BLASTX nr result

ID: Coptis23_contig00014009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014009
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254...   244   3e-62
emb|CBI23652.3| unnamed protein product [Vitis vinifera]              228   2e-57
ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu...   213   5e-53
ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228...   204   4e-50
ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220...   204   4e-50

>ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  244 bits (623), Expect = 3e-62
 Identities = 148/330 (44%), Positives = 196/330 (59%), Gaps = 19/330 (5%)
 Frame = +2

Query: 8    SQVPSLFQLKDIGFPSSLTALQYALKPVITSAPQPVMTXXXXXXXXXXXXXXXX------ 169
            SQ PSL  LKDI FPSSL+ALQ ALKPVIT++PQ                          
Sbjct: 744  SQGPSL--LKDIAFPSSLSALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPR 801

Query: 170  -ATPVFSKSVIDSLKKTNELLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVA 346
             A PVFS+SVIDSLKKTNELLNQEV KLQ+QV++L QK E QD E+ K ++ AQEA  +A
Sbjct: 802  SAGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLA 861

Query: 347  AQESSKSIVAKELIKSIASQLKDMTENLSPEICDSENFRAMHTEIEVLMRIDGNEASEVS 526
             +ESSK  VAKE++KSI +QLK+M + L PE+ DSE F++M T+IE  +   G +A+E S
Sbjct: 862  LEESSKCTVAKEVVKSITTQLKEMEKQLPPEVYDSETFKSMQTQIEAFLNTSGTQAAEFS 921

Query: 527  SSFPANSPEHGQQEKMVDP------SDSTGVADLSQSAE-----DDGTSVPDNKEVVRHQ 673
            SS PA+     +   + +P       ++ G+ DL+Q+ E         S+   ++ V  Q
Sbjct: 922  SSLPADLESDQKNAPVTNPLGVEDHVNAAGLTDLTQNGESSVQDSSKLSISITRDAVPQQ 981

Query: 674  SVEDVSRYPSISELK-EETEQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWR 850
            S E+ SR  +  E + E TEQFEPGVY+TFI L+ GT            + GQQAE+WW+
Sbjct: 982  STENGSRSAAKYEGEPESTEQFEPGVYVTFIALKNGTKIFKRVRFSKRKFGGQQAEEWWK 1041

Query: 851  ENKDRVFVKYRPPGVENAXXXXXXXGAPPE 940
            ENK+R+  KY PP   +A        AP +
Sbjct: 1042 ENKERLLRKYTPPASSSAPTGSSVPPAPTD 1071


>emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  228 bits (580), Expect = 2e-57
 Identities = 144/336 (42%), Positives = 188/336 (55%), Gaps = 25/336 (7%)
 Frame = +2

Query: 8    SQVPSLFQLKDIGFPSSLTALQYALKPVITSAPQPVMTXXXXXXXXXXXXXXXX------ 169
            SQ PSL  LKDI FPSSL+ALQ ALKPVIT++PQ                          
Sbjct: 741  SQGPSL--LKDIAFPSSLSALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPR 798

Query: 170  -ATPVFSKSVIDSLKKTNELLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVA 346
             A PVFS+SVIDSLKKTNELLNQEV KLQ+QV++L QK E QD E+ K ++ AQEA  +A
Sbjct: 799  SAGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLA 858

Query: 347  AQESSKSIVAKELIKSIASQ------------LKDMTENLSPEICDSENFRAMHTEIEVL 490
             +ESSK  VAKE++KSI +Q            LK+M + L PE+ DSE F++M T+IE  
Sbjct: 859  LEESSKCTVAKEVVKSITTQDYLESAHESTNLLKEMEKQLPPEVYDSETFKSMQTQIEAF 918

Query: 491  MRIDGNEASEVSSSFPANSPEHGQQEKMVDP------SDSTGVADLSQSAEDDGTSVPDN 652
            +   G +A+E SSS PA+     +   + +P       ++ G+ DL+Q+ E   +SV D+
Sbjct: 919  LNTSGTQAAEFSSSLPADLESDQKNAPVTNPLGVEDHVNAAGLTDLTQNGE---SSVQDS 975

Query: 653  KEVVRHQSVEDVSRYPSISELKEETEQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQ 832
            K                     E TEQFEPGVY+TFI L+ GT            + GQQ
Sbjct: 976  K--------------------PESTEQFEPGVYVTFIALKNGTKIFKRVRFSKRKFGGQQ 1015

Query: 833  AEDWWRENKDRVFVKYRPPGVENAXXXXXXXGAPPE 940
            AE+WW+ENK+R+  KY PP   +A        AP +
Sbjct: 1016 AEEWWKENKERLLRKYTPPASSSAPTGSSVPPAPTD 1051


>ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223526683|gb|EEF28920.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1097

 Score =  213 bits (543), Expect = 5e-53
 Identities = 132/318 (41%), Positives = 180/318 (56%), Gaps = 17/318 (5%)
 Frame = +2

Query: 2    RVSQVPSLFQLKDIGFPSSLTALQYALKPVIT-------SAPQPVMTXXXXXXXXXXXXX 160
            R SQVP+L QLKDI FPSSL+A+Q A KPV +       ++PQP+               
Sbjct: 741  RASQVPNLLQLKDIAFPSSLSAIQNAWKPVSSPVSLSPLNSPQPMGNSRPASPYSRRPSP 800

Query: 161  XXXATPVFSKSVIDSLKKTNELLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVS 340
               ++P FS+SVIDSLKKTNE+L  ++ K+Q+Q+KT  QKC+ Q+ E+ K Q++A E   
Sbjct: 801  PRISSPGFSRSVIDSLKKTNEILKNDMTKVQNQMKTFKQKCDAQETEIQKLQKEANETAL 860

