BLASTX nr result
ID: Coptis23_contig00012973
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012973 (271 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAK18858.1| MYB transcription factor precursor [Phillyrea la... 145 3e-33 ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|2... 134 8e-30 dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica] 132 3e-29 ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo... 132 4e-29 emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife... 132 4e-29 >emb|CAK18858.1| MYB transcription factor precursor [Phillyrea latifolia] Length = 159 Score = 145 bits (366), Expect = 3e-33 Identities = 66/86 (76%), Positives = 77/86 (89%) Frame = +3 Query: 12 GGGFMLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRG 191 G GFMLFGVRV E SFRKS S++NL+QYEQ HESN+D+AAGYASDD+VH S + +RKRG Sbjct: 13 GKGFMLFGVRVMEGSFRKSASLSNLAQYEQPHESNNDVAAGYASDDIVHPSGRSHDRKRG 72 Query: 192 VPWTEEEHRMFLIGLQRVGKGDWRGI 269 VPWTEEEHR+FLIGLQ+VG+GDWRGI Sbjct: 73 VPWTEEEHRLFLIGLQKVGRGDWRGI 98 >ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|222864740|gb|EEF01871.1| predicted protein [Populus trichocarpa] Length = 307 Score = 134 bits (337), Expect = 8e-30 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 3/87 (3%) Frame = +3 Query: 18 GFMLFGVRVAEN--SFRKSVSMNNLSQYEQLHES-NSDIAAGYASDDVVHTSDGNRERKR 188 G MLFGVRVAE SFRKS SM NLSQYEQ HE N+D+AAGY SDDVVH S +RERKR Sbjct: 34 GIMLFGVRVAEGAASFRKSASMINLSQYEQPHEEPNADVAAGYESDDVVHASGRSRERKR 93 Query: 189 GVPWTEEEHRMFLIGLQRVGKGDWRGI 269 GVPWTEEEH++FL+GLQ+VGKGDWRGI Sbjct: 94 GVPWTEEEHKLFLLGLQKVGKGDWRGI 120 >dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica] Length = 255 Score = 132 bits (332), Expect = 3e-29 Identities = 62/82 (75%), Positives = 70/82 (85%) Frame = +3 Query: 24 MLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRGVPWT 203 MLFGVRV E S RKSVS+N+LS YEQ E N D+ +GYASDDVVH S NRERKRGVPWT Sbjct: 1 MLFGVRVTEGSIRKSVSLNDLSLYEQPQEPNPDLTSGYASDDVVHNSIRNRERKRGVPWT 60 Query: 204 EEEHRMFLIGLQRVGKGDWRGI 269 EEEHR+FL+GL++VGKGDWRGI Sbjct: 61 EEEHRLFLLGLKKVGKGDWRGI 82 >ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera] Length = 288 Score = 132 bits (331), Expect = 4e-29 Identities = 63/82 (76%), Positives = 71/82 (86%) Frame = +3 Query: 24 MLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRGVPWT 203 MLFGVR+ E +FRKS SM NLSQYEQ +SN+D AGYASDDVVH S +RERKRGVPWT Sbjct: 32 MLFGVRITEGAFRKSASMTNLSQYEQPQDSNAD--AGYASDDVVHASARSRERKRGVPWT 89 Query: 204 EEEHRMFLIGLQRVGKGDWRGI 269 EEEHR+FL+GLQ+VGKGDWRGI Sbjct: 90 EEEHRLFLLGLQKVGKGDWRGI 111 >emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera] gi|296086475|emb|CBI32064.3| unnamed protein product [Vitis vinifera] Length = 300 Score = 132 bits (331), Expect = 4e-29 Identities = 63/82 (76%), Positives = 71/82 (86%) Frame = +3 Query: 24 MLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRGVPWT 203 MLFGVR+ E +FRKS SM NLSQYEQ +SN+D AGYASDDVVH S +RERKRGVPWT Sbjct: 32 MLFGVRITEGAFRKSASMTNLSQYEQPQDSNAD--AGYASDDVVHASARSRERKRGVPWT 89 Query: 204 EEEHRMFLIGLQRVGKGDWRGI 269 EEEHR+FL+GLQ+VGKGDWRGI Sbjct: 90 EEEHRLFLLGLQKVGKGDWRGI 111