BLASTX nr result

ID: Coptis23_contig00014064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014064
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK82608.1| ethylene-responsive element binding protein 1 [He...   111   2e-22
ref|XP_002509442.1| Ethylene-responsive transcription factor, pu...   105   1e-20
gb|ADE41111.1| AP2 domain class transcription factor [Malus x do...    96   8e-18
ref|XP_003607496.1| Ethylene-responsive transcription factor [Me...    95   2e-17
ref|XP_004134695.1| PREDICTED: ethylene-responsive transcription...    95   2e-17

>gb|AEK82608.1| ethylene-responsive element binding protein 1 [Hevea brasiliensis]
          Length = 243

 Score =  111 bits (277), Expect = 2e-22
 Identities = 81/241 (33%), Positives = 102/241 (42%), Gaps = 16/241 (6%)
 Frame = +1

Query: 1   FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPP 180
           FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP   
Sbjct: 26  FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPPAD 85

Query: 181 ENLE---IFNSKINNA--XXXXXXXXXXXXXXREXXXXXXXXXXXXXMNRG-NGAVRFPF 342
           EN+    I N K +                  RE             +N G + AVRFPF
Sbjct: 86  ENVNKNIIVNKKNDTGANNHSPSPSSTVESSSRETPALMMESSSPLDLNLGRSAAVRFPF 145

Query: 343 NQIPLTHQLXXXXXXXXXXXXXXXXPLFFFDAIIRSEKMXXXXXXXXXXXXXARFDPVGI 522
             +P    +                 +F+FDA+++S+                 +  +  
Sbjct: 146 QPVPAVGGVFTAPVGNHQR-------VFYFDAMVKSQ-----------------YQRLLF 181

Query: 523 NYSHNQQFYH---------XXXXXXXXXXXXXXVVDFN-HHTSPPRRVLDLDLNFPPPPE 672
           ++ + +Q  H                       VVD N H  +PPR+ LD DLN PP PE
Sbjct: 182 DHQNKRQHLHDQAMSTAGNGGGGGVQSDSDSSSVVDLNQHEINPPRKSLDFDLNLPPKPE 241

Query: 673 V 675
           +
Sbjct: 242 I 242


>ref|XP_002509442.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223549341|gb|EEF50829.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 255

 Score =  105 bits (263), Expect = 1e-20
 Identities = 83/244 (34%), Positives = 98/244 (40%), Gaps = 20/244 (8%)
 Frame = +1

Query: 1   FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPP 180
           FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP   
Sbjct: 28  FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPLAC 87

Query: 181 ENL--EIF---------------NSKINNAXXXXXXXXXXXXXXREXXXXXXXXXXXXXM 309
           EN+   IF               N+  NN+              RE             +
Sbjct: 88  ENVNKNIFLSKQNDTTKVNAIANNNNNNNSNQSPSPSSTVESSSRETPALTMESSSPLDL 147

Query: 310 NRG-NGAVRFPFNQIPLTHQLXXXXXXXXXXXXXXXXPLFFFDAIIRSEKMXXXXXXXXX 486
           N G + AVRFPF  +P                      + +FDA+++S+           
Sbjct: 148 NLGPSSAVRFPFQAVP-----GLGGVFTAPVVNHHQQHVLYFDAMVKSQ----------- 191

Query: 487 XXXXARFDPVGINYSHNQQFYHXXXXXXXXXXXXXXVVDFNHH--TSPPRRVLDLDLNFP 660
                 FDP    + H QQ                 VVD N +   +PP R  D DLN P
Sbjct: 192 -YERLLFDPHQQRHQH-QQAMMFGGGGVQSDSDSSSVVDLNQNEINNPPPRSFDFDLNLP 249

Query: 661 PPPE 672
             PE
Sbjct: 250 AEPE 253


>gb|ADE41111.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 247

 Score = 96.3 bits (238), Expect = 8e-18
 Identities = 47/72 (65%), Positives = 50/72 (69%)
 Frame = +1

