BLASTX nr result

ID: Coptis23_contig00012941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012941
         (1487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266714.2| PREDICTED: apoptosis-inducing factor homolog...   389   e-105
emb|CAN79702.1| hypothetical protein VITISV_040675 [Vitis vinifera]   388   e-105
ref|XP_002299779.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103
ref|XP_002278901.1| PREDICTED: apoptosis-inducing factor homolog...   378   e-102
ref|NP_190005.1| FAD/NAD(P)-binding oxidoreductase family protei...   378   e-102

>ref|XP_002266714.2| PREDICTED: apoptosis-inducing factor homolog A-like [Vitis vinifera]
            gi|296084446|emb|CBI25005.3| unnamed protein product
            [Vitis vinifera]
          Length = 365

 Score =  389 bits (999), Expect = e-105
 Identities = 192/295 (65%), Positives = 239/295 (81%), Gaps = 1/295 (0%)
 Frame = +2

Query: 134  ASDNKRXXXXXXXXXXXFMAKELQFGAHVTLIDPKDFFEIPWANLRAMVEPSFAERSVFN 313
            ASD KR            +AK LQF A + L+DPK++FEIPWA+LRAMVEPSFAER+V N
Sbjct: 10   ASDIKRVVILGGGIAGSLLAKSLQFRADIFLVDPKEYFEIPWASLRAMVEPSFAERTVIN 69

Query: 314  HTEYFPNGRLVISHVVSINKSEVVTADGECIPYDYLAVATGHEEPYPKTRAERLKQYEAE 493
            H++Y  NG+LV+S  V+I  +EV+T+ G+ I YDYL +ATGH +  PKTR ERL+QY+AE
Sbjct: 70   HSDYLTNGKLVVSTAVNIRDNEVLTSSGQWIAYDYLVIATGHLDHVPKTRTERLEQYQAE 129

Query: 494  HEKIKASSSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFVNAKASTKALDWL 673
             EKIK+++SILIVGGGPTGVELAGEI VDFP+KKVTLVH+GSRLLEF+ AKAS KALDWL
Sbjct: 130  SEKIKSANSILIVGGGPTGVELAGEIVVDFPDKKVTLVHRGSRLLEFIGAKASKKALDWL 189

Query: 674  ISKKVEVLLEQTVDLNSVLDGEKTTYQTSKGETIAADCHFLCIGKPVG-SWLRETVLKDS 850
             SKKVEVLL Q+VD+N+  DG   TYQTS GETI ADCHF+C GKP+G SWL++T+LKD+
Sbjct: 190  TSKKVEVLLNQSVDINTASDG---TYQTSGGETIRADCHFVCTGKPIGSSWLKDTILKDN 246

Query: 851  LDSRGRLMVEETLQVKGRKNVFAVGDITDIKEMKQGYLARKHAEAAIKNIKLLMS 1015
            LD  G+L+V++ L+V+G KNVFA+GDIT I E++QGYLA++HA  A KNIK+LMS
Sbjct: 247  LDGHGKLVVDDNLRVRGLKNVFAIGDITAIPEIQQGYLAQRHAVVAAKNIKMLMS 301



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +1

Query: 1153 QLPFMTISGCLPGLIKSRDLFVGKTRKTMGLTP 1251
            QLPF TI GC+PG+IKSRDLFVGKTRK MGL P
Sbjct: 330  QLPFATICGCIPGMIKSRDLFVGKTRKQMGLKP 362


>emb|CAN79702.1| hypothetical protein VITISV_040675 [Vitis vinifera]
          Length = 365

 Score =  388 bits (997), Expect = e-105
 Identities = 192/295 (65%), Positives = 238/295 (80%), Gaps = 1/295 (0%)
 Frame = +2

Query: 134  ASDNKRXXXXXXXXXXXFMAKELQFGAHVTLIDPKDFFEIPWANLRAMVEPSFAERSVFN 313
            ASD KR            +AK LQF A + L+DPK++FEIPWA+LRAMVEPSFAER+V N
Sbjct: 10   ASDIKRVVILGGGIAGSLLAKSLQFRADIFLVDPKEYFEIPWASLRAMVEPSFAERTVIN 69

Query: 314  HTEYFPNGRLVISHVVSINKSEVVTADGECIPYDYLAVATGHEEPYPKTRAERLKQYEAE 493
            H++Y  NG+LV+S   +I  +EV+T+ G+ I YDYL +ATGH +  PKTR ERLKQY+AE
Sbjct: 70   HSDYLTNGQLVVSTAXNIRDNEVLTSSGQWIAYDYLVIATGHLDHVPKTRTERLKQYQAE 129

Query: 494  HEKIKASSSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFVNAKASTKALDWL 673
             EKIK+++SILIVGGGPTGVELAGEI VDFP+KKVTLVH+GSRLLEF+ AKAS KALDWL
Sbjct: 130  SEKIKSANSILIVGGGPTGVELAGEIVVDFPDKKVTLVHRGSRLLEFIGAKASKKALDWL 189

