BLASTX nr result

ID: Coptis23_contig00013500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013500
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39250.3| unnamed protein product [Vitis vinifera]              453   e-125
ref|XP_002282092.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   453   e-125
gb|ABK96037.1| unknown [Populus trichocarpa]                          441   e-121
ref|XP_002327369.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_003634565.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   437   e-120

>emb|CBI39250.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  453 bits (1166), Expect = e-125
 Identities = 227/344 (65%), Positives = 272/344 (79%)
 Frame = +2

Query: 110  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIRXXXXXXXXXXXXIGDYQIGVVKMC 289
            V ++N  ITR+LFCGP+FPAS  YTR+YLQ+YPFI+            I DY + +VK  
Sbjct: 2    VKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSM 61

Query: 290  RFDAQLISRANKMKLMMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 469
            R D+ +ISRANKMKL+MQFGVGLEGVD++AAT+CGIKVARI     GN+ASCAEMAIYLM
Sbjct: 62   RLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLM 121

Query: 470  LGLLRKQNEMEISVKQRRLGEPIGDTLLGKTVYIMGFGNIGTDLAIRLRPFGVKILATKR 649
            LGLLRKQ EM+IS+KQ+ +GEPIGDTL GKTV+IMGFGNIG DLA RLRPFGV+ILATKR
Sbjct: 122  LGLLRKQKEMQISLKQKIVGEPIGDTLFGKTVFIMGFGNIGIDLAKRLRPFGVRILATKR 181

Query: 650  NWASNSLDSSQPNGSCVPSQEFDHGHLVDKKGGPEDIFEFAKEADIVAPCLLLNSETAGI 829
            +WAS SL+SSQ NG   P+   D   LVD+KGG E I++FA  ADIV  CL LNSETA I
Sbjct: 182  SWASQSLNSSQSNGFPTPNDNAD--ELVDEKGGHEAIYDFASSADIVVCCLRLNSETAAI 239

Query: 830  VNEKFLSSMKKGALLVNVARGGILDYKAVAXXXXXXXXXXXXIDVAWTEPFNPDDKILKF 1009
            +++KF+SSM+KG LL+N+ARGG++DY+AVA             DV WTEPFNPDD+ILKF
Sbjct: 240  IDKKFISSMRKGGLLINIARGGLMDYEAVAYHLESGHLGGLGTDVTWTEPFNPDDQILKF 299

Query: 1010 QNVLITPHVAGVTEYAYRTMAKVVGDTALQLHAGTALTEVEFVN 1141
            QNV++TPHVAGVTE++YR+MAKVVGD ALQLHAG  LT +EFVN
Sbjct: 300  QNVIVTPHVAGVTEHSYRSMAKVVGDIALQLHAGAPLTGLEFVN 343


>ref|XP_002282092.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform 1 [Vitis
            vinifera]
          Length = 373

 Score =  453 bits (1166), Expect = e-125
 Identities = 227/344 (65%), Positives = 272/344 (79%)
 Frame = +2

Query: 110  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIRXXXXXXXXXXXXIGDYQIGVVKMC 289
            V ++N  ITR+LFCGP+FPAS  YTR+YLQ+YPFI+            I DY + +VK  
Sbjct: 32   VKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSM 91

Query: 290  RFDAQLISRANKMKLMMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 469
            R D+ +ISRANKMKL+MQFGVGLEGVD++AAT+CGIKVARI     GN+ASCAEMAIYLM
Sbjct: 92   RLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLM 151

Query: 470  LGLLRKQNEMEISVKQRRLGEPIGDTLLGKTVYIMGFGNIGTDLAIRLRPFGVKILATKR 649
            LGLLRKQ EM+IS+KQ+ +GEPIGDTL GKTV+IMGFGNIG DLA RLRPFGV+ILATKR
Sbjct: 152  LGLLRKQKEMQISLKQKIVGEPIGDTLFGKTVFIMGFGNIGIDLAKRLRPFGVRILATKR 211

Query: 650  NWASNSLDSSQPNGSCVPSQEFDHGHLVDKKGGPEDIFEFAKEADIVAPCLLLNSETAGI 829
            +WAS SL+SSQ NG   P+   D   LVD+KGG E I++FA  ADIV  CL LNSETA I
Sbjct: 212  SWASQSLNSSQSNGFPTPNDNAD--ELVDEKGGHEAIYDFASSADIVVCCLRLNSETAAI 269

