BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014076
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana...   141   5e-32
gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabi...   141   5e-32
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...   140   1e-31
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   140   1e-31
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...   140   1e-31

>ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
           gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION
           INDEPENDENCE 6 [Arabidopsis thaliana]
           gi|330250911|gb|AEC06005.1| protein early flowering 8
           [Arabidopsis thaliana]
          Length = 1091

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -2

Query: 284 REYFNQGYVEQFQQILEEGSSLEIDEYYADVKYDRIAILNALGAYHSYLGKCESKGAKKD 105
           REYF QG +EQF+QILEEGSS +IDEYYADVKY+RIAILNALGAY+SYLGK E+K  +K+
Sbjct: 48  REYFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNREKE 107

Query: 104 DHFISATKYY-KASRIDIHEPSTWVGK 27
           + FISAT+YY KASRID+HEPSTWVGK
Sbjct: 108 EQFISATRYYNKASRIDMHEPSTWVGK 134


>gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
          Length = 740

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -2

Query: 284 REYFNQGYVEQFQQILEEGSSLEIDEYYADVKYDRIAILNALGAYHSYLGKCESKGAKKD 105
           REYF QG +EQF+QILEEGSS +IDEYYADVKY+RIAILNALGAY+SYLGK E+K  +K+
Sbjct: 48  REYFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNREKE 107

Query: 104 DHFISATKYY-KASRIDIHEPSTWVGK 27
           + FISAT+YY KASRID+HEPSTWVGK
Sbjct: 108 EQFISATRYYNKASRIDMHEPSTWVGK 134


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
           gi|223544778|gb|EEF46294.1| tpr repeat nuclear
           phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -2

Query: 284 REYFNQGYVEQFQQILEEGSSLEIDEYYADVKYDRIAILNALGAYHSYLGKCESKGAKKD 105
           REYF QG +EQF+QILEEGSS +IDEYYADVKYDRIAILNALGAY+SYLGK E+K  +K+
Sbjct: 48  REYFKQGKLEQFRQILEEGSSNDIDEYYADVKYDRIAILNALGAYYSYLGKIETKQREKE 107

Query: 104 DHFISATKYY-KASRIDIHEPSTWVGK 27
           ++FI AT+YY KASRID+HEPSTWVGK
Sbjct: 108 EYFIQATRYYNKASRIDMHEPSTWVGK 134


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
           CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -2

Query: 284 REYFNQGYVEQFQQILEEGSSLEIDEYYADVKYDRIAILNALGAYHSYLGKCESKGAKKD 105
           REYF QG +EQF+QILEEGSS EIDEYYADV+Y+RIAILNALGAY+SYLGK E+K  +K+
Sbjct: 48  REYFKQGKLEQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKE 107

Query: 104 DHFISATKYY-KASRIDIHEPSTWVGK 27
           +HFI AT+YY KASRID+HEPSTWVGK
Sbjct: 108 EHFILATQYYNKASRIDMHEPSTWVGK 134


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
           sativus]
          Length = 1074

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -2

Query: 284 REYFNQGYVEQFQQILEEGSSLEIDEYYADVKYDRIAILNALGAYHSYLGKCESKGAKKD 105
           REYF QG +EQF+QILEEGSS EIDEYYADV+Y+RIAILNALGAY+SYLGK E+K  +K+
Sbjct: 48  REYFKQGKLEQFRQILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKE 107

Query: 104 DHFISATKYY-KASRIDIHEPSTWVGK 27
           +HFI AT+YY KASRID+HEPSTWVGK
Sbjct: 108 EHFILATQYYNKASRIDMHEPSTWVGK 134