BLASTX nr result

ID: Coptis23_contig00012858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012858
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kD...    87   1e-15
emb|CBI25945.3| unnamed protein product [Vitis vinifera]               87   1e-15
emb|CBI25992.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kD...    87   2e-15
gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana]              85   5e-15

>ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kDa protein-like [Vitis
           vinifera]
          Length = 62

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/57 (71%), Positives = 47/57 (82%)
 Frame = +3

Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPEK 278
           EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E+
Sbjct: 4   EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEE 60


>emb|CBI25945.3| unnamed protein product [Vitis vinifera]
          Length = 169

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/56 (73%), Positives = 46/56 (82%)
 Frame = +3

Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275
           EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E
Sbjct: 38  EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIE 93


>emb|CBI25992.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/56 (73%), Positives = 46/56 (82%)
 Frame = +3

Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275
           EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E
Sbjct: 81  EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 136


>ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis
           vinifera]
          Length = 135

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/56 (73%), Positives = 46/56 (82%)
 Frame = +3

Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275
           EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP   EI DCC HL+L  A E
Sbjct: 4   EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 59


>gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana]
          Length = 242

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/54 (68%), Positives = 45/54 (83%)
 Frame = +3

Query: 114 IDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275
           I+IKKW+V YP+YINSKKT+A+GRRIS SK+CENP   EI DCC+HL+L  A E
Sbjct: 6   INIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVE 59


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