCKWLPDILK 357
           LVKSD+RAFNHFTV VL S+ARVR+F + ++G+L+ A++T+Y ++  ++DCKWLP  LK
Sbjct: 297 LVKSDLRAFNHFTVAVLFSVARVRKFGESSLGMLRTALLTAYNDYRLSKDCKWLPVELK 355


>ref|XP_002863960.1| hypothetical protein ARALYDRAFT_917877 [Arabidopsis lyrata subsp.
           lyrata] gi|297309795|gb|EFH40219.1| hypothetical protein
           ARALYDRAFT_917877 [Arabidopsis lyrata subsp. lyrata]
          Length = 1450

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/119 (60%), Positives = 94/119 (78%)
 Frame = +1

Query: 1   LVLASKGFSKKDVIXXXXXXXXXXXXSKVSSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 180
           LVLASKGF K++VI            ++V+S+VRQ+EGTVLLHVNFAVKQDPSLG EV+ 
Sbjct: 239 LVLASKGFCKREVIGGVVGFFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGLEVVA 298

Query: 181 LVKSDVRAFNHFTVVVLLSIARVRRFSDGAIGILKNAVVTSYREHMFTRDCKWLPDILK 357
           LVKSD+RAFNHFTV VL S+ARVR+F + ++GIL+ A++ +Y ++  ++DCKWLPD LK
Sbjct: 299 LVKSDLRAFNHFTVAVLFSVARVRKFGENSLGILRTALLNAYNDYRLSKDCKWLPDELK 357


>ref|NP_001119400.1| fanconi anemia group I protein [Arabidopsis thaliana]
           gi|332008389|gb|AED95772.1| fanconi anemia group I
           protein [Arabidopsis thaliana]
          Length = 1470

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/119 (60%), Positives = 95/119 (79%)
 Frame = +1

Query: 1   LVLASKGFSKKDVIXXXXXXXXXXXXSKVSSIVRQVEGTVLLHVNFAVKQDPSLGQEVLG 180
           LVLASKGF K++VI            ++V+S+VRQ+EGTVLLHVNFAVKQDPSLGQEV+ 
Sbjct: 237 LVLASKGFCKREVIGGVVGYFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGQEVVA 296

Query: 181 LVKSDVRAFNHFTVVVLLSIARVRRFSDGAIGILKNAVVTSYREHMFTRDCKWLPDILK 357
           LVKSD+RAFNHFTV VL S+ARVR+F + ++G+L+ A++T+Y ++  ++DCKWLP  LK
Sbjct: 297 LVKSDLRAFNHFTVAVLFSVARVRKFGESSLGMLRTALLTAYNDYRLSKDCKWLPVELK 355


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