BLASTX nr result
ID: Coptis23_contig00012961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012961
(1759 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003525096.1| PREDICTED: ribonucleoside-diphosphate reduct... 919 0.0
ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reduct... 915 0.0
ref|XP_002534320.1| ribonucleoside-diphosphate reductase large c... 915 0.0
ref|NP_001056926.1| Os06g0168600 [Oryza sativa Japonica Group] g... 913 0.0
gb|EEC84098.1| hypothetical protein OsI_30411 [Oryza sativa Indi... 913 0.0
>ref|XP_003525096.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Glycine max] gi|27261142|gb|AAN87547.1|AF118784_1
ribonucleotide reductase large subunit A [Glycine max]
Length = 809
Score = 919 bits (2375), Expect = 0.0
Identities = 457/552 (82%), Positives = 480/552 (86%)
Frame = -2
Query: 1656 MYVVKRDGRHETVHFDKITARLKKLSYGLSIEHCDPVLVAQKVCAGVYKGVTTSQLDELX 1477
MYVVKRDGR ETVHFDKITARLKKLSYGLS EHCDPVLV+QKVCAGVYKGVTTSQLDEL
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 1476 XXXXXXXXANHPDYASLAARIVVSNLHKNTKKSFSETIKDMYCHFNKRSGQKAPLVADDV 1297
ANHPDYASLAARI VSNLHKNTKKSFSETIK MY HFN+RS KAPL+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETIKVMYYHFNERSAMKAPLIADDV 120
Query: 1296 YEIIMKNSELLDSEIIXXXXXXXXXXXFKTLERSYLLKMEGKVVERPQHMLMRVSVGIHK 1117
YEII+KN+ LDSEII FKTLERSYLLK++GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 1116 DDIESVLKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 937
DDI+S ++TYH+MSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV
Sbjct: 181 DDIDSAVRTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 936 ISKSAGGIGVSVHNIRATSSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFSVY 757
ISKSAGGIGVSVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF+VY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 756 LEPWHADVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMQRVQGNGQWSLFCPNEAPGLA 577
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+ DLFM+RVQ NGQWSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVSDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 576 DCWGEEFENLYKQYERAGKAKKVVSAQNLWFEILKAQIETGTXXXXXXXXXXXXXXXXXX 397
DCWGEEFE LY QYER GKAKKVV AQNLWFEILK+QIETGT
Sbjct: 361 DCWGEEFEKLYTQYEREGKAKKVVQAQNLWFEILKSQIETGT------------------ 402
Query: 396 XXXXXXXXXXPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 217
PYMLFKD CN+KSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP
Sbjct: 403 ----------PYMLFKDTCNKKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
Query: 216 RYVREKDVPIESHPSKLVGSSGSKNRYFDFDKLAEVTALVTTNLNKIIDVNYYPVDTAKT 37
RYVREK VP+ESHPSKLVGS GSKNRYFDFDKL EVTA+V TNLNKIIDVNYYPVDTA+
Sbjct: 453 RYVREKGVPMESHPSKLVGSRGSKNRYFDFDKLGEVTAIVATNLNKIIDVNYYPVDTARR 512
Query: 36 SNLRHRPIGLGV 1
SN+RHRPIG+GV
Sbjct: 513 SNMRHRPIGIGV 524
>ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Vitis
vinifera] gi|296082544|emb|CBI21549.3| unnamed protein
product [Vitis vinifera]
Length = 808
Score = 915 bits (2366), Expect = 0.0
Identities = 456/552 (82%), Positives = 484/552 (87%)
Frame = -2
Query: 1656 MYVVKRDGRHETVHFDKITARLKKLSYGLSIEHCDPVLVAQKVCAGVYKGVTTSQLDELX 1477
MYVVKRDGR E+VHFDKITARLKKLSYGLSI+HCDPVLV+QKVCAGVYKGVTTSQLDEL
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 1476 XXXXXXXXANHPDYASLAARIVVSNLHKNTKKSFSETIKDMYCHFNKRSGQKAPLVADDV 1297
ANHPDYASLAARIVVSNLHKNTKKSFSETIK+MY HFN+RSG KAPL+A DV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 1296 YEIIMKNSELLDSEIIXXXXXXXXXXXFKTLERSYLLKMEGKVVERPQHMLMRVSVGIHK 1117
YEIIMKN+ LDSEII FKTLERSYLLK++GKVVERPQHMLMRVSVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 1116 DDIESVLKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 937
DDI+S +KTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIYDTLKECAV
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 936 ISKSAGGIGVSVHNIRATSSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFSVY 757
ISKSAGGIGVSVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF+VY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 756 LEPWHADVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMQRVQGNGQWSLFCPNEAPGLA 577
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPNEAPGLA 360
Query: 576 DCWGEEFENLYKQYERAGKAKKVVSAQNLWFEILKAQIETGTXXXXXXXXXXXXXXXXXX 397
DCWG+EF +LY QYER GKAKKVV AQNLWFE+LK+QIETGT
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGT------------------ 402
Query: 396 XXXXXXXXXXPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 217
PYMLFKD+CN+KSNQQNLGTIKSSNLCTEIIEYTS ETAVCNLASIALP
Sbjct: 403 ----------PYMLFKDSCNKKSNQQNLGTIKSSNLCTEIIEYTSADETAVCNLASIALP 452
Query: 216 RYVREKDVPIESHPSKLVGSSGSKNRYFDFDKLAEVTALVTTNLNKIIDVNYYPVDTAKT 37
RYVREK VP+ES+PSKLVGS GSKNR+FDFDKLAEVTA+VT+NLNKIIDVNYYPV+TAK
Sbjct: 453 RYVREKGVPMESNPSKLVGSRGSKNRFFDFDKLAEVTAIVTSNLNKIIDVNYYPVETAKR 512
Query: 36 SNLRHRPIGLGV 1
SNLRHRPIGLGV
Sbjct: 513 SNLRHRPIGLGV 524
>ref|XP_002534320.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis] gi|223525502|gb|EEF28063.1|
ribonucleoside-diphosphate reductase large chain,
putative [Ricinus communis]
Length = 776
Score = 915 bits (2366), Expect = 0.0
Identities = 456/552 (82%), Positives = 481/552 (87%)
Frame = -2
Query: 1656 MYVVKRDGRHETVHFDKITARLKKLSYGLSIEHCDPVLVAQKVCAGVYKGVTTSQLDELX 1477
MYVVKRDGR ETVHFDKITARLKKLSYGLS++HCDPVLV+QKVCAGVYKGVTTSQLDEL
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSMDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 1476 XXXXXXXXANHPDYASLAARIVVSNLHKNTKKSFSETIKDMYCHFNKRSGQKAPLVADDV 1297
ANHPDYASLAARIVVSNLHKNTKKSFSETIK MY HFN+RSG KAPL+ADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKVMYNHFNERSGLKAPLIADDV 120
Query: 1296 YEIIMKNSELLDSEIIXXXXXXXXXXXFKTLERSYLLKMEGKVVERPQHMLMRVSVGIHK 1117
Y IIMKN+ LDSEII FKTLERSYLLK++GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YNIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 1116 DDIESVLKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 937
DDI+SV+KTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV
Sbjct: 181 DDIDSVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 936 ISKSAGGIGVSVHNIRATSSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFSVY 757
ISKSAGGIGVS+HNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF+VY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 756 LEPWHADVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMQRVQGNGQWSLFCPNEAPGLA 577
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NGQWS+FCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSVFCPNEAPGLA 360
Query: 576 DCWGEEFENLYKQYERAGKAKKVVSAQNLWFEILKAQIETGTXXXXXXXXXXXXXXXXXX 397
DCWGEEFE LY QYER GKAKKVV AQNLWFEILK+QIETGT
Sbjct: 361 DCWGEEFERLYTQYEREGKAKKVVQAQNLWFEILKSQIETGT------------------ 402
Query: 396 XXXXXXXXXXPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 217
PYM+FKD NRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP
Sbjct: 403 ----------PYMVFKDTSNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
Query: 216 RYVREKDVPIESHPSKLVGSSGSKNRYFDFDKLAEVTALVTTNLNKIIDVNYYPVDTAKT 37
R+VREK VP+ESHPSK+VGS GSKNRYFDFDKLAEVT +VT NLNKIIDVNYYPV+ AK
Sbjct: 453 RFVREKGVPMESHPSKVVGSRGSKNRYFDFDKLAEVTEVVTCNLNKIIDVNYYPVENAKR 512
Query: 36 SNLRHRPIGLGV 1
SN RHRPIG+GV
Sbjct: 513 SNFRHRPIGIGV 524
>ref|NP_001056926.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|55296056|dbj|BAD67618.1| putative ribonucleotide
reductase [Oryza sativa Japonica Group]
gi|55296229|dbj|BAD67970.1| putative ribonucleotide
reductase [Oryza sativa Japonica Group]
gi|113594966|dbj|BAF18840.1| Os06g0168600 [Oryza sativa
Japonica Group] gi|222635036|gb|EEE65168.1| hypothetical
protein OsJ_20270 [Oryza sativa Japonica Group]
Length = 814
Score = 913 bits (2360), Expect = 0.0
Identities = 456/552 (82%), Positives = 478/552 (86%)
Frame = -2
Query: 1656 MYVVKRDGRHETVHFDKITARLKKLSYGLSIEHCDPVLVAQKVCAGVYKGVTTSQLDELX 1477
