BLASTX nr result

ID: Coptis23_contig00012992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012992
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17902.3| unnamed protein product [Vitis vinifera]              197   3e-48
ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263...   177   4e-42
ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|2...   174   4e-41
ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-38
ref|XP_003545166.1| PREDICTED: uncharacterized protein LOC100775...   158   3e-36

>emb|CBI17902.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  197 bits (502), Expect = 3e-48
 Identities = 127/343 (37%), Positives = 186/343 (54%), Gaps = 1/343 (0%)
 Frame = +3

Query: 108  SVLVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAFYLNTNESSQLGSLPMKR 287
            SV  L+W+KSYYWEPQK AI  QRD    +RK++KSK+ ELAF L   +SS+ G  P+ +
Sbjct: 83   SVKALDWLKSYYWEPQKKAIPLQRDGSSNIRKEIKSKIRELAFCLKVRQSSRSGG-PLAK 141

Query: 288  KRSKQSSVILARFNLFSHTVKKLHGSQSQGPKKHITRILGKLFQLYTSSPSEXXXXXXXX 467
             + K   ++      FS    KL  S S  PKK ITRIL  L  LY+S  SE        
Sbjct: 142  GKRKHGELLCGSNKFFSVMTGKLLSSNSGVPKKQITRILKNLVLLYSSYSSEVVSVLLDL 201

Query: 468  XXKAFDSSNVVEPLHDSGVEQISGDSRTQTGLTNLFKLVITRLSSREPDLILIMLQAVFQ 647
              K  DS ++ E L +S + Q + + +T   + + +KL++T+ S++EP+L L +L+AV  
Sbjct: 202  LLKTSDSLHLAELLKNSQIGQRTDNMQT---VFDDWKLLLTKFSNKEPELPLTLLKAVLD 258

Query: 648  TLERRDTMKYEIDKESLSCSQSKAEDLQIEQLSSLVLWLIEDYKRVKQHASPIVRGNEIH 827
             +E ++ MK EI    L  S+   E  QIE LSSL  WL+E +K                
Sbjct: 259  MIETQEAMKIEIGGHHLISSEDDVEIGQIELLSSLFAWLVEHFKGFYSEIQ--------- 309

Query: 828  NSSVDMNVVPKVTLAEILKKCLLYS-PGNRQLARSAMLLAQIIGSSSMVERXXXXXXXXX 1004
                    +PK TL E+L+KCLL S P N+ +  SA+LLAQ+  ++ M+E+         
Sbjct: 310  --------IPKATLLELLRKCLLVSAPDNKLIMGSALLLAQMAENNIMIEKLSRFCLLGL 361

Query: 1005 XNLDSAEQSSVHVDTAHIINQQDSSIRQAAEMLEFLKQRRNKG 1133
               D  E+++  +    ++  Q+ +IRQAAE LE +K+ R KG
Sbjct: 362  SKSDVTEETAPPLSFEKLLVHQEDAIRQAAEKLELVKRHRVKG 404


>ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263330 [Vitis vinifera]
          Length = 597

 Score =  177 bits (449), Expect = 4e-42
 Identities = 121/343 (35%), Positives = 175/343 (51%), Gaps = 1/343 (0%)
 Frame = +3

Query: 108  SVLVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAFYLNTNESSQLGSLPMKR 287
            SV  L+W+KSYYWEPQK AI  QRD    +RK++KSK+ ELAF L   +SS+ G    K 
Sbjct: 160  SVKALDWLKSYYWEPQKKAIPLQRDGSSNIRKEIKSKIRELAFCLKVRQSSRSGGPLAKG 219

Query: 288  KRSKQSSVILARFNLFSHTVKKLHGSQSQGPKKHITRILGKLFQLYTSSPSEXXXXXXXX 467
            K                             PKK ITRIL  L  LY+S  SE        
Sbjct: 220  KL----------------------------PKKQITRILKNLVLLYSSYSSEVVSVLLDL 251

Query: 468  XXKAFDSSNVVEPLHDSGVEQISGDSRTQTGLTNLFKLVITRLSSREPDLILIMLQAVFQ 647
              K  DS ++ E L +S + Q + + +T   + + +KL++T+ S++EP+L L +L+AV  
Sbjct: 252  LLKTSDSLHLAELLKNSQIGQRTDNMQT---VFDDWKLLLTKFSNKEPELPLTLLKAVLD 308

Query: 648  TLERRDTMKYEIDKESLSCSQSKAEDLQIEQLSSLVLWLIEDYKRVKQHASPIVRGNEIH 827
             +E ++ MK EI    L  S+   E  QIE LSSL  WL+E +K                
Sbjct: 309  MIETQEAMKIEIGGHHLISSEDDVEIGQIELLSSLFAWLVEHFKGFYSEIQ--------- 359

