BLASTX nr result

ID: Coptis23_contig00014029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014029
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284130.1| PREDICTED: UPF0301 protein Cpha266_0885-like...   360   4e-97
ref|XP_003552547.1| PREDICTED: UPF0301 protein BT_1078-like [Gly...   357   3e-96
ref|XP_003621320.1| hypothetical protein MTR_7g011850 [Medicago ...   355   1e-95
ref|XP_003530419.1| PREDICTED: uncharacterized protein LOC100783...   353   5e-95
ref|XP_003633846.1| PREDICTED: UPF0301 protein Cpha266_0885-like...   350   4e-94

>ref|XP_002284130.1| PREDICTED: UPF0301 protein Cpha266_0885-like isoform 1 [Vitis
            vinifera]
          Length = 301

 Score =  360 bits (923), Expect = 4e-97
 Identities = 183/272 (67%), Positives = 204/272 (75%), Gaps = 2/272 (0%)
 Frame = -2

Query: 1002 PKKKFSQYTYSSAATLGHVICCRLGXXXXXXXXXXS-INPDWRSFRARLVAEERLSRPEE 826
            PK+K +Q+    A     + CC LG            I+ DWRSFRARLVA E+ SR EE
Sbjct: 29   PKRKANQFQCRKAPFPSSITCCHLGSSSSSEDADKPSISADWRSFRARLVAGEQASRLEE 88

Query: 825  VSNWVDPDTVEDHPPVIKIGEKWAHPIHEPERGCLLIATEKLDGVHIFERTVILILSTGP 646
             S+ VDPD+  DHP  I IG+KW H IHEPE+GCLLIATEKLDGVHIFERTVIL+LSTGP
Sbjct: 89   PSSLVDPDSAVDHPLPITIGDKWVHTIHEPEKGCLLIATEKLDGVHIFERTVILLLSTGP 148

Query: 645  IGPTGIILNRPSLMSIKEIRSKALDVAGTFSD-SXXXXXXXXXXXXXXLSPKEGDDGVGK 469
            +GPTGIILNRPSLMSIKE RS  LDVAGTFSD                 SPK  DDGV K
Sbjct: 149  VGPTGIILNRPSLMSIKETRSTVLDVAGTFSDMPLFFGGPIEEGLFLVNSPKGDDDGVVK 208

Query: 468  SGVFEEIMKELYYGTKESVGCAAEMVKRNVVGAGDFRFFDGYCGWEKDQLKEEIRTGYWT 289
            +G+FEE+MK LYYGTKESVGCAAEMVKRN V   DFRFFDGYCGWEK+QL++EIR GYWT
Sbjct: 209  TGLFEEVMKGLYYGTKESVGCAAEMVKRNAVAVEDFRFFDGYCGWEKEQLRDEIRAGYWT 268

Query: 288  VAACSPSVIGLHSIGSVGLWEEILGLMGQKKV 193
            VAACSPSVIGL S+GSVGLWEEI+GLMG +KV
Sbjct: 269  VAACSPSVIGLTSVGSVGLWEEIIGLMGPRKV 300


>ref|XP_003552547.1| PREDICTED: UPF0301 protein BT_1078-like [Glycine max]
          Length = 307

 Score =  357 bits (915), Expect = 3e-96
 Identities = 184/278 (66%), Positives = 213/278 (76%), Gaps = 7/278 (2%)
 Frame = -2

Query: 1002 PKKKFSQYTYSSAATLGHVICCRLGXXXXXXXXXXS-INPDWRSFRARLVAEERLSRP-E 829
            PK+    + Y  A     + CC +           S ++ DWRSFRA+LVA E+L+RP E
Sbjct: 30   PKRSSQHFHYRKARIPLPISCCHMSSPSPFDDDEKSTLSGDWRSFRAKLVAGEQLTRPVE 89

Query: 828  EVS--NWVDPDTVEDHPPVIKIGEKWAHPIHEPERGCLLIATEKLDGVHIFERTVILILS 655
            EVS  +  D D V DHPP+I IG+KWAH IHEPE+GC+LIATEKLDGVHIFERTVIL+LS
Sbjct: 90   EVSFSSVNDLDIVVDHPPLITIGDKWAHVIHEPEKGCILIATEKLDGVHIFERTVILLLS 149

