BLASTX nr result
ID: Coptis23_contig00014052
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014052
(439 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003535103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquiti... 57 2e-07
gb|EEH05935.1| polyubiquitin [Ajellomyces capsulatus G186AR] 56 5e-07
ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max] 55 6e-07
emb|CCD46090.1| hypothetical protein [Botryotinia fuckeliana] 55 6e-07
dbj|BAM77033.1| ubiquitin C [Homo sapiens] 55 8e-07
>ref|XP_003535103.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 226
Score = 57.4 bits (137), Expect(2) = 2e-07
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVESCDTI NVKAKI+DKEGIPPDQ L
Sbjct: 160 KTITLEVESCDTIDNVKAKIQDKEGIPPDQXRL 192
Score = 22.7 bits (47), Expect(2) = 2e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 191 RLIFAGKQLED 201
>gb|EEH05935.1| polyubiquitin [Ajellomyces capsulatus G186AR]
Length = 533
Score = 55.8 bits (133), Expect(2) = 5e-07
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -3
Query: 173 SPDFYQIWRHCVIVLHLQSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
S + I H V L ++ITLEVES DTI NVK+KI+DKEGIPPDQ L
Sbjct: 399 SSELTSISNHFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 448
Score = 22.7 bits (47), Expect(2) = 5e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 447 RLIFAGKQLED 457
>ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
Length = 614
Score = 55.5 bits (132), Expect(2) = 6e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -3
Query: 125 LQSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
L++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 243 LETITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 276
Score = 22.7 bits (47), Expect(2) = 6e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 275 RLIFAGKQLED 285
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 11 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 43
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 87 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 163 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 320 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 352
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 396 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 428
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 472 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 504
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 42 RLIFAGKQLED 52
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 118 RLIFAGKQLED 128
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 194 RLIFAGKQLED 204
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 351 RLIFAGKQLED 361
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 427 RLIFAGKQLED 437
Score = 22.7 bits (47), Expect(2) = 2e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 503 RLIFAGKQLED 513
Score = 53.1 bits (126), Expect(2) = 3e-06
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
+++TLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 548 KTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRL 580
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 579 RLIFAGKQLED 589
>emb|CCD46090.1| hypothetical protein [Botryotinia fuckeliana]
Length = 165
Score = 55.5 bits (132), Expect(2) = 6e-07
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -3
Query: 146 HCVIVLHLQSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
H V L ++ITLEVES DTI NVKAKI+DKEGIPPDQ L
Sbjct: 40 HFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 80
Score = 22.7 bits (47), Expect(2) = 6e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 79 RLIFAGKQLED 89
>dbj|BAM77033.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 55.1 bits (131), Expect(2) = 8e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 122 QSITLEVESCDTIGNVKAKIRDKEGIPPDQTDL 24
++ITLEVE CDTI NVKAKI+DKEGIPPDQ L
Sbjct: 87 KTITLEVEPCDTIENVKAKIQDKEGIPPDQQRL 119
Score = 22.7 bits (47), Expect(2) = 8e-07
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 34 KLIFAGKQFED 2
+LIFAGKQ ED
Sbjct: 118 RLIFAGKQLED 128