Query: 341  VAAQESSKSIVAKELIKSIASQLKDMTENLSPEICDSENFRAMHTEIEVLMRI-DGNEAS 517
             A +E+SK  VAKEL+KS+A QLK+MT  L P+I D+E F+AM+ +IE  + I + +E+S
Sbjct: 861  SAKREASKCRVAKELVKSLAEQLKEMTVQLPPDIQDNETFKAMNGQIETFLHIYETSESS 920

Query: 518  EVSSSF-----PANSPEHGQQEKMVDPSDSTGVADLSQSAEDDGTSVPDNKEVV-RHQSV 679
             V+ S       A+      QE  ++   +    D S   +    SV  N E V  H S 
Sbjct: 921  SVAESLMSGQKRASDTTSNMQENRIEYQATDLSHDGSVPQDSHRLSVSSNPETVPHHNSS 980

Query: 680  EDVSRYPSISELKEE---TEQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWR 850
            E  SR    S  K+E    EQFEPGVY+TF+Q   G             +  QQAE WW+
Sbjct: 981  EHESRSHDASTSKKEGESIEQFEPGVYVTFVQRSNGVKIFKRVKFSKRRFQEQQAEVWWK 1040

Query: 851  ENKDRVFVKYRPPGVENA 904
            ENKDR+  +Y PP V  A
Sbjct: 1041 ENKDRLLRRYSPPIVNVA 1058


>ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
            sativus]
          Length = 958

 Score =  204 bits (518), Expect = 4e-50
 Identities = 126/305 (41%), Positives = 170/305 (55%), Gaps = 10/305 (3%)
 Frame = +2

Query: 2    RVSQVPSLFQLKDIGFPSSLTALQYALKPVITS--APQPVMTXXXXXXXXXXXXXXXXAT 175
            R SQVPSL QLKDI FPSSL+A+Q AL+P + +  +P P+                   T
Sbjct: 605  RASQVPSLQQLKDIAFPSSLSAIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTT 664

Query: 176  PVFSKSVIDSLKKTNELLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQE 355
            PVFSKSVIDSLKK+NE L Q+  KLQ +VK L QKC+IQ  E+   Q+ A EA S+  +E
Sbjct: 665  PVFSKSVIDSLKKSNETLVQDKSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEE 724

Query: 356  SSKSIVAKELIKSIASQLKDMTENLSPEICDSENFRAMHTEIEVLMRIDGNEASEVSSSF 535
            SSK  +AK+L+ +I  QLK+M + L PEI D ENF++M+ + E  + +   E S+ SS  
Sbjct: 725  SSKCKIAKKLVTTITEQLKEMKDKLPPEIWDGENFKSMYAQAEAFLNM--VETSKTSSL- 781

Query: 536  PANSPEHGQQEKMVDPSDSTGVADLSQSAEDDGTSVPD------NKEVVRHQSVEDVSRY 697
               S E       ++   +  + D S+  EDDG+   D      N  +   ++ E+ SR 
Sbjct: 782  -PTSHEKTNNLTALNNGSTPSLDDSSKRIEDDGSGRKDLTQENVNSLLESKKTSENGSRS 840

Query: 698  P--SISELKEETEQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVF 871
            P  S    K+  EQFEPGVY T + L  GT            +  QQAEDWW +NKDR+ 
Sbjct: 841  PLSSTEGEKQVIEQFEPGVYATLVVLSNGTKIFKRVRFSKRRFDEQQAEDWWSKNKDRLL 900

Query: 872  VKYRP 886
             +Y P
Sbjct: 901  KRYNP 905


>ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  204 bits (518), Expect = 4e-50
 Identities = 126/305 (41%), Positives = 170/305 (55%), Gaps = 10/305 (3%)
 Frame = +2

Query: 2    RVSQVPSLFQLKDIGFPSSLTALQYALKPVITS--APQPVMTXXXXXXXXXXXXXXXXAT 175
            R SQVPSL QLKDI FPSSL+A+Q AL+P + +  +P P+                   T
Sbjct: 743  RASQVPSLQQLKDIAFPSSLSAIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTT 802

Query: 176  PVFSKSVIDSLKKTNELLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQE 355
            PVFSKSVIDSLKK+NE L Q+  KLQ +VK L QKC+IQ  E+   Q+ A EA S+  +E
Sbjct: 803  PVFSKSVIDSLKKSNETLVQDKSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEE 862

Query: 356  SSKSIVAKELIKSIASQLKDMTENLSPEICDSENFRAMHTEIEVLMRIDGNEASEVSSSF 535
            SSK  +AK+L+ +I  QLK+M + L PEI D ENF++M+ + E  + +   E S+ SS  
Sbjct: 863  SSKCKIAKKLVTTITEQLKEMKDKLPPEIWDGENFKSMYAQAEAFLNM--VETSKTSSL- 919

Query: 536  PANSPEHGQQEKMVDPSDSTGVADLSQSAEDDGTSVPD------NKEVVRHQSVEDVSRY 697
               S E       ++   +  + D S+  EDDG+   D      N  +   ++ E+ SR 
Sbjct: 920  -PTSHEKTNNLTALNNGSTPSLDDSSKRIEDDGSGRKDLTQENVNSLLESKKTSENGSRS 978

Query: 698  P--SISELKEETEQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVF 871
            P  S    K+  EQFEPGVY T + L  GT            +  QQAEDWW +NKDR+ 
Sbjct: 979  PLSSTEGEKQVIEQFEPGVYATLVVLSNGTKIFKRVRFSKRRFDEQQAEDWWSKNKDRLL 1038

Query: 872  VKYRP 886
             +Y P
Sbjct: 1039 KRYNP 1043


Top