BLASTX nr result

ID: Coptis23_contig00012874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012874
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17183.3| unnamed protein product [Vitis vinifera]              109   1e-21
ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265...   107   6e-21
ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17
ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15
ref|XP_003565040.1| PREDICTED: uncharacterized protein LOC100823...    87   5e-15

>emb|CBI17183.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  109 bits (272), Expect = 1e-21
 Identities = 54/94 (57%), Positives = 61/94 (64%)
 Frame = -3

Query: 471 VKKEFIMLDKSTTQPTGLKTNVLWGWCFIVFGCMSFLGFFYAAVLSKLLPPSDNPVLSAI 292
           V K  IM    T+Q    K  V WGW F++FG + FLGF YAAV+SKLLPPS N ++SAI
Sbjct: 68  VIKTSIMNTSITSQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAI 127

Query: 291 QKDRYYCXXXXXXXXXXXXXVYFHWLSMKLFKHA 190
           QKDRYYC             VYFHWLSMKLFKHA
Sbjct: 128 QKDRYYCFLVPLTIPILIVAVYFHWLSMKLFKHA 161


>ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265449 [Vitis vinifera]
          Length = 88

 Score =  107 bits (266), Expect = 6e-21
 Identities = 50/83 (60%), Positives = 57/83 (68%)
 Frame = -3

Query: 438 TTQPTGLKTNVLWGWCFIVFGCMSFLGFFYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXX 259
           T+Q    K  V WGW F++FG + FLGF YAAV+SKLLPPS N ++SAIQKDRYYC    
Sbjct: 6   TSQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVP 65

Query: 258 XXXXXXXXXVYFHWLSMKLFKHA 190
                    VYFHWLSMKLFKHA
Sbjct: 66  LTIPILIVAVYFHWLSMKLFKHA 88


>ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|222849758|gb|EEE87305.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 44/76 (57%), Positives = 53/76 (69%)
 Frame = -3

Query: 417 KTNVLWGWCFIVFGCMSFLGFFYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXX 238
           +T    GW FI+ G +SF+GF +AAV+SKLLP SDNP++SAIQ DRYYC           
Sbjct: 10  ETATFRGWLFILMGSVSFVGFLFAAVISKLLPLSDNPIISAIQNDRYYCFLVPLTLPILV 69

Query: 237 XXVYFHWLSMKLFKHA 190
             VYFHWLSMK+FKHA
Sbjct: 70  SAVYFHWLSMKMFKHA 85


>ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|222859557|gb|EEE97104.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 43/76 (56%), Positives = 50/76 (65%)
 Frame = -3

Query: 417 KTNVLWGWCFIVFGCMSFLGFFYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXX 238
           KT    GW  I+ G +SF+GF  AAV+SKLLP SD+P++SAIQ DRYYC           
Sbjct: 5   KTATFSGWLLILIGSVSFVGFLSAAVISKLLPLSDSPIISAIQNDRYYCFLVPLTLPILI 64

Query: 237 XXVYFHWLSMKLFKHA 190
             VY HWLSMKLFKHA
Sbjct: 65  IAVYSHWLSMKLFKHA 80


>ref|XP_003565040.1| PREDICTED: uncharacterized protein LOC100823748 [Brachypodium
           distachyon]
          Length = 79

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 42/72 (58%), Positives = 49/72 (68%)
 Frame = -3

Query: 405 LWGWCFIVFGCMSFLGFFYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXXXXVY 226
           L G  F+ FG + F+GFFYAAV+SKLLPP +N +LSAIQ DRYYC             VY
Sbjct: 8   LVGSAFVAFGILLFVGFFYAAVVSKLLPPYENRLLSAIQNDRYYCLLVPLTLPVIIVAVY 67

Query: 225 FHWLSMKLFKHA 190
            HWLSMK+FKHA
Sbjct: 68  LHWLSMKMFKHA 79


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