BLASTX nr result

ID: Coptis23_contig00014014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014014
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               76   8e-12
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    59   1e-06

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 6/142 (4%)
 Frame = +3

Query: 30   SASTVKGKQSSYWCHSAAILH---DASDLRHSH---GKTSFLQNNNHFDHGLLRSFNSST 191
            S+S V  K     C+S  +L    DAS+  +S    GK S L ++   D+  ++S  S  
Sbjct: 748  SSSAVHDKS----CYSRQLLGMPPDASNASNSFNFSGKFSCLGSSG-LDNVFVKSI-SPP 801

Query: 192  LTAAPGLPLSEASTGFTSTNSVGRPSLTHMLSNNESVDISPHFLDENLRLLALRYALDPS 371
            + +   +P    STGF+S +S+  P+LT  L   ES+ +SP+ LDEN +LLALR+ L+ S
Sbjct: 802  MGSGINVPSQAVSTGFSSASSLSVPNLTPSLPTKESIGVSPYLLDENFKLLALRHILELS 861

Query: 372  KQKHPITSAEMEQQQGRLYSLS 437
             ++H ITS  M Q++GR  S S
Sbjct: 862  NREHAITSLGMNQKEGRFSSSS 883


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
            gi|223540952|gb|EEF42510.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 903

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
 Frame = +3

Query: 12   SDSRLSSASTVKGKQSSYWCHSAAILHDASDLRHSH---GKTSFLQNNNHFDHGLLRSFN 182
            +D+  S+ S +  K  + + HS+ +  D SD  +      K     N    DH +L S +
Sbjct: 702  NDATYSNFSFMHDKNRNLY-HSSNVPPDVSDAANFSVYLQKGPCFGNGGLLDHAVLTSMD 760

Query: 183  SSTLTAAPGLPLSEASTGFTSTNSVGRPSLTHMLSNNESVDISPHFLDENLRLLALRYAL 362
            S  + ++  +P  + S   TST     P LT  + N ES+ + P+ LD+N +LLAL   L
Sbjct: 761  SRQILSSQSVP--KVSPSSTSTCI---PGLTLAMLNRESICMGPYLLDDNQKLLALGQLL 815

Query: 363  DPSKQKHPITSAEMEQQQGRLYSLSTELQGHCF 461
            D SKQ+H ++S   + +QG   + S     H F
Sbjct: 816  DLSKQQHAMSSFGRKIEQGNCSNSSNIKAQHSF 848


Top