BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014007
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...   545   e-152
ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ...   529   e-148
ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucum...   510   e-142
ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glyci...   510   e-142
ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis...   507   e-141

>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
            gi|222854480|gb|EEE92027.1| f-box family protein [Populus
            trichocarpa]
          Length = 409

 Score =  545 bits (1403), Expect = e-152
 Identities = 262/410 (63%), Positives = 320/410 (78%)
 Frame = +2

Query: 164  MEQDQSCVSKKTRKRKLQQEGDGDVGFALDELNEDVLERVLSWLPTSSFFRLRSVCKRWK 343
            ME + +  S+ +RKRKL+ +  G +  ++DELNED+LERVLSWLPTS+FFR  SVCKRWK
Sbjct: 1    MEHNDNWASRASRKRKLEAQDKGMLSLSMDELNEDLLERVLSWLPTSAFFRAASVCKRWK 60

Query: 344  SVASSSSFRLACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCNSI 523
            SV+ S+SF+LACS++PSR+PWF MV+PH NQS +FD+A++SWK LN P L +++ NC+SI
Sbjct: 61   SVSDSASFKLACSEIPSREPWFLMVDPHLNQSTIFDSADRSWKKLNYPPLLKQSSNCDSI 120

Query: 524  PVAASGGLICFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXXYKLV 703
            PVAASGGL+CF     +F+V NPVTG+CRELPP+    ++ +L A+AM        YKLV
Sbjct: 121  PVAASGGLVCFHMGACNFIVCNPVTGSCRELPPVHAAQETHSLLAVAMNAQNNQS-YKLV 179

Query: 704  LVFGELPNLSINIFESGKGCWGEEIMLRRKSNDLLEPDDCGDDTLYFLSKAGDVVTTNMQ 883
            LV GELP LS  ++ S  GCWGEEI LRRK ++  E D   D+ +YFLSKAG+VV T+MQ
Sbjct: 180  LVSGELPKLSCKVYNSSTGCWGEEIFLRRKVDESQEFDSNDDNAVYFLSKAGNVVATDMQ 239

Query: 884  RSPSKQYSSVITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVAECT 1063
            RSPSKQYSSVITVKDGEE + FLSSSGTIV+CNL  KCF EYPRLLPVF EYSIDV EC 
Sbjct: 240  RSPSKQYSSVITVKDGEEIVYFLSSSGTIVSCNLTTKCFSEYPRLLPVFCEYSIDVVECK 299

Query: 1064 GEXXXXXXSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQVM 1243
            GE      SEF E+A+LR+W+F E  +SW Q+ AMPP+MSHEFYGKK DINCVG+GDQ+ 
Sbjct: 300  GEMLVVVLSEFFESANLRIWRFDESIRSWNQIVAMPPAMSHEFYGKKVDINCVGAGDQIF 359

Query: 1244 ICVNSGEFGSYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1393
            IC+NS EF  YV+CDL TNEWIELPK   +G+A EFMSAFSFEPRIEA V
Sbjct: 360  ICLNSAEFFRYVVCDLRTNEWIELPKCFKNGEAVEFMSAFSFEPRIEASV 409


>ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 412

 Score =  529 bits (1363), Expect = e-148
 Identities = 262/412 (63%), Positives = 315/412 (76%), Gaps = 2/412 (0%)
 Frame = +2

Query: 164  MEQDQSCVSKKTRKRKLQQEGDGDVGFALDELNEDVLERVLSWLPTSSFFRLRSVCKRWK 343
            ME  +   S  +RKRK Q+E    V   LDELN+D+LERVLSWLPTS+FFRLRSVCKRWK
Sbjct: 1    MEHYEFWASVPSRKRKSQEEDHDMVSICLDELNQDLLERVLSWLPTSTFFRLRSVCKRWK 60

Query: 344  SVASSSSFRLACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCP-LLGQENPNCNS 520
            SVA S+SF+ ACS+VPSRDPWFFMV+P+ N+  VFD+AE+SWK LN P  L   + NC+S
Sbjct: 61   SVADSTSFKFACSEVPSRDPWFFMVDPNLNKWTVFDSAERSWKKLNHPAFLQHSSSNCDS 120

Query: 521  IPVAASGGLICFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX-YK 697
            +PVAASGGL+CFR   G  +V NPVTG+CR +PP    + SQ+LHAIAM         YK
Sbjct: 121  MPVAASGGLVCFRKQSGALIVCNPVTGSCRGVPPAHLESGSQSLHAIAMTTYMKNQQSYK 180

