BLASTX nr result

ID: Coptis23_contig00013808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013808
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37641.3| unnamed protein product [Vitis vinifera]              234   3e-59
ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like ...   234   3e-59
ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis...   229   6e-58
emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]   229   6e-58
emb|CBI37640.3| unnamed protein product [Vitis vinifera]              224   2e-56

>emb|CBI37641.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  234 bits (596), Expect = 3e-59
 Identities = 130/286 (45%), Positives = 164/286 (57%)
 Frame = -1

Query: 1013 TICEQLVEMHKNVSAQQDLSGSRNFPFLGNIKHMTMSGMCILSSYLSGGRNFPFLGXXXX 834
            TICEQLVEMHK++++ QDL+G                                       
Sbjct: 21   TICEQLVEMHKSLTSHQDLAG--------------------------------------- 41

Query: 833  SGVKLGNLYCDSVMTSAGNKMTSRQRWTPTTAQLLILERIFDEGIGTPSKQKIKEVTNEL 654
              V+LGNLYCD +MTS G+K+T+RQRWTPT  QL ILERIFD+G GTPSKQKIKE+T++L
Sbjct: 42   --VRLGNLYCDPLMTSTGHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDL 99

Query: 653  MQHGQISETNVYNWFQNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGI 474
             QHGQISETNVYNWFQNRRARSKRKQ+VT PN+A+SEVETE + PK+KKT SEN      
Sbjct: 100  SQHGQISETNVYNWFQNRRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQN 159

Query: 473  MVPRPDEICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSQDPRPHTAAIMFPSDGCSK 294
               RP+++C                                 D + H    +FPSDG  K
Sbjct: 160  SASRPEDLCFQNPELGSRLDFL--------------------DQQTHKEEAIFPSDGGIK 199

Query: 293  STGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFSSYRQGEDYDMIG 156
             +G++  + FY      +  D++ GKME  GS++ Y+Q EDY M G
Sbjct: 200  PSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQQTEDYSMSG 239


>ref|XP_002279942.1| PREDICTED: WUSCHEL-related homeobox 13-like isoform 1 [Vitis
            vinifera]
          Length = 281

 Score =  234 bits (596), Expect = 3e-59
 Identities = 130/286 (45%), Positives = 164/286 (57%)
 Frame = -1

Query: 1013 TICEQLVEMHKNVSAQQDLSGSRNFPFLGNIKHMTMSGMCILSSYLSGGRNFPFLGXXXX 834
            TICEQLVEMHK++++ QDL+G                                       
Sbjct: 63   TICEQLVEMHKSLTSHQDLAG--------------------------------------- 83

Query: 833  SGVKLGNLYCDSVMTSAGNKMTSRQRWTPTTAQLLILERIFDEGIGTPSKQKIKEVTNEL 654
              V+LGNLYCD +MTS G+K+T+RQRWTPT  QL ILERIFD+G GTPSKQKIKE+T++L
Sbjct: 84   --VRLGNLYCDPLMTSTGHKITARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDL 141

Query: 653  MQHGQISETNVYNWFQNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGI 474
             QHGQISETNVYNWFQNRRARSKRKQ+VT PN+A+SEVETE + PK+KKT SEN      
Sbjct: 142  SQHGQISETNVYNWFQNRRARSKRKQLVTAPNNADSEVETEVESPKDKKTKSENFLPQQN 201

Query: 473  MVPRPDEICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSQDPRPHTAAIMFPSDGCSK 294
               RP+++C                                 D + H    +FPSDG  K
Sbjct: 202  SASRPEDLCFQNPELGSRLDFL--------------------DQQTHKEEAIFPSDGGIK 241

Query: 293  STGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFSSYRQGEDYDMIG 156
             +G++  + FY      +  D++ GKME  GS++ Y+Q EDY M G
Sbjct: 242  PSGNLSPVAFY------AGNDHQIGKMEVPGSYNPYQQTEDYSMSG 281


>ref|XP_002272420.1| PREDICTED: WUSCHEL-related homeobox 8 [Vitis vinifera]
            gi|297745565|emb|CBI40730.3| unnamed protein product
            [Vitis vinifera]
          Length = 279

 Score =  229 bits (585), Expect = 6e-58
 Identities = 134/287 (46%), Positives = 162/287 (56%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1013 TICEQLVEMHKNVSAQQDLSGSRNFPFLGNIKHMTMSGMCILSSYLSGGRNFPFLGXXXX 834
            TICEQLVEMHK ++ QQDL+G R                                     
Sbjct: 54   TICEQLVEMHKAITTQQDLAGMR------------------------------------- 76

Query: 833  SGVKLGNLYCDSVMTSAGNKMTSRQRWTPTTAQLLILERIFDEGIGTPSKQKIKEVTNEL 654
                LGN+YCD +M SAG+K++SRQRWTPT  QL ILERIFD+G GTPSKQKIKE+T EL
Sbjct: 77   ----LGNIYCDPLMASAGHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTEL 132

Query: 653  MQHGQISETNVYNWFQNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGI 474
             QHGQISETNVYNWFQNRRARSKRKQ V  PN+A+SEVET+ + PKEKKT  +NI S+  
Sbjct: 133  TQHGQISETNVYNWFQNRRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHEN 192

Query: 473  MVPRPDEICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSQDPRPHTAAIMFPSDGCSK 294
                 + I                                  D +P+    MFPSD   +
Sbjct: 193  SALGTENIYFQSPEMGSEMHCL--------------------DTQPNKGEPMFPSDRSLR 232

Query: 293  STGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFSSYRQ-GEDYDMIG 156
            S+GS+G+   YE+ + N R D   GK+E  GSFS YRQ GE +DM+G
Sbjct: 233  SSGSLGHSSLYETGVPNPRMDQLIGKVEVPGSFSPYRQGGEGFDMVG 279


>emb|CAN84082.1| hypothetical protein VITISV_018997 [Vitis vinifera]
          Length = 243

 Score =  229 bits (585), Expect = 6e-58
 Identities = 134/287 (46%), Positives = 162/287 (56%), Gaps = 1/287 (0%)
 Frame = -1

Query: 1013 TICEQLVEMHKNVSAQQDLSGSRNFPFLGNIKHMTMSGMCILSSYLSGGRNFPFLGXXXX 834
            TICEQLVEMHK ++ QQDL+G R                                     
Sbjct: 18   TICEQLVEMHKAITTQQDLAGMR------------------------------------- 40

Query: 833  SGVKLGNLYCDSVMTSAGNKMTSRQRWTPTTAQLLILERIFDEGIGTPSKQKIKEVTNEL 654
                LGN+YCD +M SAG+K++SRQRWTPT  QL ILERIFD+G GTPSKQKIKE+T EL
Sbjct: 41   ----LGNIYCDPLMASAGHKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTEL 96

Query: 653  MQHGQISETNVYNWFQNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGI 474
             QHGQISETNVYNWFQNRRARSKRKQ V  PN+A+SEVET+ + PKEKKT  +NI S+  
Sbjct: 97   TQHGQISETNVYNWFQNRRARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHEN 156

Query: 473  MVPRPDEICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSQDPRPHTAAIMFPSDGCSK 294
                 + I                                  D +P+    MFPSD   +
Sbjct: 157  SALGTENIYFQSPEMGSEMHCL--------------------DTQPNKGEPMFPSDHSLR 196

Query: 293  STGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFSSYRQ-GEDYDMIG 156
            S+GS+G+   YE+ + N R D   GK+E  GSFS YRQ GE +DM+G
Sbjct: 197  SSGSLGHSSLYEAGVPNPRMDQLIGKVEVPGSFSPYRQGGEGFDMVG 243


>emb|CBI37640.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  224 bits (572), Expect = 2e-56
 Identities = 125/286 (43%), Positives = 161/286 (56%)
 Frame = -1

Query: 1013 TICEQLVEMHKNVSAQQDLSGSRNFPFLGNIKHMTMSGMCILSSYLSGGRNFPFLGXXXX 834
            TICEQLVEMHK++++ QDL+G                                       
Sbjct: 18   TICEQLVEMHKSLTSHQDLAG--------------------------------------- 38

Query: 833  SGVKLGNLYCDSVMTSAGNKMTSRQRWTPTTAQLLILERIFDEGIGTPSKQKIKEVTNEL 654
              V+LGNLYCD +MTS G+K+++RQRWTPT  QL ILERIFD+G GTPSKQKIKE+T++L
Sbjct: 39   --VRLGNLYCDPLMTSTGHKISARQRWTPTPVQLQILERIFDQGYGTPSKQKIKEITSDL 96

Query: 653  MQHGQISETNVYNWFQNRRARSKRKQMVTPPNSAESEVETEDDFPKEKKTNSENINSNGI 474
             QHGQISETNVYNWFQNRRA+SKRKQ++T PN+AESEV TE + PK++KT SEN      
Sbjct: 97   SQHGQISETNVYNWFQNRRAQSKRKQLITMPNNAESEVATEVESPKDQKTKSENFLPQQN 156

Query: 473  MVPRPDEICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSQDPRPHTAAIMFPSDGCSK 294
               RP+++C                                 D + H    +FPSDG  K
Sbjct: 157  SASRPEDLCFQNPEIGSRLHFL--------------------DQQTHKEENIFPSDGGIK 196

Query: 293  STGSVGNIPFYESLLSNSRTDYRFGKMEEAGSFSSYRQGEDYDMIG 156
             +G+   + FY      +  D++ GKME  GS++ Y+  EDY M G
Sbjct: 197  PSGNPSQVAFY------AGNDHQIGKMEVPGSYNPYQHTEDYSMTG 236


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