BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014033
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   331   3e-88
emb|CBI27542.3| unnamed protein product [Vitis vinifera]              327   5e-87
emb|CBI40086.3| unnamed protein product [Vitis vinifera]              314   3e-83
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   314   3e-83
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82

>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score =  331 bits (848), Expect = 3e-88
 Identities = 168/324 (51%), Positives = 216/324 (66%), Gaps = 16/324 (4%)
 Frame = -2

Query: 1462 NNNNEDAVGFDGWVEEKGV-------------IQIQQISNGLSPTSGAGASNIPNKEILE 1322
            ++ ++ A GF G+ EEK V             +    +S+G     GA        E   
Sbjct: 128  DDKSDIACGFGGFTEEKEVADPSYNCRFGPICVVEDVLSSGNENVCGASCQ----AEEFR 183

Query: 1321 EVSGSCSGGDA---HEALFFAFGYMSVQDLLNVERVCKSFRSAVHGDPLLWRNICIHQPL 1151
            E +GSC  GD    H A+ FA GY+ ++DLL+VERVC+S R+ V  DPLLWR+I + QPL
Sbjct: 184  EFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSVERVCRSLRATVQSDPLLWRSIHVDQPL 243

Query: 1150 NERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVPECTRISIG 971
            NERI DD L++LT RAQGNLQ L LV+C R+TD GLK VL+SNPRLT L VP CTR+SI 
Sbjct: 244  NERITDDILLQLTRRAQGNLQGLHLVECPRITDDGLKRVLESNPRLTKLCVPGCTRLSIE 303

Query: 970  GIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDKCVRSKVSKPRIYHGHS 791
            G+V+ L+A +S+G PG+KHLRIGG Y V H+HFEELK LL ID   +    KP  Y+  +
Sbjct: 304  GVVNMLRAFQSTGTPGIKHLRIGGLYGVAHKHFEELKLLLGIDIHEQKNAHKPHFYNRGN 363

Query: 790  FPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPRCVQCGRCV 611
            F    +DD  ID+E CPRC+NLRLVYDCP D C+V++++ Q CRACT+CI RCVQCGRC+
Sbjct: 364  FYLLGDDDRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRACTLCIARCVQCGRCI 423

Query: 610  LYADYVETFCLDILCLKCFELQKE 539
               +Y ETFCL+ LC  CF+ Q +
Sbjct: 424  NDGEYEETFCLEWLCSDCFKQQPQ 447


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  327 bits (838), Expect = 5e-87
 Identities = 163/299 (54%), Positives = 208/299 (69%), Gaps = 3/299 (1%)
 Frame = -2

Query: 1426 WVEEKGVIQIQQISNGLSPTSGAGASNIPNKEILEEVSGSCSGGDA---HEALFFAFGYM 1256
            W+++K       I+ G    +  GAS     E   E +GSC  GD    H A+ FA GY+
Sbjct: 98   WLDDKS-----DIACGSGNENVCGASC--QAEEFREFNGSCYDGDGAAPHAAVSFALGYL 150

Query: 1255 SVQDLLNVERVCKSFRSAVHGDPLLWRNICIHQPLNERIEDDGLVRLTGRAQGNLQSLSL 1076
             ++DLL+VERVC+S R+ V  DPLLWR+I + QPLNERI DD L++LT RAQGNLQ L L
Sbjct: 151  GLRDLLSVERVCRSLRATVQSDPLLWRSIHVDQPLNERITDDILLQLTRRAQGNLQGLHL 210

Query: 1075 VKCSRVTDVGLKCVLQSNPRLTMLNVPECTRISIGGIVDSLKALRSSGAPGLKHLRIGGR 896
            V+C R+TD GLK VL+SNPRLT L VP CTR+SI G+V+ L+A +S+G PG+KHLRIGG 
Sbjct: 211  VECPRITDDGLKRVLESNPRLTKLCVPGCTRLSIEGVVNMLRAFQSTGTPGIKHLRIGGL 270

Query: 895  YDVTHEHFEELKALLNIDKCVRSKVSKPRIYHGHSFPSYDEDDHDIDVEICPRCENLRLV 716
            Y V H+HFEELK LL ID   +    KP  Y+  +F    +DD  ID+E CPRC+NLRLV
Sbjct: 271  YGVAHKHFEELKLLLGIDIHEQKNAHKPHFYNRGNFYLLGDDDRAIDIETCPRCQNLRLV 330

Query: 715  YDCPVDCCEVRQSSPQSCRACTICIPRCVQCGRCVLYADYVETFCLDILCLKCFELQKE 539
            YDCP D C+V++++ Q CRACT+CI RCVQCGRC+   +Y ETFCL+ LC  CF+ Q +
Sbjct: 331  YDCPADGCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQQPQ 389


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  314 bits (805), Expect = 3e-83
 Identities = 151/273 (55%), Positives = 190/273 (69%), Gaps = 7/273 (2%)
 Frame = -2

Query: 1297 GDAHEALFFAFGYMSVQDLLNVERVCKSFRSAVHGDPLLWRNICIHQPLNERIEDDGLVR 1118
            G+ H+ALFF+  Y+ VQDLL VERVC+S  + V  DPLLWRNICI QPL+++I DD L++
Sbjct: 198  GEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWRNICIDQPLSDKITDDALLQ 257