Query: 830  VNEKFLSSMKKGALLVNVARGGILDYKAVAXXXXXXXXXXXXIDVAWTEPFNPDDKILKF 1009
            +++KF+SSM+KG LL+N+ARGG++DY+AVA             DV WTEPFNPDD+ILKF
Sbjct: 270  IDKKFISSMRKGGLLINIARGGLMDYEAVAYHLESGHLGGLGTDVTWTEPFNPDDQILKF 329

Query: 1010 QNVLITPHVAGVTEYAYRTMAKVVGDTALQLHAGTALTEVEFVN 1141
            QNV++TPHVAGVTE++YR+MAKVVGD ALQLHAG  LT +EFVN
Sbjct: 330  QNVIVTPHVAGVTEHSYRSMAKVVGDIALQLHAGAPLTGLEFVN 373


>gb|ABK96037.1| unknown [Populus trichocarpa]
          Length = 343

 Score =  441 bits (1134), Expect = e-121
 Identities = 221/344 (64%), Positives = 269/344 (78%)
 Frame = +2

Query: 110  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIRXXXXXXXXXXXXIGDYQIGVVKMC 289
            VG ++ +ITRVLFCGP+FPAS  YT++YLQ YPFI+            I +Y I +VK  
Sbjct: 2    VGNSDKHITRVLFCGPYFPASHQYTKEYLQKYPFIQVDDVPLAVVPDVISNYNICIVKNM 61

Query: 290  RFDAQLISRANKMKLMMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 469
            R  + +ISRA +MKL+MQFGVG+EGVD+DAAT+ GIKVARIPG+  GN+ASCAEMAIYLM
Sbjct: 62   RLTSNIISRATQMKLIMQFGVGIEGVDIDAATKYGIKVARIPGDATGNAASCAEMAIYLM 121

Query: 470  LGLLRKQNEMEISVKQRRLGEPIGDTLLGKTVYIMGFGNIGTDLAIRLRPFGVKILATKR 649
            LGLLRKQNEM+IS+KQ+RLGEP G+TL GKTV+IMGFGNIG DLA RLRPFGVKI+ATKR
Sbjct: 122  LGLLRKQNEMQISIKQKRLGEPAGETLFGKTVFIMGFGNIGIDLAKRLRPFGVKIIATKR 181

Query: 650  NWASNSLDSSQPNGSCVPSQEFDHGHLVDKKGGPEDIFEFAKEADIVAPCLLLNSETAGI 829
            +WA +S  S Q NG  + +   D  +LVD+KG  EDI++FA E+DIV  CL +N ETAGI
Sbjct: 182  SWALHSEGSLQSNGFLIENGTND--NLVDEKGSHEDIYKFAGESDIVVCCLRMNKETAGI 239

Query: 830  VNEKFLSSMKKGALLVNVARGGILDYKAVAXXXXXXXXXXXXIDVAWTEPFNPDDKILKF 1009
            VN+ F+SSMKKG+LLVN+ARGG+LDY AV             IDVAWTEPF+PDD ILKF
Sbjct: 240  VNKSFISSMKKGSLLVNIARGGLLDYNAVVHHLESGHLGGLGIDVAWTEPFDPDDPILKF 299

Query: 1010 QNVLITPHVAGVTEYAYRTMAKVVGDTALQLHAGTALTEVEFVN 1141
             NV+I+PHVAGVTE++YR+M+KVVGD ALQLH+G  LT +E VN
Sbjct: 300  NNVIISPHVAGVTEHSYRSMSKVVGDVALQLHSGNPLTGIEIVN 343


>ref|XP_002327369.1| predicted protein [Populus trichocarpa] gi|222835739|gb|EEE74174.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  439 bits (1129), Expect = e-121
 Identities = 220/344 (63%), Positives = 269/344 (78%)
 Frame = +2

Query: 110  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIRXXXXXXXXXXXXIGDYQIGVVKMC 289
            VG ++ +ITRVLFCGP+FPAS  YT++YLQ YPFI+            I +Y I +VK  
Sbjct: 2    VGNSDKHITRVLFCGPYFPASHQYTKEYLQKYPFIQVDDVPLAVVPDVISNYNICIVKNM 61

Query: 290  RFDAQLISRANKMKLMMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 469
            R  + +ISRA +MKL+MQFGVG+EGVD+DAAT+ GIKVARIPG+  GN+ASCAEMAIYLM
Sbjct: 62   RLTSNIISRATQMKLIMQFGVGIEGVDIDAATKYGIKVARIPGDATGNAASCAEMAIYLM 121