Query: 698  LVLVFGELPNLSINIFESGKGCWGEEIMLRRKSNDLLEPDDCGDDTLYFLSKAGDVVTTN 877
            LVLV GELP LS  ++ S   CW EEI+L+RK ++  E D   D+ +YFLSKAG+VV T+
Sbjct: 181  LVLVSGELPKLSCRMYNSSANCWDEEILLKRKVDESQEFDAADDNAVYFLSKAGNVVATD 240

Query: 878  MQRSPSKQYSSVITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVAE 1057
            MQRSPSKQYSSV+TVK+GEE   FLSSSGTIVACNL  KCF EYPRLLPVF EYSID+ E
Sbjct: 241  MQRSPSKQYSSVMTVKNGEETAYFLSSSGTIVACNLTGKCFFEYPRLLPVFYEYSIDIVE 300

Query: 1058 CTGEXXXXXXSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQ 1237
            C GE      SEF  +ASLR+W+FSE  +SW Q+AAMPP+MSHEFYGKK DINCVG+GDQ
Sbjct: 301  CRGEMLVVLLSEFFGSASLRIWRFSEDIRSWQQIAAMPPAMSHEFYGKKVDINCVGAGDQ 360

Query: 1238 VMICVNSGEFGSYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1393
            + IC+NS EF SY++C+L  N+W+ELPK  ++G+A EFMSAFSFEPRIEA V
Sbjct: 361  IFICLNSAEFFSYIMCNLRNNDWVELPKCFMNGEAVEFMSAFSFEPRIEASV 412


>ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucumis sativus]
            gi|449524430|ref|XP_004169226.1| PREDICTED: F-box only
            protein 13-like [Cucumis sativus]
          Length = 414

 Score =  510 bits (1314), Expect = e-142
 Identities = 249/403 (61%), Positives = 319/403 (79%), Gaps = 4/403 (0%)
 Frame = +2

Query: 197  TRKRKLQQEGDGDV--GFALDELNEDVLERVLSWLPTSSFFRLRSVCKRWKSVASSSSFR 370
            TRKRK + +G+ +    F+LD+LN+D+LERVLS LPTS+FFRL SVCKRWKSVA+SSSF+
Sbjct: 14   TRKRK-RNDGENNTLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKRWKSVAASSSFK 72

Query: 371  LACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCNSIPVAASGGLI 550
             ACS + +RDPWFFMV+PH N+SIVFD+ EK+WK LN P L Q N + +S+PVAASGGLI
Sbjct: 73   SACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQ-NHHLDSMPVAASGGLI 131

Query: 551  CFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX--YKLVLVFGELP 724
            CFRNS G+FVV+NP+TG+C ELPP+D   + Q+LHAI M          YKLVLV+G++P
Sbjct: 132  CFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSEDPDGCKGSYKLVLVYGQVP 191

Query: 725  NLSINIFESGKGCWGEEIMLRRKSNDLLEPDDCGDDTLYFLSKAGDVVTTNMQRSPSKQY 904
             L   ++ S  GCW E++ L RK +D ++ +   D  +YFLS+ G+VV+TNMQRSPSKQY
Sbjct: 192  KLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVSTNMQRSPSKQY 251

Query: 905  SSVITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVAECTGEXXXXX 1084
            SSV+T ++GE+ + F+SSSGTI+ACNL +KCF+EYPRLLPVF EYSIDV EC GE     
Sbjct: 252  SSVVTNRNGEDTVYFISSSGTIMACNLNKKCFVEYPRLLPVFSEYSIDVVECQGEMLVVM 311

Query: 1085 XSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQVMICVNSGE 1264
             SEFLETASLRVW++ E  ++W Q+AA+PP+MSHE+YGKK DINCVG+GDQ++IC+NS +
Sbjct: 312  LSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGDQILICMNSND 371

Query: 1265 FGSYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1393
              +Y+LCDLV N+W ELPK  ++G+A EFMSAFSFEPRIEA V
Sbjct: 372  LYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEATV 414


>ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  510 bits (1313), Expect = e-142
 Identities = 248/401 (61%), Positives = 306/401 (76%), Gaps = 4/401 (0%)
 Frame = +2

Query: 203  KRKLQQEGDGDV--GFALDELNEDVLERVLSWLPTSSFFRLRSVCKRWKSVASSSSFRLA 376
            KRK  + G+  +   F+LD+LNED+ ER+LSWLPTS+FFRL SVCKRWKSVA+S+SF+LA
Sbjct: 13   KRKSPENGERVLFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVAASASFKLA 72

Query: 377  CSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCNSIPVAASGGLICF 556
            CS +PSRDPWF MV P+ NQS++ D+AE +WK LN P L QE  N + +PVAASGGLIC+
Sbjct: 73   CSHIPSRDPWFLMVAPNLNQSVILDSAESTWKRLNHPPLLQEESNQDCVPVAASGGLICY 132