Query: 828  NSSVDMNVVPKVTLAEILKKCLLYS-PGNRQLARSAMLLAQIIGSSSMVERXXXXXXXXX 1004
                    +PK TL E+L+KCLL S P N+ +  SA+LLAQ+  ++ M+E+         
Sbjct: 360  --------IPKATLLELLRKCLLVSAPDNKLIMGSALLLAQMAENNIMIEKLSRFCLLGL 411

Query: 1005 XNLDSAEQSSVHVDTAHIINQQDSSIRQAAEMLEFLKQRRNKG 1133
               D  E+++  +    ++  Q+ +IRQAAE LE +K+ R KG
Sbjct: 412  SKSDVTEETAPPLSFEKLLVHQEDAIRQAAEKLELVKRHRVKG 454


>ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|222850418|gb|EEE87965.1|
            predicted protein [Populus trichocarpa]
          Length = 617

 Score =  174 bits (441), Expect = 4e-41
 Identities = 125/357 (35%), Positives = 184/357 (51%), Gaps = 9/357 (2%)
 Frame = +3

Query: 93   LIGHHSVLVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAFYLNTNESSQLGS 272
            L+   +V  ++W+KSYYWEPQ   I  QRD    +RK++KSK  ELA  L   +S+Q GS
Sbjct: 163  LVRDSAVKAIDWLKSYYWEPQTKQIPFQRDGSADIRKEIKSKFCELASCLKVKKSTQPGS 222

Query: 273  LPMKRKRSKQSSVILARFNLFSHTVKKLHGSQSQGPKKHITRILGKLFQLYTSSPSEXXX 452
              +K KRS                            KK+IT+ L  L +LY+S  SE   
Sbjct: 223  SAIKAKRS----------------------------KKNITKTLKNLVRLYSSFSSEVLS 254

Query: 453  XXXXXXXKAFDSSNVVEPLHDSGVEQISGDSRTQTGLTNL---FKLVITRLSSREPDLIL 623
                   KA DSSN+VE         +  D     G+  L   +KLVIT+ S +EP+++L
Sbjct: 255  VLLEFLLKALDSSNLVE---------LPKDCLVGEGVCTLLDDWKLVITKFSKKEPEVLL 305

Query: 624  IMLQAVFQTLERRDTMKYEIDKESLSCSQSKAEDLQIEQLSSLVLWLIEDYK-----RVK 788
            ++L+AV   ++  + MKYE+    +S  Q   E+ QI++LSSL  WL+   K     R K
Sbjct: 306  MLLKAVLNMIDTHEAMKYEMGTHLISWEQG-TENRQIDRLSSLFAWLVGQLKGLKPLRCK 364

Query: 789  QHASPIVRGNEIHNSSVDMNVVPKVTLAEILKKCLL-YSPGNRQLARSAMLLAQIIGSSS 965
            Q A+      E   SS+ MN +    L E+L+KCLL +S GN+QL  SA+ LAQ++G SS
Sbjct: 365  QSAA------ESLASSIGMN-LSNAILMEVLRKCLLVFSYGNKQLMGSALHLAQLMGDSS 417

Query: 966  MVERXXXXXXXXXXNLDSAEQSSVHVDTAHIINQQDSSIRQAAEMLEFLKQRRNKGK 1136
            ++++          + +  ++ S  +     + QQD SI QA + L+F+K  R K K
Sbjct: 418  VMDKLKKLSLLALSDPEVTQEKSPPLSLNSFLTQQDQSIHQATKKLDFVKLCRTKSK 474


>ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|222845717|gb|EEE83264.1|
            predicted protein [Populus trichocarpa]
          Length = 626

 Score =  164 bits (414), Expect = 5e-38
 Identities = 121/355 (34%), Positives = 179/355 (50%), Gaps = 6/355 (1%)
 Frame = +3

Query: 93   LIGHHSVLVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAFYLNTNESSQLGS 272
            L+   +V  ++W+KSYYWEPQ   I  Q D    +RK+++SKL EL   L   +S + GS
Sbjct: 165  LVQDSAVKAIDWLKSYYWEPQTKQIPFQSDGTASIRKEIESKLLELVSCLKVKKSPEPGS 224

Query: 273  LPMKRKRSKQSSVILARFNLFSHTVKKLHGSQSQGPKKHITRILGKLFQLYTSSPSEXXX 452
              +K KRS                            KK+IT+ L  L +LY+S  SE   
Sbjct: 225  SAIKEKRS----------------------------KKNITKTLKNLVRLYSSFSSEVLS 256