Query: 654  TGPIGPTGIILNRPSLMSIKEIRSKALDVAGTFSDSXXXXXXXXXXXXXXLSPKEGD--- 484
            TGP+GP+GIILNRPSLMSIKE RS ALDV GTFS+S              LSPKEG    
Sbjct: 150  TGPLGPSGIILNRPSLMSIKETRSTALDVEGTFSNSPLFFGGPLEEGLFLLSPKEGGGGG 209

Query: 483  DGVGKSGVFEEIMKELYYGTKESVGCAAEMVKRNVVGAGDFRFFDGYCGWEKDQLKEEIR 304
            DGVGKSGVFEE+MK LYYG KESVGCAAEMVKRNV+G GDFRFFDGYCGWEK+QL++EIR
Sbjct: 210  DGVGKSGVFEEVMKGLYYGAKESVGCAAEMVKRNVIGLGDFRFFDGYCGWEKEQLRDEIR 269

Query: 303  TGYWTVAACSPSVIGLHSIGSVGLWEEILGLMGQKKVM 190
             GYWTVAACSPSV+GL S+GSVGLW+E+LGLM ++KVM
Sbjct: 270  AGYWTVAACSPSVVGLGSVGSVGLWDEVLGLMSRRKVM 307


>ref|XP_003621320.1| hypothetical protein MTR_7g011850 [Medicago truncatula]
           gi|355496335|gb|AES77538.1| hypothetical protein
           MTR_7g011850 [Medicago truncatula]
          Length = 291

 Score =  355 bits (911), Expect = 1e-95
 Identities = 178/270 (65%), Positives = 208/270 (77%), Gaps = 2/270 (0%)
 Frame = -2

Query: 996 KKFSQYTYSS--AATLGHVICCRLGXXXXXXXXXXSINPDWRSFRARLVAEERLSRPEEV 823
           K+FS   ++S       HV CC +           ++N DWRSFRA+LVA E+L +PE +
Sbjct: 23  KRFSHQQFNSRKVGIPFHVSCCNMSSSSPSDDEKPTLNTDWRSFRAKLVAGEQLLKPEFL 82

Query: 822 SNWVDPDTVEDHPPVIKIGEKWAHPIHEPERGCLLIATEKLDGVHIFERTVILILSTGPI 643
           S+  +PDTV DHPP+I IG+KWAH IHEPERGCLLIATEKLDGVHIFERTVIL+LS GPI
Sbjct: 83  SSATNPDTVVDHPPLITIGDKWAHVIHEPERGCLLIATEKLDGVHIFERTVILLLSNGPI 142

Query: 642 GPTGIILNRPSLMSIKEIRSKALDVAGTFSDSXXXXXXXXXXXXXXLSPKEGDDGVGKSG 463
           GP+GIILNRPSLMSIKE RS A DV GTFS+S              +SPK  DD VGKSG
Sbjct: 143 GPSGIILNRPSLMSIKETRSTAFDVMGTFSNSPLYFGGPLEEGLFLVSPK--DDVVGKSG 200

Query: 462 VFEEIMKELYYGTKESVGCAAEMVKRNVVGAGDFRFFDGYCGWEKDQLKEEIRTGYWTVA 283
           VF+E+MK LYYGTKESVG AAEMVKRNVV  GDFRFFDGYCGWEK+QL++EIR GYWTVA
Sbjct: 201 VFDEVMKGLYYGTKESVGLAAEMVKRNVVEVGDFRFFDGYCGWEKEQLRDEIRDGYWTVA 260

Query: 282 ACSPSVIGLHSIGSVGLWEEILGLMGQKKV 193
           ACSPSV+ L ++G VGLW+E+LGLMG++KV
Sbjct: 261 ACSPSVVDLGNVGIVGLWDEVLGLMGKRKV 290


>ref|XP_003530419.1| PREDICTED: uncharacterized protein LOC100783218 [Glycine max]
          Length = 301

 Score =  353 bits (905), Expect = 5e-95
 Identities = 174/237 (73%), Positives = 198/237 (83%), Gaps = 2/237 (0%)
 Frame = -2

