BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014021
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, ...   141   6e-32
gb|ACU23891.1| unknown [Glycine max]                                  141   6e-32
ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, ...   140   1e-31
ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, ...   139   2e-31
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   132   3e-29

>ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/96 (71%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +2

Query: 86  MALSIASTAVANLPLRESRQHVGRACIRVCARL-RRTNVQATKGVSSVCVPLPPDRPLWF 262
           MAL+++STA+++LP RE RQ         C  L RRT   ATKGVS+VC PLPPDRPLWF
Sbjct: 1   MALALSSTALSSLPNREIRQKGFPERTPTCLSLTRRTIANATKGVSAVCEPLPPDRPLWF 60

Query: 263 PGSSPPEWLDGSLPGDFGFDPLGLGSDPEQLRWFAQ 370
           PGSSPPEWLDGSLPGDFGFDPLGLGSDPE L+WFAQ
Sbjct: 61  PGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ 96


>gb|ACU23891.1| unknown [Glycine max]
          Length = 260

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/96 (71%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +2

Query: 86  MALSIASTAVANLPLRESRQHVGRACIRVCARL-RRTNVQATKGVSSVCVPLPPDRPLWF 262
           MAL+++STA+++LP RE RQ         C  L RRT   ATKGVS+VC PLPPDRPLWF
Sbjct: 1   MALALSSTALSSLPNREIRQKGFPERTPTCLSLTRRTIANATKGVSAVCEPLPPDRPLWF 60

Query: 263 PGSSPPEWLDGSLPGDFGFDPLGLGSDPEQLRWFAQ 370
           PGSSPPEWLDGSLPGDFGFDPLGLGSDPE L+WFAQ
Sbjct: 61  PGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ 96


>ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/96 (71%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +2

Query: 86  MALSIASTAVANLPLRESRQHVGRACIRVCARL-RRTNVQATKGVSSVCVPLPPDRPLWF 262
           MAL+++STA+++LP RE RQ         C  L RRT   ATKGVS+VC PLPPDRPLWF
Sbjct: 1   MALALSSTALSSLPNREIRQKGFPDRTPTCLSLTRRTVAYATKGVSAVCEPLPPDRPLWF 60

Query: 263 PGSSPPEWLDGSLPGDFGFDPLGLGSDPEQLRWFAQ 370
           PGSSPPEWLDGSLPGDFGFDPLGLGSDPE L+WFAQ
Sbjct: 61  PGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQ 96


>ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
           vinifera] gi|297738533|emb|CBI27778.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/96 (73%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = +2

Query: 86  MALSIASTAVANLPLRE-SRQHVGRACIRVCARLRRTNVQATKGVSSVCVPLPPDRPLWF 262
           MALSIASTA ++LP RE S +H  R          R  + ATKGVSSVC PLPPDRPLWF
Sbjct: 1   MALSIASTAFSSLPTREVSSKHFPRKLTTWLPG--RVRLNATKGVSSVCEPLPPDRPLWF 58

Query: 263 PGSSPPEWLDGSLPGDFGFDPLGLGSDPEQLRWFAQ 370
           PGSSPPEWLDGSLPGDFGFDPLGLGSDPE LRWFAQ
Sbjct: 59  PGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQ 94


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|222833488|gb|EEE71965.1| light-harvesting complex I
           protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/97 (67%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
 Frame = +2

Query: 86  MALSIASTAVANLPLR--ESRQHVGRACIRVCARLRRTNVQATKGVSSVCVPLPPDRPLW 259
           MAL+ AS+++++LP R  +  Q      I  C  ++   V ATKGVSSVC PLPPDRPLW
Sbjct: 1   MALNFASSSLSSLPTRTRDKPQKSLLGKIEKCQAVK-VRVNATKGVSSVCEPLPPDRPLW 59

Query: 260 FPGSSPPEWLDGSLPGDFGFDPLGLGSDPEQLRWFAQ 370
           FPGSSPPEWLDGSLPGDFGFDPLGLGSDPE L+WFAQ
Sbjct: 60  FPGSSPPEWLDGSLPGDFGFDPLGLGSDPESLKWFAQ 96