BLASTX nr result
ID: Coptis23_contig00012858
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012858 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kD... 87 1e-15 emb|CBI25945.3| unnamed protein product [Vitis vinifera] 87 1e-15 emb|CBI25992.3| unnamed protein product [Vitis vinifera] 87 2e-15 ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kD... 87 2e-15 gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana] 85 5e-15 >ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kDa protein-like [Vitis vinifera] Length = 62 Score = 87.4 bits (215), Expect = 1e-15 Identities = 41/57 (71%), Positives = 47/57 (82%) Frame = +3 Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPEK 278 EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E+ Sbjct: 4 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEE 60 >emb|CBI25945.3| unnamed protein product [Vitis vinifera] Length = 169 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/56 (73%), Positives = 46/56 (82%) Frame = +3 Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275 EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E Sbjct: 38 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIE 93 >emb|CBI25992.3| unnamed protein product [Vitis vinifera] Length = 212 Score = 86.7 bits (213), Expect = 2e-15 Identities = 41/56 (73%), Positives = 46/56 (82%) Frame = +3 Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275 EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E Sbjct: 81 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 136 >ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis vinifera] Length = 135 Score = 86.7 bits (213), Expect = 2e-15 Identities = 41/56 (73%), Positives = 46/56 (82%) Frame = +3 Query: 108 EVIDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275 EV +IKKWIVFYP+YINSKKTIA+GRR+S SKACENP EI DCC HL+L A E Sbjct: 4 EVPNIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIE 59 >gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana] Length = 242 Score = 85.1 bits (209), Expect = 5e-15 Identities = 37/54 (68%), Positives = 45/54 (83%) Frame = +3 Query: 114 IDIKKWIVFYPIYINSKKTIAQGRRISASKACENPKYDEIYDCCRHLQLRCAPE 275 I+IKKW+V YP+YINSKKT+A+GRRIS SK+CENP EI DCC+HL+L A E Sbjct: 6 INIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVE 59