MYVVKRDGR ETVHFDKITARLKKLSYGLS EHCDPVLVAQKVCAGVYKGVTTSQLDEL
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 1476 XXXXXXXXANHPDYASLAARIVVSNLHKNTKKSFSETIKDMYCHFNKRSGQKAPLVADDV 1297
A+HPDYASLAARI VSNLHKNTKKSFSETIKDMY HFN+RSG APLVA DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 1296 YEIIMKNSELLDSEIIXXXXXXXXXXXFKTLERSYLLKMEGKVVERPQHMLMRVSVGIHK 1117
YE+IMKN+ LDSEII FKTLERSYLLK+ GKVVERPQHMLMRVSVGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 1116 DDIESVLKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 937
DDIES +KTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIYDTLKECAV
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 936 ISKSAGGIGVSVHNIRATSSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFSVY 757
ISKSAGGIGVSVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF+VY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 756 LEPWHADVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMQRVQGNGQWSLFCPNEAPGLA 577
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFMQRVQ N +WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 576 DCWGEEFENLYKQYERAGKAKKVVSAQNLWFEILKAQIETGTXXXXXXXXXXXXXXXXXX 397
DCWG+EFE LY +YER GKAKK+V AQ LWF+ILKAQIETGT
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGT------------------ 402
Query: 396 XXXXXXXXXXPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 217
PYML+KD CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP
Sbjct: 403 ----------PYMLYKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
Query: 216 RYVREKDVPIESHPSKLVGSSGSKNRYFDFDKLAEVTALVTTNLNKIIDVNYYPVDTAKT 37
R+VREK VPIESHPSKLVGSS SKNRYFDFDKLAEVT+ VT NLNKIID+NYYPV+TAK
Sbjct: 453 RFVREKGVPIESHPSKLVGSSDSKNRYFDFDKLAEVTSTVTYNLNKIIDINYYPVETAKR 512
Query: 36 SNLRHRPIGLGV 1
SN+RHRPIG+GV
Sbjct: 513 SNMRHRPIGIGV 524
>gb|EEC84098.1| hypothetical protein OsI_30411 [Oryza sativa Indica Group]
Length = 814
Score = 913 bits (2360), Expect = 0.0
Identities = 456/552 (82%), Positives = 478/552 (86%)
Frame = -2
Query: 1656 MYVVKRDGRHETVHFDKITARLKKLSYGLSIEHCDPVLVAQKVCAGVYKGVTTSQLDELX 1477
MYVVKRDGR ETVHFDKITARLKKLSYGLS EHCDPVLVAQKVCAGVYKGVTTSQLDEL
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 1476 XXXXXXXXANHPDYASLAARIVVSNLHKNTKKSFSETIKDMYCHFNKRSGQKAPLVADDV 1297
A+HPDYASLAARI VSNLHKNTKKSFSETIKDMY HFN+RSG APLVA DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 1296 YEIIMKNSELLDSEIIXXXXXXXXXXXFKTLERSYLLKMEGKVVERPQHMLMRVSVGIHK 1117
YE+IMKN+ LDSEII FKTLERSYLLK+ GKVVERPQHMLMRVSVGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 1116 DDIESVLKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 937
DDIES +KTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFL+CMKDDSIEGIYDTLKECAV
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 936 ISKSAGGIGVSVHNIRATSSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFSVY 757
ISKSAGGIGVSVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF+VY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 756 LEPWHADVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMQRVQGNGQWSLFCPNEAPGLA 577
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFMQRVQ N +WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 576 DCWGEEFENLYKQYERAGKAKKVVSAQNLWFEILKAQIETGTXXXXXXXXXXXXXXXXXX 397
DCWG+EFE LY +YER GKAKK+V AQ LWF+ILKAQIETGT
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGT------------------ 402
Query: 396 XXXXXXXXXXPYMLFKDACNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 217
PYML+KD CNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP
Sbjct: 403 ----------PYMLYKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIALP 452
Query: 216 RYVREKDVPIESHPSKLVGSSGSKNRYFDFDKLAEVTALVTTNLNKIIDVNYYPVDTAKT 37
R+VREK VPIESHPSKLVGSS SKNRYFDFDKLAEVT+ VT NLNKIID+NYYPV+TAK
Sbjct: 453 RFVREKGVPIESHPSKLVGSSDSKNRYFDFDKLAEVTSTVTYNLNKIIDINYYPVETAKR 512
Query: 36 SNLRHRPIGLGV 1
SN+RHRPIG+GV
Sbjct: 513 SNMRHRPIGIGV 524