BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014075
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              425   e-116
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   425   e-116
emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]   415   e-113
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   409   e-112
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   405   e-111

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  425 bits (1092), Expect = e-116
 Identities = 206/267 (77%), Positives = 231/267 (86%)
 Frame = +2

Query: 161 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQVAHFITPFNYDSL 340
           GWQYQQS  TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQVAHF+TPFNYD L
Sbjct: 60  GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 119

Query: 341 ESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYVYHSL 520
           ES+HAALNG+LP DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF   YVYHS+
Sbjct: 120 ESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVYHSV 179

Query: 521 YRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVEGSG 700
           Y+LN  AMREAAK+F G+HDFS+F NAS   R  +PVK+I RFDVNE+G +LQLEVEGSG
Sbjct: 180 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSG 239

Query: 701 FLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYKEE 880
           FLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKY EE
Sbjct: 240 FLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEE 299

Query: 881 LLEPPSCCPATSFGRHSSISKCKLPFY 961
            L+ PS CPATS GRH ++ KCKLPFY
Sbjct: 300 HLQLPSGCPATSHGRHHTVRKCKLPFY 326


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  425 bits (1092), Expect = e-116
 Identities = 206/267 (77%), Positives = 231/267 (86%)
 Frame = +2

Query: 161 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQVAHFITPFNYDSL 340
           GWQYQQS  TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQVAHF+TPFNYD L
Sbjct: 70  GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 129

Query: 341 ESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYVYHSL 520
           ES+HAALNG+LP DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF   YVYHS+
Sbjct: 130 ESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVYHSV 189

Query: 521 YRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVEGSG 700
           Y+LN  AMREAAK+F G+HDFS+F NAS   R  +PVK+I RFDVNE+G +LQLEVEGSG
Sbjct: 190 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVEGSG 249

Query: 701 FLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYKEE 880
           FLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKY EE
Sbjct: 250 FLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKYNEE 309

Query: 881 LLEPPSCCPATSFGRHSSISKCKLPFY 961
            L+ PS CPATS GRH ++ KCKLPFY
Sbjct: 310 HLQLPSGCPATSHGRHHTVRKCKLPFY 336


>emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]
          Length = 403

 Score =  415 bits (1067), Expect = e-113
 Identities = 206/280 (73%), Positives = 231/280 (82%), Gaps = 13/280 (4%)
 Frame = +2

Query: 161 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQVAHFITPFNYDSL 340
           GWQYQQS  TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQVAHF+TPFNYD L
Sbjct: 124 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQVAHFLTPFNYDGL 183

Query: 341 ESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYVYHSL 520
           ES+HAALNG+LP DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF   YVYHS+
Sbjct: 184 ESIHAALNGLLPPDIRVREISPAVPEFHARFSXKSKIYHYKIYNDAVMDPFLRHYVYHSV 243

Query: 521 YRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNEL------------ 664
           Y+LN  AMREAAK+F G+HDFS+F NAS   R  +PVK+I RFDVNE+            
Sbjct: 244 YKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMMFLELIVNCIIA 303

Query: 665 -GPILQLEVEGSGFLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPP 841
            G +LQLEVEGSGFLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LSAPP
Sbjct: 304 QGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPP 363

Query: 842 HGLCLMSVKYKEELLEPPSCCPATSFGRHSSISKCKLPFY 961
           HGLCLMSVKY EE L+ PS CPATS GRH ++ KCKLPFY
Sbjct: 364 HGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPFY 403


>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score =  409 bits (1051), Expect = e-112
 Identities = 196/268 (73%), Positives = 226/268 (84%), Gaps = 1/268 (0%)
 Frame = +2

Query: 161 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQVAHFITPFNYDSL 340
           GWQYQQS  T+Q  +EKALTRAT+L+R +  LVGASRTD GVHAWGQVAHF TPFNYD+L
Sbjct: 41  GWQYQQSPPTVQCTLEKALTRATKLQRKDFCLVGASRTDAGVHAWGQVAHFFTPFNYDNL 100

Query: 341 ESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYVYHSL 520
           E LHAALNG+LP+DIRVREISPA  EFHARFSA  KIYHYKIYND IMDPFQ  + YHS+
Sbjct: 101 EELHAALNGLLPTDIRVREISPASAEFHARFSAISKIYHYKIYNDAIMDPFQRHFAYHSV 160

Query: 521 YRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVEGSG 700
           Y+LN++ MREAAKYFVG+HDFS+F+NAS       PVKH+ RFD+ E+G +LQ+EVEGSG
Sbjct: 161 YKLNSAVMREAAKYFVGKHDFSAFANASNNDGVPDPVKHVFRFDLKEMGALLQIEVEGSG 220

Query: 701 FLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYKE- 877
           FLYRQVRNMVALLLQIG+EA+PPDIVP IL S+DRK LAKY+LSAPPHGLCL+S+ Y E 
Sbjct: 221 FLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLSAPPHGLCLVSINYNES 280

Query: 878 ELLEPPSCCPATSFGRHSSISKCKLPFY 961
            LL PP C PA SFGRH +I KCK+PF+
Sbjct: 281 HLLPPPGCPPANSFGRHHTIRKCKVPFF 308


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score =  405 bits (1042), Expect = e-111
 Identities = 194/268 (72%), Positives = 226/268 (84%), Gaps = 1/268 (0%)
 Frame = +2

Query: 161 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQVAHFITPFNYDSL 340
           GWQYQ+S  T+Q  VEKALT+AT+L+R +L LVGASRTD GVHAWGQVAHF TPFNYD+L
Sbjct: 59  GWQYQESPPTVQCTVEKALTQATKLQRKDLCLVGASRTDAGVHAWGQVAHFFTPFNYDNL 118

Query: 341 ESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYVYHSL 520
           E LHAALNG+LP+DIR+REISPA  EFHARFSA+ KIYHYKIYND IMDPFQ  + YHS+
Sbjct: 119 EQLHAALNGLLPTDIRIREISPASAEFHARFSAKSKIYHYKIYNDAIMDPFQRHFAYHSV 178

Query: 521 YRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVEGSG 700
           Y+LN++ MREAA YFVG+HDFS+F+NAS   R   PVKH+ RFD+ E+G +LQLEVEGSG
Sbjct: 179 YKLNSAVMREAATYFVGKHDFSAFANASHNDRVPDPVKHVFRFDLKEMGALLQLEVEGSG 238

Query: 701 FLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKYKE- 877
           FLYRQVRNMVALLLQIG+EA+PPDIVP IL S+DRK LAKY+L APPHGLCL+S+ Y E 
Sbjct: 239 FLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLPAPPHGLCLVSINYNES 298

Query: 878 ELLEPPSCCPATSFGRHSSISKCKLPFY 961
            LL PP   PA SFGRH +I KCK+PF+
Sbjct: 299 HLLPPPESPPANSFGRHQTIRKCKVPFF 326