Query: 557  RNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX-YKLVLVFGELPNLS 733
            R S G+F+VTNPVTG+CR+LPPL   +Q+Q L+AI M         +K+VLVFGELPNL 
Sbjct: 133  RKSSGNFIVTNPVTGSCRKLPPLQFASQNQPLNAIVMSTSSKDQLSFKIVLVFGELPNLL 192

Query: 734  INIFESGKGCWGEEIMLRRKSND-LLEPDDCGDDTLYFLSKAGDVVTTNMQRSPSKQYSS 910
              ++ SG  CW  E  LRRK+ D  +E D   D+ +YFLSKAG VV +NMQRSPSKQ+SS
Sbjct: 193  FKVYNSGSNCWEGETALRRKTEDNSIEYDSTDDNVVYFLSKAGFVVASNMQRSPSKQFSS 252

Query: 911  VITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVAECTGEXXXXXXS 1090
            VIT KDG+E + FLSSSG +VACNL  KCF EYPRLLPVF EYSIDV EC GE      S
Sbjct: 253  VITNKDGQEIVYFLSSSGNVVACNLTCKCFFEYPRLLPVFSEYSIDVVECNGEMLVVLLS 312

Query: 1091 EFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQVMICVNSGEFG 1270
            EFLE A+LRVWK+ E  + W Q+AAMP + SHE+YGKKADINCVG+G+Q+ IC+NS E  
Sbjct: 313  EFLEIATLRVWKYDEASRGWHQIAAMPAANSHEWYGKKADINCVGAGNQIFICLNSPELC 372

Query: 1271 SYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1393
            +YV+CDL TN+W+E PK C++G+  +FMSA SFEPRIEA V
Sbjct: 373  TYVVCDLETNKWVEFPKCCINGEVIDFMSALSFEPRIEASV 413


>ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis vinifera]
          Length = 472

 Score =  507 bits (1306), Expect = e-141
 Identities = 261/419 (62%), Positives = 311/419 (74%), Gaps = 8/419 (1%)
 Frame = +2

Query: 161  SMEQDQSCVSKK-TRKRKLQQEGDGDVGFALDELNEDVLERVLSWLPTSSFFRLRSVCKR 337
            SM+ D  C +   +RKRK          F LD+LN+D+LERVLSWLPTS FFRL SVCKR
Sbjct: 65   SMQTDGGCCAPTASRKRK----------FPLDDLNQDLLERVLSWLPTSVFFRLTSVCKR 114

Query: 338  WKSVASSSSFRLACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCN 517
            WKS+A S++F+LACSQ+PSRDPWFFMV+PH NQ +VFD+AE++WK LN P L Q NPN N
Sbjct: 115  WKSIADSATFQLACSQIPSRDPWFFMVDPHLNQWVVFDSAERNWKTLNHPPLLQLNPNIN 174

Query: 518  SIPVAASGGLICFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX-Y 694
            SIPVAA GGLICFRNS G ++V NPVTG+ R+LP LD   Q+Q+LHAIAM         Y
Sbjct: 175  SIPVAAHGGLICFRNSSGHYIVCNPVTGSTRQLPLLDKPPQNQSLHAIAMNSFSTSHHSY 234

Query: 695  KLVLVFGELPNLSINIFESGKGCWGEEIMLRRKSND-----LLEPDDCGDDTLYFLSKAG 859
            KLVLV+GEL +L+  I+ S    W EEI L RK+ +       +PDD  D+T+YFLS  G
Sbjct: 235  KLVLVYGELSSLTFRIYNSSVNLWEEEIRLSRKAENPENSFQSDPDD-DDETVYFLSITG 293

Query: 860  DVVTTNMQRSPSKQYSSVITVKDG-EEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLE 1036
            +VV TNMQRSPSKQYSSVIT KDG EE + FLSSSGT+V+CNL  K F EYP+LLP   E
Sbjct: 294  NVVATNMQRSPSKQYSSVITRKDGGEEIVYFLSSSGTVVSCNLTCKLFYEYPKLLPALSE 353

Query: 1037 YSIDVAECTGEXXXXXXSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADIN 1216
            YSID+ E  GE      SEFLETASLRVWKF E  ++W Q+AAMPP+MSHEFYGKK DIN
Sbjct: 354  YSIDIVESKGELLVVVLSEFLETASLRVWKFDEDTRAWRQIAAMPPAMSHEFYGKKVDIN 413

Query: 1217 CVGSGDQVMICVNSGEFGSYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1393
            C  +G Q++IC+NSGE   Y+LCDLV N+WIELP+   + +AKEFMSAFSFEPRIEA V
Sbjct: 414  CAAAGHQILICINSGELCRYILCDLVANQWIELPQCIKEDEAKEFMSAFSFEPRIEASV 472