BLASTX nr result

ID: Coptis23_contig00012942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012942
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]    79   5e-13
ref|XP_003539578.1| PREDICTED: probable disease resistance prote...    77   1e-12
ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...    77   1e-12
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    77   1e-12
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...    77   1e-12

>emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]
          Length = 1052

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/88 (46%), Positives = 56/88 (63%)
 Frame = +3

Query: 48  IAHCFFVHMQGLRVLDIRETDVQFLPDSVSDLVKLRALLLRGCSKLKGLPSLSKVQSXXX 227
           + + FFVHM GLRVLD+  T++ FLPDS+ D VKLRAL+L  C KLK + SL+K++    
Sbjct: 468 LPNSFFVHMPGLRVLDLSYTNIAFLPDSIYDKVKLRALILCNCLKLKQVGSLAKLKELRE 527

Query: 228 XXXXXXXXXXXPPGMEMLVNLKRLNLSM 311
                      P G+E LV+LK+ N S+
Sbjct: 528 LNLGDNQMETIPDGIEKLVHLKQFNWSL 555


>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Glycine max]
          Length = 962

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/92 (45%), Positives = 55/92 (59%)
 Frame = +3

Query: 30  SNGLKHIAHCFFVHMQGLRVLDIRETDVQFLPDSVSDLVKLRALLLRGCSKLKGLPSLSK 209
           +  L  I+  FFVHM  L+VLD+  TD++ LP SV+DL  L ALLL  C +LK +PSL+K
Sbjct: 540 NESLTSISDSFFVHMSSLQVLDLSFTDIEVLPKSVADLNTLTALLLTSCKRLKHMPSLAK 599

Query: 210 VQSXXXXXXXXXXXXXXPPGMEMLVNLKRLNL 305
           +Q+              P  +E LVNLK LNL
Sbjct: 600 LQTLIRLDLSFTAITEIPQDLETLVNLKWLNL 631


>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = +3

Query: 39  LKHIAHCFFVHMQGLRVLDIRETDVQFLPDSVSDLVKLRALLLRGCSKLKGLPSLSKVQS 218
           L+ IA  FF H+QGL+VLD+  T ++ LP S SDLV L AL LR C  L+ +PSL+K++ 
Sbjct: 474 LEMIADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNLRYIPSLAKLRG 533

Query: 219 XXXXXXXXXXXXXXPPGMEMLVNLKRLNL---SMMEKLREVIP 338
                         P GMEML NL+ LNL   S+ E    ++P
Sbjct: 534 LRKLDLRYTALEELPQGMEMLSNLRYLNLFGNSLKEMPAGILP 576


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = +3

Query: 39  LKHIAHCFFVHMQGLRVLDIRETDVQFLPDSVSDLVKLRALLLRGCSKLKGLPSLSKVQS 218
           L+ IA  FF H+QGL+VLD+  T ++ LP S SDLV L AL LR C  L+ +PSL+K++ 
Sbjct: 619 LEMIADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCHNLRYIPSLAKLRG 678

Query: 219 XXXXXXXXXXXXXXPPGMEMLVNLKRLNL---SMMEKLREVIP 338
                         P GMEML NL+ LNL   S+ E    ++P
Sbjct: 679 LRKLDLRYTALEELPQGMEMLSNLRYLNLFGNSLKEMPAGILP 721


>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/89 (47%), Positives = 54/89 (60%)
 Frame = +3

Query: 39  LKHIAHCFFVHMQGLRVLDIRETDVQFLPDSVSDLVKLRALLLRGCSKLKGLPSLSKVQS 218
           L+ IA  FF H+QGL+VL++  T +  LP S SDLV L AL LR C KL+ +PSL+K++ 
Sbjct: 500 LEMIADSFFKHLQGLKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKLRHIPSLAKLRE 559

Query: 219 XXXXXXXXXXXXXXPPGMEMLVNLKRLNL 305
                         P GMEML NL+ LNL
Sbjct: 560 LRKLDLRYTALEELPQGMEMLSNLRYLNL 588


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