BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014062
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...    59   3e-07
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = +2

Query: 2   ISWVEVGSKVHSFTVFDQLHPLKDEIYLALEQLTGQMDDDGTFLNA 139
           ISW+E+ +KVHSF+V D  HPLK++IY  LEQL GQM++D +   A
Sbjct: 565 ISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQLAGQMEEDASLFIA 610


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +2

Query: 2   ISWVEVGSKVHSFTVFDQLHPLKDEIYLALEQLTGQMDD 118
           ISW+E+ +KVHSFT  D+LHPLK+ IYLAL+QL G M++
Sbjct: 556 ISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHMEE 594


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   ISWVEVGSKVHSFTVFDQLHPLKDEIYLALEQLTGQMDDD 121
           ISW++VG+K HSF   D+LHPLK+EIYL LEQL    ++D
Sbjct: 568 ISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEED 607


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   ISWVEVGSKVHSFTVFDQLHPLKDEIYLALEQLTGQMDDD 121
           ISW++VG+K HSF   D+LHPLK+EIYL LEQL    ++D
Sbjct: 568 ISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEED 607