Query: 674  ISKKVEVLLEQTVDLNSVLDGEKTTYQTSKGETIAADCHFLCIGKPVG-SWLRETVLKDS 850
             SKKVEVLL Q+VD+N+  DG   TYQTS GETI ADCHF+C GKP+G SWL++T+LKD+
Sbjct: 190  TSKKVEVLLNQSVDINTASDG---TYQTSGGETIXADCHFVCTGKPIGSSWLKDTILKDN 246

Query: 851  LDSRGRLMVEETLQVKGRKNVFAVGDITDIKEMKQGYLARKHAEAAIKNIKLLMS 1015
            LD  G+L+V++ L+V+G KNVFA+GDIT I E++QGYLA++HA  A KNIK+LMS
Sbjct: 247  LDGHGKLVVDDNLRVRGLKNVFAIGDITAIPEIQQGYLAQRHAVVAAKNIKMLMS 301



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +1

Query: 1153 QLPFMTISGCLPGLIKSRDLFVGKTRKTMGLTP 1251
            QLPF TI GC+PG+IKSRDLFVGKTRK MGL P
Sbjct: 330  QLPFATICGCIPGMIKSRDLFVGKTRKQMGLKP 362


>ref|XP_002299779.1| predicted protein [Populus trichocarpa] gi|222847037|gb|EEE84584.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  382 bits (982), Expect = e-103
 Identities = 191/300 (63%), Positives = 228/300 (76%), Gaps = 2/300 (0%)
 Frame = +2

Query: 122  MGSEASDNKRXXXXXXXXXXXFMAKELQFGAHVTLIDPKDFFEIPWANLRAMVEPSFAER 301
            M    S+ +R            +AK LQF A VT IDPK++FEI WANLR MVEPSF ER
Sbjct: 1    MEEMGSEKRRLVVIGGGIAGSLLAKSLQFHADVTFIDPKEYFEITWANLRTMVEPSFGER 60

Query: 302  SVFNHTEYFPNGRLVISHVVSINKSEVVTADGECIPYDYLAVATGHEEPYPKTRAERLKQ 481
            SV NH +Y+ NGR+V S  + I ++EV+TAD   IPYDYL +ATGH +P PKTR ERLK+
Sbjct: 61   SVINHRDYYTNGRIVTSTAIGITETEVLTADDFSIPYDYLVIATGHRDPVPKTRMERLKE 120

Query: 482  YEAEHEKIKASSSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFVNAKASTKA 661
            Y+AE+EKIK++ S+LIVGGGPTGVELAGEI+VDFPEK VTLVH GSRLLEF+  KAS K 
Sbjct: 121  YQAENEKIKSAQSVLIVGGGPTGVELAGEISVDFPEKHVTLVHSGSRLLEFIGPKASDKT 180

Query: 662  LDWLISKKVEVLLEQTVDLNSVLDGE-KTTYQTSKGETIAADCHFLCIGKPVGS-WLRET 835
            L WL SK+V+V LEQ VDLNSV D      Y T+ GE+I ADCHFLC GKP+GS WL  T
Sbjct: 181  LQWLTSKRVDVKLEQRVDLNSVTDSNGSKIYHTTAGESIRADCHFLCTGKPLGSGWLEGT 240

Query: 836  VLKDSLDSRGRLMVEETLQVKGRKNVFAVGDITDIKEMKQGYLARKHAEAAIKNIKLLMS 1015
            +L  +LDSRGRLMV+E L+VKGRKN+FA+GDITD+ E+KQGYLA+KHA  A  N+KLLMS
Sbjct: 241  ILNSNLDSRGRLMVDEYLRVKGRKNIFAIGDITDVPEIKQGYLAQKHALVAAANLKLLMS 300


>ref|XP_002278901.1| PREDICTED: apoptosis-inducing factor homolog A [Vitis vinifera]
            gi|296084033|emb|CBI24421.3| unnamed protein product
            [Vitis vinifera]
          Length = 368

 Score =  378 bits (970), Expect = e-102
 Identities = 185/291 (63%), Positives = 225/291 (77%), Gaps = 1/291 (0%)
 Frame = +2

Query: 143  NKRXXXXXXXXXXXFMAKELQFGAHVTLIDPKDFFEIPWANLRAMVEPSFAERSVFNHTE 322
            N+R            +AK LQF A VTL+DPK++FEIPWA+LRAMVEPSFAERSV NH +
Sbjct: 10   NRRVVVIGGGVAGSLLAKSLQFHADVTLLDPKEYFEIPWASLRAMVEPSFAERSVINHRD 69