Query: 1   FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPP 180
           FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                GAKAKTNFP P 
Sbjct: 25  FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAIEFRGAKAKTNFPQPS 84

Query: 181 ENLEIFNSKINN 216
           EN+ +  +K NN
Sbjct: 85  ENVTLNVTKNNN 96


>ref|XP_003607496.1| Ethylene-responsive transcription factor [Medicago truncatula]
           gi|85068148|gb|ABC69353.1| ethylene-responsive
           element-binding protein [Medicago truncatula]
           gi|355508551|gb|AES89693.1| Ethylene-responsive
           transcription factor [Medicago truncatula]
          Length = 218

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 75/224 (33%), Positives = 90/224 (40%)
 Frame = +1

Query: 1   FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPP 180
           FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                G KAKTNFP PP
Sbjct: 28  FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDNAARQFRGPKAKTNFPPPP 87

Query: 181 ENLEIFNSKINNAXXXXXXXXXXXXXXREXXXXXXXXXXXXXMNRGNGAVRFPFNQIPLT 360
            +++  +   ++               RE                G+   RFPF  I   
Sbjct: 88  SDVKEDSPSQSSTVESSVPAPDREVTRREVP------------TGGSVMDRFPFLSI--- 132

Query: 361 HQLXXXXXXXXXXXXXXXXPLFFFDAIIRSEKMXXXXXXXXXXXXXARFDPVGINYSHNQ 540
            Q                 P+FF+D   R+E +              RF+P  +      
Sbjct: 133 QQQIMPFAGAGAGAVDGMVPVFFYDPAGRAEFLNQRFTN--------RFEPEPV------ 178

Query: 541 QFYHXXXXXXXXXXXXXXVVDFNHHTSPPRRVLDLDLNFPPPPE 672
           QF                VVD       P+R L+LDLN  PP E
Sbjct: 179 QFNIGFGGGVQSDSDSSSVVD-----CQPKRALNLDLNLAPPME 217


>ref|XP_004134695.1| PREDICTED: ethylene-responsive transcription factor 4-like [Cucumis
           sativus] gi|449479275|ref|XP_004155556.1| PREDICTED:
           ethylene-responsive transcription factor 4-like [Cucumis
           sativus] gi|55824383|gb|AAV66332.1| ethylene response
           factor 1 [Cucumis sativus]
          Length = 246

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 78/237 (32%), Positives = 96/237 (40%), Gaps = 15/237 (6%)
 Frame = +1

Query: 1   FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPTPP 180
           FRGVRKRPWGRYAAEIRDP KKSRVWLGTFDT                G KAKTNFP P 
Sbjct: 22  FRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDTAEEAARAYDSAARDFRGVKAKTNFPLPS 81

Query: 181 EN-LEIFNSKINNAXXXXXXXXXXXXXXREXXXXXXXXXXXXXMNRGN--------GAVR 333
           ++ L   N+KINN                              +N G+        G + 
Sbjct: 82  DDQLLNLNNKINNINNNQSPSQSSTVESSSREQALMVDSSPLNLNLGHGIGGLTNAGPIS 141

Query: 334 FPFN--QIPLTHQLXXXXXXXXXXXXXXXXPLFFFDAIIRSEKMXXXXXXXXXXXXXARF 507
           FPF   QIP+  ++                 + +FDA +R+  +               F
Sbjct: 142 FPFQRYQIPMIGEVFTRGIPPSNH-------VLYFDAALRAGMI------NSHPNQRLHF 188

Query: 508 DPVGINYSHNQQFYHXXXXXXXXXXXXXXVVDFNHHTSPPR----RVLDLDLNFPPP 666
           D +    S  ++ +               VVD N     PR      LDLDLNFPPP
Sbjct: 189 DRIREAVSDFRREF--AGSGVQSDSDSSSVVDMNGQDLKPRGGSGGRLDLDLNFPPP 243


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