Query: 1117 LTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVPECTRISIGGIVDSLKALRS 938
            LTGRAQG+LQ LSLV+C R+TD GLK VL++NPRLT L VP C R+S+  I+ +LKA +S
Sbjct: 258  LTGRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVPGCVRLSVDCILLNLKAFKS 317

Query: 937  SGAPGLKHLRIGGRYDVTHEHFEELKALLNIDKCVRSKVSKPRIYHGHSFPSYDEDDHDI 758
            +G  G+KHLRI G   VT +HFEELK LL +D   + +  KPR YHG       +DD  I
Sbjct: 318  AGTLGIKHLRISGLNGVTDQHFEELKLLLGVDNHKQLRTHKPRFYHGEQLYLSCDDDRAI 377

Query: 757  DVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPRCVQCGRCVLYADYVETFCL 578
            D+E+CPRC+ +RLVYDCP + C+ +  S Q CRACT+CI RC  CGRC+   DY ETFCL
Sbjct: 378  DIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIARCFHCGRCINDCDYEETFCL 437

Query: 577  DILCLKCF-------ELQKEERGASSNHISLDQ 500
            D+LCL CF       E Q+E    SS H    Q
Sbjct: 438  DLLCLDCFKQLLNCQERQEEMGAPSSKHTIFHQ 470


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score =  314 bits (805), Expect = 3e-83
 Identities = 151/273 (55%), Positives = 190/273 (69%), Gaps = 7/273 (2%)
 Frame = -2

Query: 1297 GDAHEALFFAFGYMSVQDLLNVERVCKSFRSAVHGDPLLWRNICIHQPLNERIEDDGLVR 1118
            G+ H+ALFF+  Y+ VQDLL VERVC+S  + V  DPLLWRNICI QPL+++I DD L++
Sbjct: 198  GEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRSDPLLWRNICIDQPLSDKITDDALLQ 257

Query: 1117 LTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLNVPECTRISIGGIVDSLKALRS 938
            LTGRAQG+LQ LSLV+C R+TD GLK VL++NPRLT L VP C R+S+  I+ +LKA +S
Sbjct: 258  LTGRAQGSLQGLSLVQCPRITDSGLKRVLENNPRLTKLCVPGCVRLSVDCILLNLKAFKS 317

Query: 937  SGAPGLKHLRIGGRYDVTHEHFEELKALLNIDKCVRSKVSKPRIYHGHSFPSYDEDDHDI 758
            +G  G+KHLRI G   VT +HFEELK LL +D   + +  KPR YHG       +DD  I
Sbjct: 318  AGTLGIKHLRISGLNGVTDQHFEELKLLLGVDNHKQLRTHKPRFYHGEQLYLSCDDDRAI 377

Query: 757  DVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICIPRCVQCGRCVLYADYVETFCL 578
            D+E+CPRC+ +RLVYDCP + C+ +  S Q CRACT+CI RC  CGRC+   DY ETFCL
Sbjct: 378  DIEVCPRCQKVRLVYDCPSESCQGKHQSAQLCRACTLCIARCFHCGRCINDCDYEETFCL 437

Query: 577  DILCLKCF-------ELQKEERGASSNHISLDQ 500
            D+LCL CF       E Q+E    SS H    Q
Sbjct: 438  DLLCLDCFKQLLNCQERQEEMGAPSSKHTIFHQ 470


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  311 bits (798), Expect = 2e-82
 Identities = 152/270 (56%), Positives = 194/270 (71%), Gaps = 10/270 (3%)
 Frame = -2

Query: 1330 ILEEVSGS-------CSGGDA---HEALFFAFGYMSVQDLLNVERVCKSFRSAVHGDPLL 1181
            +++E SG        CS GD    H A  FA GY+ V+DLL VE VC+S RS V  DPLL
Sbjct: 175  VVDESSGEFQNGHLVCSEGDKEAPHAAFAFALGYLGVRDLLVVETVCRSLRSTVQSDPLL 234

Query: 1180 WRNICIHQPLNERIEDDGLVRLTGRAQGNLQSLSLVKCSRVTDVGLKCVLQSNPRLTMLN 1001
            WR+I I QPLNE+I DD L++LT RAQGNLQ LSLV+C R+TD GLK VL++NPRLT L+
Sbjct: 235  WRSIHIDQPLNEKITDDVLLQLTNRAQGNLQCLSLVECPRITDDGLKHVLENNPRLTKLS 294

Query: 1000 VPECTRISIGGIVDSLKALRSSGAPGLKHLRIGGRYDVTHEHFEELKALLNIDKCVRSKV 821
            VP CTR+SI GIV SLKA +++G  G+KHLRIGG Y VT +HFEEL  LL  D  ++   
Sbjct: 295  VPACTRLSIEGIVTSLKAFKATGTHGVKHLRIGGLYGVTQKHFEELMFLLGPDSHIQQNA 354

Query: 820  SKPRIYHGHSFPSYDEDDHDIDVEICPRCENLRLVYDCPVDCCEVRQSSPQSCRACTICI 641
             KP  YH  +     EDD  ID+E+CPRC+NLRL+YDCPV+ C+ ++   Q+CRAC++CI
Sbjct: 355  HKPHFYHRGNLYLSCEDDRAIDIEMCPRCQNLRLIYDCPVEGCQGKEHPSQACRACSLCI 414

Query: 640  PRCVQCGRCVLYADYVETFCLDILCLKCFE 551
             RCVQCGRC+  ++Y ETFCL++LC  C++
Sbjct: 415  ARCVQCGRCINDSEYEETFCLELLCSDCWK 444