BLASTX nr result

ID: Coptis23_contig00013941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013941
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus c...   137   7e-31
ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257...   135   5e-30
ref|XP_003539609.1| PREDICTED: uncharacterized protein LOC100818...   134   1e-29
ref|XP_003541831.1| PREDICTED: uncharacterized protein LOC100801...   132   2e-29

>ref|XP_002316801.1| predicted protein [Populus trichocarpa] gi|222859866|gb|EEE97413.1|
            predicted protein [Populus trichocarpa]
          Length = 773

 Score =  139 bits (349), Expect = 3e-31
 Identities = 82/153 (53%), Positives = 101/153 (66%), Gaps = 25/153 (16%)
 Frame = +2

Query: 77   LPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQ--IVHIDGGAESSR--SKDIK-- 238
            LPDCLL+M+ EPKLSMEVSKETWVCSTDFI+  P+    +   +G  E  +  S DIK  
Sbjct: 615  LPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPVSKTNGKDEPKKRVSIDIKPA 674

Query: 239  -------SSNPAQQLNQQSC-HPVP---------SMTTMIEQKLMNAVAYEPFVLTRCKS 367
                   +SN  QQ  + SC +P           SM+TMIEQKL+ A AYEPFVLTRCKS
Sbjct: 675  QVYNNGNNSNSLQQPRRSSCSYPAKPPARCAGTESMSTMIEQKLVGAKAYEPFVLTRCKS 734

Query: 368  EPLRTSARLVPEACSWKNRQLEP--PSYEAGVG 460
            EP+R++++L PEAC WKNR+LEP  P+   GVG
Sbjct: 735  EPMRSASKLAPEACFWKNRKLEPHRPAATLGVG 767


>ref|XP_002523264.1| hypothetical protein RCOM_0649410 [Ricinus communis]
            gi|223537477|gb|EEF39103.1| hypothetical protein
            RCOM_0649410 [Ricinus communis]
          Length = 731

 Score =  137 bits (346), Expect = 7e-31
 Identities = 84/165 (50%), Positives = 104/165 (63%), Gaps = 27/165 (16%)
 Frame = +2

Query: 50   KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQ----QIVHIDGGAES 217
            K  E ++  LPDCLL+M+ EPKLSMEVSKETWVCSTDFI+  P+     Q+   DGG + 
Sbjct: 567  KERENQQPLLPDCLLLMMCEPKLSMEVSKETWVCSTDFIRWLPEHSRPPQVKKRDGGDQP 626

Query: 218  SRSKDIKSS------NPAQQLNQQSC-HPVP---------SMTTMIEQKLMNAV-AYEPF 346
             +   I ++      NP QQ  + SC +P           SMTT IE+KL+    AYEPF
Sbjct: 627  KKRISIDNNPPSVQGNPPQQPPRSSCSYPAKPPSRAAGAESMTTAIERKLVGTTKAYEPF 686

Query: 347  VLTRCKSEPLRTSARLVPEACSWKNRQLEP--PSY----EAGVGF 463
            VLTRCKSEP+R++A+L PE C WKNRQLEP  P+      AGVGF
Sbjct: 687  VLTRCKSEPMRSAAKLAPEPCFWKNRQLEPHRPATLGVGAAGVGF 731


>ref|XP_002282849.2| PREDICTED: uncharacterized protein LOC100257171 [Vitis vinifera]
          Length = 741

 Score =  135 bits (339), Expect = 5e-30
 Identities = 77/142 (54%), Positives = 94/142 (66%), Gaps = 13/142 (9%)
 Frame = +2

Query: 77   LPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQIVHIDGGAESSRSKDIKSSNPAQ 256
            LPDCLL+M+ EPKLSMEVSKETWV S DFI+  P +++V  + G +  +++    SNP Q
Sbjct: 601  LPDCLLLMMCEPKLSMEVSKETWVNSADFIRWHP-EKLVKPNNGQDQPKTRLSTDSNPTQ 659

Query: 257  QLNQQ----SCH------PVPSMTTMIEQKLMNAVAYEPFVLTRCKSEPLRTSARLVPEA 406
            Q   Q    SC          SM TMIEQK +NA AYEPFVLTRCKSEP+R+SA+L  +A
Sbjct: 660  QQLHQPPRSSCSFPAAAAAGASMATMIEQKFVNAAAYEPFVLTRCKSEPMRSSAKLASDA 719

Query: 407  CSWKNRQLEPPSYE---AGVGF 463
            C WKN +LEP       AGVGF
Sbjct: 720  CFWKNPKLEPHRPRVGAAGVGF 741


>ref|XP_003539609.1| PREDICTED: uncharacterized protein LOC100818049 [Glycine max]
          Length = 715

 Score =  134 bits (336), Expect = 1e-29
 Identities = 76/155 (49%), Positives = 98/155 (63%), Gaps = 18/155 (11%)
 Frame = +2

Query: 50   KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQIV-----HIDGGAE 214
            K  E+++  LP+CLL+M+ EPKLSMEVSKETWVCSTDFI+  P++         + G   
Sbjct: 555  KCQEREREGLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPAAGGGSKRVAGETF 614

Query: 215  SSRSKDIKSSNPAQQLNQQSCHPVP--------SMTTMIEQKLMNAVA---YEPFVLTRC 361
            +      K   P  QL + SC  +P        SM  MIEQKL+ + +   YEPFVLTRC
Sbjct: 615  TKSKPKPKPPQPMMQLPRSSC-SLPAAGGSAGVSMAAMIEQKLVGSKSGNGYEPFVLTRC 673

Query: 362  KSEPLRTSARLVPEACSWKNRQLE--PPSYEAGVG 460
            KSEP+R+SA+L PEAC W NR+LE  PP+ + GVG
Sbjct: 674  KSEPMRSSAKLAPEACFWNNRKLEPHPPAAQLGVG 708


>ref|XP_003541831.1| PREDICTED: uncharacterized protein LOC100801731 [Glycine max]
          Length = 728

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/152 (51%), Positives = 97/152 (63%), Gaps = 15/152 (9%)
 Frame = +2

Query: 50   KVHEKKKTELPDCLLMMLWEPKLSMEVSKETWVCSTDFIQRRPKQQIVHIDGG---AESS 220
            K  E+ +  LP+CLL+M+ EPKLSMEVSKETWVCSTDFI+  P++      GG   A  +
Sbjct: 572  KREERDREALPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERTAA--GGGNRVAAET 629

Query: 221  RSKDIKSSNPAQQLNQQSCH-PVP------SMTTMIEQKLMNAVA---YEPFVLTRCKSE 370
             +K      P  Q  + SC  P        SM  MIEQKLM + +   YEPFVLTRCKSE
Sbjct: 630  LAKSKPKPKPMMQPPRSSCSFPAARGGAGVSMAAMIEQKLMGSKSGNGYEPFVLTRCKSE 689

Query: 371  PLRTSARLVPEACSWKNRQLE--PPSYEAGVG 460
            P+R+SA+L PEAC W NR+LE  PP+ + GVG
Sbjct: 690  PMRSSAKLAPEACFWNNRKLEPHPPAAQLGVG 721


Top