BLASTX nr result

ID: Coptis23_contig00012973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012973
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAK18858.1| MYB transcription factor precursor [Phillyrea la...   145   3e-33
ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica]        132   3e-29
ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo...   132   4e-29
emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife...   132   4e-29

>emb|CAK18858.1| MYB transcription factor precursor [Phillyrea latifolia]
          Length = 159

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/86 (76%), Positives = 77/86 (89%)
 Frame = +3

Query: 12  GGGFMLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRG 191
           G GFMLFGVRV E SFRKS S++NL+QYEQ HESN+D+AAGYASDD+VH S  + +RKRG
Sbjct: 13  GKGFMLFGVRVMEGSFRKSASLSNLAQYEQPHESNNDVAAGYASDDIVHPSGRSHDRKRG 72

Query: 192 VPWTEEEHRMFLIGLQRVGKGDWRGI 269
           VPWTEEEHR+FLIGLQ+VG+GDWRGI
Sbjct: 73  VPWTEEEHRLFLIGLQKVGRGDWRGI 98


>ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|222864740|gb|EEF01871.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/87 (77%), Positives = 74/87 (85%), Gaps = 3/87 (3%)
 Frame = +3

Query: 18  GFMLFGVRVAEN--SFRKSVSMNNLSQYEQLHES-NSDIAAGYASDDVVHTSDGNRERKR 188
           G MLFGVRVAE   SFRKS SM NLSQYEQ HE  N+D+AAGY SDDVVH S  +RERKR
Sbjct: 34  GIMLFGVRVAEGAASFRKSASMINLSQYEQPHEEPNADVAAGYESDDVVHASGRSRERKR 93

Query: 189 GVPWTEEEHRMFLIGLQRVGKGDWRGI 269
           GVPWTEEEH++FL+GLQ+VGKGDWRGI
Sbjct: 94  GVPWTEEEHKLFLLGLQKVGKGDWRGI 120


>dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica]
          Length = 255

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = +3

Query: 24  MLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRGVPWT 203
           MLFGVRV E S RKSVS+N+LS YEQ  E N D+ +GYASDDVVH S  NRERKRGVPWT
Sbjct: 1   MLFGVRVTEGSIRKSVSLNDLSLYEQPQEPNPDLTSGYASDDVVHNSIRNRERKRGVPWT 60

Query: 204 EEEHRMFLIGLQRVGKGDWRGI 269
           EEEHR+FL+GL++VGKGDWRGI
Sbjct: 61  EEEHRLFLLGLKKVGKGDWRGI 82


>ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera]
          Length = 288

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = +3

Query: 24  MLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRGVPWT 203
           MLFGVR+ E +FRKS SM NLSQYEQ  +SN+D  AGYASDDVVH S  +RERKRGVPWT
Sbjct: 32  MLFGVRITEGAFRKSASMTNLSQYEQPQDSNAD--AGYASDDVVHASARSRERKRGVPWT 89

Query: 204 EEEHRMFLIGLQRVGKGDWRGI 269
           EEEHR+FL+GLQ+VGKGDWRGI
Sbjct: 90  EEEHRLFLLGLQKVGKGDWRGI 111


>emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera]
           gi|296086475|emb|CBI32064.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = +3

Query: 24  MLFGVRVAENSFRKSVSMNNLSQYEQLHESNSDIAAGYASDDVVHTSDGNRERKRGVPWT 203
           MLFGVR+ E +FRKS SM NLSQYEQ  +SN+D  AGYASDDVVH S  +RERKRGVPWT
Sbjct: 32  MLFGVRITEGAFRKSASMTNLSQYEQPQDSNAD--AGYASDDVVHASARSRERKRGVPWT 89

Query: 204 EEEHRMFLIGLQRVGKGDWRGI 269
           EEEHR+FL+GLQ+VGKGDWRGI
Sbjct: 90  EEEHRLFLLGLQKVGKGDWRGI 111


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