Query: 470  LGLLRKQNEMEISVKQRRLGEPIGDTLLGKTVYIMGFGNIGTDLAIRLRPFGVKILATKR 649
            LGLLRKQNEM+IS+KQ+RLGEP G+TL GKTV+IMGFGNIG DLA RLRPFGVKI+ATKR
Sbjct: 122  LGLLRKQNEMQISIKQKRLGEPAGETLFGKTVFIMGFGNIGIDLAKRLRPFGVKIIATKR 181

Query: 650  NWASNSLDSSQPNGSCVPSQEFDHGHLVDKKGGPEDIFEFAKEADIVAPCLLLNSETAGI 829
            +WA +S  S Q NG  + +   D  +LVD+KG  EDI++FA E+DIV  CL +N ETAGI
Sbjct: 182  SWALHSEGSLQSNGFLIENGTND--NLVDEKGSHEDIYKFAGESDIVVCCLRMNKETAGI 239

Query: 830  VNEKFLSSMKKGALLVNVARGGILDYKAVAXXXXXXXXXXXXIDVAWTEPFNPDDKILKF 1009
            VN+ F+SSMKKG+LLVN+ARGG+L+Y AV             IDVAWTEPF+PDD ILKF
Sbjct: 240  VNKSFISSMKKGSLLVNIARGGLLEYDAVVHHLESGHLGGLGIDVAWTEPFDPDDPILKF 299

Query: 1010 QNVLITPHVAGVTEYAYRTMAKVVGDTALQLHAGTALTEVEFVN 1141
             NV+I+PHVAGVTE++YR+M+KVVGD ALQLH+G  LT +E VN
Sbjct: 300  NNVIISPHVAGVTEHSYRSMSKVVGDVALQLHSGNPLTGIEIVN 343


>ref|XP_003634565.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform 2 [Vitis
            vinifera]
          Length = 333

 Score =  437 bits (1125), Expect = e-120
 Identities = 222/344 (64%), Positives = 266/344 (77%)
 Frame = +2

Query: 110  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIRXXXXXXXXXXXXIGDYQIGVVKMC 289
            V ++N  ITR+LFCGP+FPAS  YTR+YLQ+YPFI+            I DY + +VK  
Sbjct: 2    VKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSM 61

Query: 290  RFDAQLISRANKMKLMMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 469
            R D+ +ISRANKMKL+MQFGVGLEGVD++AAT+CGIKVARI     GN+ASCAEMAIYLM
Sbjct: 62   RLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLM 121

Query: 470  LGLLRKQNEMEISVKQRRLGEPIGDTLLGKTVYIMGFGNIGTDLAIRLRPFGVKILATKR 649
            LGLLRKQ EM+IS+KQ+ +GEPIGDTL GKTV+IMGFGNIG DLA RLRPFGV+ILATKR
Sbjct: 122  LGLLRKQKEMQISLKQKIVGEPIGDTLFGKTVFIMGFGNIGIDLAKRLRPFGVRILATKR 181

Query: 650  NWASNSLDSSQPNGSCVPSQEFDHGHLVDKKGGPEDIFEFAKEADIVAPCLLLNSETAGI 829
            +WAS SL    PN +           LVD+KGG E I++FA  ADIV  CL LNSETA I
Sbjct: 182  SWASQSL----PNDNA--------DELVDEKGGHEAIYDFASSADIVVCCLRLNSETAAI 229

Query: 830  VNEKFLSSMKKGALLVNVARGGILDYKAVAXXXXXXXXXXXXIDVAWTEPFNPDDKILKF 1009
            +++KF+SSM+KG LL+N+ARGG++DY+AVA             DV WTEPFNPDD+ILKF
Sbjct: 230  IDKKFISSMRKGGLLINIARGGLMDYEAVAYHLESGHLGGLGTDVTWTEPFNPDDQILKF 289

Query: 1010 QNVLITPHVAGVTEYAYRTMAKVVGDTALQLHAGTALTEVEFVN 1141
            QNV++TPHVAGVTE++YR+MAKVVGD ALQLHAG  LT +EFVN
Sbjct: 290  QNVIVTPHVAGVTEHSYRSMAKVVGDIALQLHAGAPLTGLEFVN 333


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