Query: 894 INPDWRSFRARLVAEERLSRPEEVSNWVDPDTVEDHPPVIKIGEKWAHPIHEPERGCLLI 715
           ++ DWRSFRA+LVA E+L+R  E  N  D DTV DHPP+I IG+KWAH IHEPE GCLLI
Sbjct: 67  LSSDWRSFRAKLVAGEQLTRHVEEVN--DLDTVVDHPPLITIGDKWAHVIHEPENGCLLI 124

Query: 714 ATEKLDGVHIFERTVILILSTGPIGPTGIILNRPSLMSIKEIRSKALDVAGTFSDSXXXX 535
           ATEKLDGVHIFERTVIL+LSTGP+GP+GIILNRPSLMSIKE RS ALDV GTFS+S    
Sbjct: 125 ATEKLDGVHIFERTVILLLSTGPLGPSGIILNRPSLMSIKETRSTALDVEGTFSNSPLFF 184

Query: 534 XXXXXXXXXXLSPKEGD--DGVGKSGVFEEIMKELYYGTKESVGCAAEMVKRNVVGAGDF 361
                     LSPKEG+  DGVGKSGVFEE+MK LYYG KESVGCAAEMVKRN +G GDF
Sbjct: 185 GGPLEEGIFLLSPKEGNGGDGVGKSGVFEEVMKGLYYGAKESVGCAAEMVKRNAIGLGDF 244

Query: 360 RFFDGYCGWEKDQLKEEIRTGYWTVAACSPSVIGLHSIGSVGLWEEILGLMGQKKVM 190
           RFFDGYCGWEK+QL++EIR GYWTVAACSPSV+GL S+GS+GLW+E+LGLM ++KVM
Sbjct: 245 RFFDGYCGWEKEQLRDEIRAGYWTVAACSPSVVGLGSVGSIGLWDEVLGLMSRRKVM 301


>ref|XP_003633846.1| PREDICTED: UPF0301 protein Cpha266_0885-like isoform 2 [Vitis
           vinifera]
          Length = 259

 Score =  350 bits (897), Expect = 4e-94
 Identities = 174/235 (74%), Positives = 191/235 (81%), Gaps = 1/235 (0%)
 Frame = -2

Query: 894 INPDWRSFRARLVAEERLSRPEEVSNWVDPDTVEDHPPVIKIGEKWAHPIHEPERGCLLI 715
           I+ DWRSFRARLVA E+ SR EE S+ VDPD+  DHP  I IG+KW H IHEPE+GCLLI
Sbjct: 24  ISADWRSFRARLVAGEQASRLEEPSSLVDPDSAVDHPLPITIGDKWVHTIHEPEKGCLLI 83

Query: 714 ATEKLDGVHIFERTVILILSTGPIGPTGIILNRPSLMSIKEIRSKALDVAGTFSD-SXXX 538
           ATEKLDGVHIFERTVIL+LSTGP+GPTGIILNRPSLMSIKE RS  LDVAGTFSD     
Sbjct: 84  ATEKLDGVHIFERTVILLLSTGPVGPTGIILNRPSLMSIKETRSTVLDVAGTFSDMPLFF 143

Query: 537 XXXXXXXXXXXLSPKEGDDGVGKSGVFEEIMKELYYGTKESVGCAAEMVKRNVVGAGDFR 358
                       SPK  DDGV K+G+FEE+MK LYYGTKESVGCAAEMVKRN V   DFR
Sbjct: 144 GGPIEEGLFLVNSPKGDDDGVVKTGLFEEVMKGLYYGTKESVGCAAEMVKRNAVAVEDFR 203

Query: 357 FFDGYCGWEKDQLKEEIRTGYWTVAACSPSVIGLHSIGSVGLWEEILGLMGQKKV 193
           FFDGYCGWEK+QL++EIR GYWTVAACSPSVIGL S+GSVGLWEEI+GLMG +KV
Sbjct: 204 FFDGYCGWEKEQLRDEIRAGYWTVAACSPSVIGLTSVGSVGLWEEIIGLMGPRKV 258


Top