BLASTX nr result

ID: Coptis23_contig00012933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012933
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274761.2| PREDICTED: uncharacterized protein LOC100264...   218   4e-55
emb|CAN62237.1| hypothetical protein VITISV_014688 [Vitis vinifera]   218   7e-55
ref|XP_002463893.1| hypothetical protein SORBIDRAFT_01g008410 [S...   216   3e-54
ref|XP_002520949.1| conserved hypothetical protein [Ricinus comm...   213   2e-53
ref|XP_003559436.1| PREDICTED: BEACH domain-containing protein l...   212   4e-53

>ref|XP_002274761.2| PREDICTED: uncharacterized protein LOC100264735 [Vitis vinifera]
          Length = 3544

 Score =  218 bits (556), Expect = 4e-55
 Identities = 121/189 (64%), Positives = 140/189 (74%)
 Frame = +2

Query: 2    AGVCGNSVNRTRLHTVISSQTFYDLLSESGLLCVDCEKXXXXXXXXXXXXXXXPPSCVLT 181
            AGV  N+ NRT+LHT+I SQTFYDLL ESGLL V+ EK               PP   LT
Sbjct: 844  AGVFDNAANRTKLHTIILSQTFYDLLCESGLLSVEWEKQVIQLLLELALEIVLPPP--LT 901

Query: 182  SESTPPSAMAEAGSANFFLISAASGSFNPSRERVYNAGAIGVLIRCLLLFTPKVQLDLLA 361
            SE T PS M+E GS+ F L +  SGSFNP +ERVYNAGA+ VLIR LLLFTPKVQL++L 
Sbjct: 902  SELTTPSDMSETGSSTFVL-ATPSGSFNPDKERVYNAGAVRVLIRSLLLFTPKVQLEVLN 960

Query: 362  FIEKLAHGSPFNQENLTSIGCLGLLLETIRPFLLGSSSLRSHALQIVEVLGAYRLSSSEL 541
             I+KLA   P+NQENLTS+GC+ LLLE I PFLLG S L S+AL+IVEVLGAYRLS+SEL
Sbjct: 961  IIDKLARAGPYNQENLTSVGCVELLLEIIHPFLLGLSPLLSYALKIVEVLGAYRLSTSEL 1020

Query: 542  *VLVRYILQ 568
             VL+RYILQ
Sbjct: 1021 RVLIRYILQ 1029


>emb|CAN62237.1| hypothetical protein VITISV_014688 [Vitis vinifera]
          Length = 3508

 Score =  218 bits (554), Expect = 7e-55
 Identities = 121/189 (64%), Positives = 140/189 (74%)
 Frame = +2

Query: 2    AGVCGNSVNRTRLHTVISSQTFYDLLSESGLLCVDCEKXXXXXXXXXXXXXXXPPSCVLT 181
            AGV  N+ NRT+LHT+I SQTF DLL ESGLL V+ EK               PP   LT
Sbjct: 763  AGVFDNAANRTKLHTIILSQTFXDLLCESGLLSVEWEKQVIQLLLELALEIVLPPP--LT 820

Query: 182  SESTPPSAMAEAGSANFFLISAASGSFNPSRERVYNAGAIGVLIRCLLLFTPKVQLDLLA 361
            SE T PS M+E GS+ F L +  SGSFNP +ERVYNAGA+ VLIR LLLFTPKVQL++L 
Sbjct: 821  SELTTPSDMSETGSSTFVL-ATPSGSFNPDKERVYNAGAVRVLIRSLLLFTPKVQLEVLN 879

Query: 362  FIEKLAHGSPFNQENLTSIGCLGLLLETIRPFLLGSSSLRSHALQIVEVLGAYRLSSSEL 541
             I+KLA   P+NQENLTS+GC+ LLLE I PFLLGSS L S+AL+IVEVLGAYRLS+SEL
Sbjct: 880  IIDKLARAGPYNQENLTSVGCVELLLEIIHPFLLGSSPLLSYALKIVEVLGAYRLSTSEL 939

Query: 542  *VLVRYILQ 568
             VL+RYILQ
Sbjct: 940  RVLIRYILQ 948


>ref|XP_002463893.1| hypothetical protein SORBIDRAFT_01g008410 [Sorghum bicolor]
            gi|241917747|gb|EER90891.1| hypothetical protein
            SORBIDRAFT_01g008410 [Sorghum bicolor]
          Length = 3513

 Score =  216 bits (549), Expect = 3e-54
 Identities = 119/189 (62%), Positives = 135/189 (71%)
 Frame = +2

Query: 2    AGVCGNSVNRTRLHTVISSQTFYDLLSESGLLCVDCEKXXXXXXXXXXXXXXXPPSCVLT 181
            A VC NSVNR RLHT++SS TFYDLLSESGLLCVDCEK               PP+  L 
Sbjct: 783  AAVCNNSVNRIRLHTILSSNTFYDLLSESGLLCVDCEKQVILLLLELALEIVLPPTSNLQ 842