Query: 323  YFPNGRLVISHVVSINKSEVVTADGECIPYDYLAVATGHEEPYPKTRAERLKQYEAEHEK 502
            Y  NGR++ S  +++   EV+TA+G  + YDYL +ATGH    P+TR ERL QYE E+EK
Sbjct: 70   YLTNGRIITSRAINVTDKEVLTAEGRALVYDYLVIATGHLYSVPRTRTERLSQYETENEK 129

Query: 503  IKASSSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGSRLLEFVNAKASTKALDWLISK 682
            I+++ SILI+GGGPTGVEL GEIAVDFPEK+VTLVH GSRL++F+  KAS K LDWL SK
Sbjct: 130  IRSAGSILIIGGGPTGVELTGEIAVDFPEKEVTLVHNGSRLMQFIGPKASNKTLDWLRSK 189

Query: 683  KVEVLLEQTVDLNSVLDGEKTTYQTSKGETIAADCHFLCIGKPVGS-WLRETVLKDSLDS 859
            +VEV LEQ+V+LNSV DG + TYQTS GETI ADCHFLC G P+GS WL+ET LKD LD 
Sbjct: 190  RVEVKLEQSVNLNSVSDGSR-TYQTSAGETIEADCHFLCTGSPLGSAWLKETFLKDKLDI 248

Query: 860  RGRLMVEETLQVKGRKNVFAVGDITDIKEMKQGYLARKHAEAAIKNIKLLM 1012
             GRLMV++ L+VK   N+FA+GDITDI E+KQGYLA+KHAE    N+KLLM
Sbjct: 249  HGRLMVDKNLRVKDHSNIFAIGDITDIPEIKQGYLAQKHAEVVATNLKLLM 299


>ref|NP_190005.1| FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis
            thaliana] gi|7635464|emb|CAB88427.1| putative protein
            [Arabidopsis thaliana] gi|21536882|gb|AAM61214.1| unknown
            [Arabidopsis thaliana] gi|25083044|gb|AAN72037.1|
            putative protein [Arabidopsis thaliana]
            gi|30725576|gb|AAP37810.1| At3g44190 [Arabidopsis
            thaliana] gi|332644353|gb|AEE77874.1| FAD/NAD(P)-binding
            oxidoreductase family protein [Arabidopsis thaliana]
          Length = 367

 Score =  378 bits (970), Expect = e-102
 Identities = 189/276 (68%), Positives = 225/276 (81%), Gaps = 1/276 (0%)
 Frame = +2

Query: 191  AKELQFGAHVTLIDPKDFFEIPWANLRAMVEPSFAERSVFNHTEYFPNGRLVISHVVSIN 370
            +K LQF + +TLIDPK++FEI WA+LR+MVEP+FAERSV NH +Y  NGR+V S  V+I 
Sbjct: 27   SKFLQFDSDLTLIDPKEYFEIIWASLRSMVEPAFAERSVINHKKYLQNGRVVTSPAVNIT 86

Query: 371  KSEVVTADGECIPYDYLAVATGHEEPYPKTRAERLKQYEAEHEKIKASSSILIVGGGPTG 550
             ++V+TADG    YDYL +ATGH +  PKTR E+L QY+ EHEKIK+S SILIVGGGP+G
Sbjct: 87   DTDVLTADGLVFGYDYLVIATGHNDVLPKTRQEKLSQYQTEHEKIKSSESILIVGGGPSG 146

Query: 551  VELAGEIAVDFPEKKVTLVHKGSRLLEFVNAKASTKALDWLISKKVEVLLEQTVDLNSVL 730
            VELA EIAVDFPEKKVT+VH G RLLEFV  KA+ KALDW+ SK+VEV+L Q VDL+S  
Sbjct: 147  VELAAEIAVDFPEKKVTIVHNGPRLLEFVGQKAADKALDWMKSKRVEVILNQRVDLSSAS 206

Query: 731  DGEKTTYQTSKGETIAADCHFLCIGKPVGS-WLRETVLKDSLDSRGRLMVEETLQVKGRK 907
            DG K TY+TS GETI ADCHFLC GKP+ S WL+ TVLKD+LD +GRLMV+E L+VKGRK
Sbjct: 207  DGSK-TYRTSGGETIHADCHFLCTGKPLSSEWLKGTVLKDNLDGKGRLMVDEYLRVKGRK 265

Query: 908  NVFAVGDITDIKEMKQGYLARKHAEAAIKNIKLLMS 1015
            NVFA+GDITD+ EMKQGY+A KHA  A KNIKLLMS
Sbjct: 266  NVFAIGDITDVPEMKQGYIAEKHASVATKNIKLLMS 301



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +1

Query: 1153 QLPFMTISGCLPGLIKSRDLFVGKTRKTMGLTP 1251
            Q PFMT+SGC+PGLIKS+DLFVGKTRK  GL P
Sbjct: 330  QFPFMTVSGCIPGLIKSKDLFVGKTRKARGLDP 362


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