Query: 453  XXXXXXXKAFDSSNVVEPLHDSGVEQISGDSRTQTGLTNLFKLVITRLSSREPDLILIML 632
                   +A DSSN+VE      V              + +KLVIT+ S +EP+L+L++L
Sbjct: 257  VLFEFLLQALDSSNLVELTKGCLV------GEDMNSFLDDWKLVITKFSKKEPELLLMLL 310

Query: 633  QAVFQTLERRDTMKYEIDKESLSCSQSKAEDLQIEQLSSLVLWLIEDYK-----RVKQHA 797
            +AV   ++ ++ MKYE+    L+    + E  QIE+LSSL  WL+   K     R K+ A
Sbjct: 311  KAVLNMIDAQEAMKYEMGTH-LTSRAYRTETGQIERLSSLFAWLVGQLKGLKPLRCKETA 369

Query: 798  SPIVRGNEIHNSSVDMNVVPKVTLAEILKKCLLYSP-GNRQLARSAMLLAQIIGSSSMVE 974
            +      E   SS+ MN +    L E+L+KCLL S  GN+QL  SA+ LAQ++G +S++ 
Sbjct: 370  A------ERKASSIGMN-LSNTILMEVLRKCLLVSSNGNKQLMDSALHLAQLMGDTSVMG 422

Query: 975  RXXXXXXXXXXNLDSAEQSSVHVDTAHIINQQDSSIRQAAEMLEFLKQRRNKGKA 1139
            +          + D  ++ S      +++ QQD SI QA + LEF+K  R K KA
Sbjct: 423  KLKKLSSLVLSDPDVTQEKSSLPSLNNLLIQQDESIHQATKKLEFVKFCRTKSKA 477


>ref|XP_003545166.1| PREDICTED: uncharacterized protein LOC100775513 [Glycine max]
          Length = 631

 Score =  158 bits (399), Expect = 3e-36
 Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 1/344 (0%)
 Frame = +3

Query: 108  SVLVLEWVKSYYWEPQKNAILSQRDTIDFVRKKVKSKLHELAFYLNTNESSQLGSLPMKR 287
            SV  L W+KSYYWEPQ  AI    + I  V K++KS++ ELA  L  N S+Q  S  +K 
Sbjct: 164  SVKALGWLKSYYWEPQSKAIPFHGEGIAKVNKEIKSRIRELAICLKVNGSAQSSSSLLKA 223

Query: 288  KRSKQSSVILARFNLFSHTVKKLHGSQSQGPKKHITRILGKLFQLYTSSPSEXXXXXXXX 467
            KR K   ++  R  L S  V K   S+++G KK IT+IL  + +LY+S   E        
Sbjct: 224  KRVKHGELLFGRNKLLSLIVGKSQTSRTRGSKKQITKILKYVLRLYSSFSKEIVSVLLEY 283

Query: 468  XXKAFDSSNVVEPLHDSGVEQISGDSRTQTGLTNLFKLVITRLSSREPDLILIMLQAVFQ 647
              KA  SS + E   D+ +        TQ  L + + LVI +L ++ P+L+L +L+ V  
Sbjct: 284  LLKALSSSELEENADDASI-----GLTTQNVLAD-WMLVILKLCNK-PELLLNLLKEVLD 336

Query: 648  TLERRDTMKYEIDKESLSCSQSKAEDLQIEQLSSLVLWLIEDYKRVKQHASPIVRGNEIH 827
             +E ++ MKY+ D  ++  S S+ E     +LSSL  WL+    +V   A+         
Sbjct: 337  MIESQEDMKYKEDNPNMGVSHSRTE----FRLSSLFAWLVGILSKVPSAAAN-------- 384

Query: 828  NSSVDMNVVPKVTLAEILKKCLLYSP-GNRQLARSAMLLAQIIGSSSMVERXXXXXXXXX 1004
                    +PK  L E+L++CLL S   N+QL  SA+ LA+++  S ++E+         
Sbjct: 385  --------MPKRVLHELLRRCLLVSQLCNKQLVDSALQLAELMNDSYLMEKVRKFSLISL 436

Query: 1005 XNLDSAEQSSVHVDTAHIINQQDSSIRQAAEMLEFLKQRRNKGK 1136
             NL+SA+  S  + + +I  Q + S+ +AA+ LE +KQ+  K K
Sbjct: 437  SNLESADDESPLLTSKNIF-QFEESMLEAAKKLELVKQQIMKNK 479


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