Query: 182  SESTPPSAMAEAGSANFFLISAASGSFNPSRERVYNAGAIGVLIRCLLLFTPKVQLDLLA 361
             ES       +  S   FL + + G     +ERVYNA AI VLIRCLL+FTPKVQL+LL 
Sbjct: 843  VESISSETSEDELS---FLSATSFGLSRLDKERVYNASAIVVLIRCLLVFTPKVQLELLR 899

Query: 362  FIEKLAHGSPFNQENLTSIGCLGLLLETIRPFLLGSSSLRSHALQIVEVLGAYRLSSSEL 541
            FIEKLA   PFNQENLTS+GC+GLLLETI PFL GSS + +HAL+IVE+LGAYRLSSSEL
Sbjct: 900  FIEKLAIAGPFNQENLTSVGCVGLLLETISPFLEGSSPILNHALRIVELLGAYRLSSSEL 959

Query: 542  *VLVRYILQ 568
             +LVRYILQ
Sbjct: 960  RLLVRYILQ 968


>ref|XP_002520949.1| conserved hypothetical protein [Ricinus communis]
            gi|223539786|gb|EEF41366.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3591

 Score =  213 bits (541), Expect = 2e-53
 Identities = 114/189 (60%), Positives = 140/189 (74%)
 Frame = +2

Query: 2    AGVCGNSVNRTRLHTVISSQTFYDLLSESGLLCVDCEKXXXXXXXXXXXXXXXPPSCVLT 181
            AGVC N++NRT+LH++I SQTFYDLL+ESGLL V+CEK               PP   L+
Sbjct: 842  AGVCDNAINRTKLHSIILSQTFYDLLAESGLLSVECEKRVIQLLLELALEIVIPP--FLS 899

Query: 182  SESTPPSAMAEAGSANFFLISAASGSFNPSRERVYNAGAIGVLIRCLLLFTPKVQLDLLA 361
            SES   + M E+ SA   LI   SG FNP++ERVYNAGA+ VL+R LLLFTPKVQL+LL 
Sbjct: 900  SESATTADMVESESAGS-LIMTTSGLFNPNKERVYNAGAVRVLLRSLLLFTPKVQLELLN 958

Query: 362  FIEKLAHGSPFNQENLTSIGCLGLLLETIRPFLLGSSSLRSHALQIVEVLGAYRLSSSEL 541
             I +LA   PFNQENLTS+GC+ LLLE I PFLLGSS L S+ L+IVEVLGAY+LS+SEL
Sbjct: 959  LINQLARAGPFNQENLTSVGCVELLLEIIHPFLLGSSPLLSYVLKIVEVLGAYKLSASEL 1018

Query: 542  *VLVRYILQ 568
             +L+RY++Q
Sbjct: 1019 RLLIRYVVQ 1027


>ref|XP_003559436.1| PREDICTED: BEACH domain-containing protein lvsA-like [Brachypodium
            distachyon]
          Length = 3566

 Score =  212 bits (539), Expect = 4e-53
 Identities = 116/189 (61%), Positives = 135/189 (71%)
 Frame = +2

Query: 2    AGVCGNSVNRTRLHTVISSQTFYDLLSESGLLCVDCEKXXXXXXXXXXXXXXXPPSCVLT 181
            A VC N+VNR RLHT++SS TFYDLLSESGLLCVDCEK               PP+  L 
Sbjct: 833  AAVCNNAVNRIRLHTILSSHTFYDLLSESGLLCVDCEKQVILLLLELALEIVLPPTSNLQ 892

Query: 182  SESTPPSAMAEAGSANFFLISAASGSFNPSRERVYNAGAIGVLIRCLLLFTPKVQLDLLA 361
             ES   ++  E+G    FL + + G      ER YNA A+ VLIR LL+FTPKVQL+LL 
Sbjct: 893  VESLSETSEDESG----FLSATSFGLSRLDGERAYNASAVVVLIRSLLVFTPKVQLELLR 948

Query: 362  FIEKLAHGSPFNQENLTSIGCLGLLLETIRPFLLGSSSLRSHALQIVEVLGAYRLSSSEL 541
            FIEKLA   PFNQENL+S+GC+GLLLETI PFL GSS + +HAL+IVEVLGAYRLSSSEL
Sbjct: 949  FIEKLASAGPFNQENLSSVGCVGLLLETINPFLEGSSPILNHALKIVEVLGAYRLSSSEL 1008

Query: 542  *VLVRYILQ 568
             +LVRYILQ
Sbjct: 1009 RLLVRYILQ 1017


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