BLASTX nr result

ID: Coptis23_contig00012854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012854
         (2172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307927.1| predicted protein [Populus trichocarpa] gi|2...   254   5e-65
ref|XP_003517539.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...   247   8e-63
ref|XP_002265259.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...   245   3e-62
emb|CAN70759.1| hypothetical protein VITISV_012852 [Vitis vinifera]   245   3e-62
ref|NP_001239942.1| uncharacterized protein LOC100818745 [Glycin...   241   8e-61

>ref|XP_002307927.1| predicted protein [Populus trichocarpa] gi|222853903|gb|EEE91450.1|
            predicted protein [Populus trichocarpa]
          Length = 190

 Score =  254 bits (650), Expect = 5e-65
 Identities = 119/184 (64%), Positives = 136/184 (73%), Gaps = 7/184 (3%)
 Frame = +3

Query: 1338 KNNSSY----YIPLEQSEIIRNA---NDTSSSSAPPPLSHDDEWTSGICACCDDMHSCCL 1496
            K  SSY    YIPL+QS++   +   N+  S +A        +W+SGICACCDDM SCC+
Sbjct: 2    KGESSYVPPRYIPLDQSDLETESVPRNEERSGAASVVGDGPAQWSSGICACCDDMQSCCI 61

Query: 1497 GLICPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNALCCMLTDGTLCCLPGCFVACYAC 1676
            GL CPC+LFGKNAEFLGSGTL GSC THFILW +VN +CC +TDG L  LPGCFVACYAC
Sbjct: 62   GLFCPCYLFGKNAEFLGSGTLIGSCATHFILWALVNTVCCCMTDGILLGLPGCFVACYAC 121

Query: 1677 GYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPPV 1856
            GYRR LR KY+L E PCGDL TH FCH+CA CQEYREIRERS DS   + KLA V APPV
Sbjct: 122  GYRRVLREKYNLQEAPCGDLVTHFFCHLCANCQEYREIRERSGDSNSPDLKLAVVTAPPV 181

Query: 1857 QRMD 1868
            Q M+
Sbjct: 182  QTME 185


>ref|XP_003517539.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like [Glycine max]
          Length = 185

 Score =  247 bits (631), Expect = 8e-63
 Identities = 116/185 (62%), Positives = 129/185 (69%), Gaps = 4/185 (2%)
 Frame = +3

Query: 1338 KNNSSY----YIPLEQSEIIRNANDTSSSSAPPPLSHDDEWTSGICACCDDMHSCCLGLI 1505
            KN   Y    YIPL QS+    A D S  S         +W+SGICACCDDM SCC+G +
Sbjct: 2    KNQHGYVPPAYIPLGQSD--SEAVDVSLLSTNGSNQMQAQWSSGICACCDDMQSCCIGCL 59

Query: 1506 CPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNALCCMLTDGTLCCLPGCFVACYACGYR 1685
            CPCFLFGKNAEFLGSGT  GSC+THFILW +VN  CC+LTDG    LPGC V+CYACGYR
Sbjct: 60   CPCFLFGKNAEFLGSGTFLGSCVTHFILWSVVNTACCLLTDGLFWGLPGCLVSCYACGYR 119

Query: 1686 RTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPPVQRM 1865
            + LRSKY+LPE PCGD  TH  CH CAICQEYREIRERS D    + KLA V APP+Q M
Sbjct: 120  KALRSKYNLPEAPCGDFVTHFCCHPCAICQEYREIRERSGDCEATDLKLAVVAAPPIQTM 179

Query: 1866 DLTSK 1880
               SK
Sbjct: 180  QSDSK 184


>ref|XP_002265259.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 10-like isoform 1 [Vitis
            vinifera] gi|297741748|emb|CBI32880.3| unnamed protein
            product [Vitis vinifera]
          Length = 188

 Score =  245 bits (626), Expect = 3e-62
 Identities = 119/194 (61%), Positives = 139/194 (71%), Gaps = 12/194 (6%)
 Frame = +3

Query: 1338 KNNSSY----YIPLEQS----EIIRNANDTS----SSSAPPPLSHDDEWTSGICACCDDM 1481
            K   SY    YIPL QS    EI+ + +D      +S +P       +W+SGICACCDDM
Sbjct: 2    KGQGSYVPPPYIPLGQSDSEVEIVPHDSDLPDHRHTSDSP------SQWSSGICACCDDM 55

Query: 1482 HSCCLGLICPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNALCCMLTDGTLCCLPGCFV 1661
             SCC+G  CPCFLF KNAEFLGSGTLAGSC+TH I W +VN +CC+L+DGTL  LPGCFV
Sbjct: 56   QSCCIGFFCPCFLFAKNAEFLGSGTLAGSCMTHLIFWALVNTVCCLLSDGTLLGLPGCFV 115

Query: 1662 ACYACGYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEV 1841
            ACYACGYRR LRSKY+L E PCGD TTH FCH+CAICQEYREIRERS      + +L+ V
Sbjct: 116  ACYACGYRRALRSKYNLQEAPCGDFTTHFFCHLCAICQEYREIRERS-GPETPDLRLSVV 174

Query: 1842 IAPPVQRMDLTSKD 1883
             APPVQ M+  SK+
Sbjct: 175  TAPPVQTMETASKE 188


>emb|CAN70759.1| hypothetical protein VITISV_012852 [Vitis vinifera]
          Length = 188

 Score =  245 bits (626), Expect = 3e-62
 Identities = 119/194 (61%), Positives = 139/194 (71%), Gaps = 12/194 (6%)
 Frame = +3

Query: 1338 KNNSSY----YIPLEQS----EIIRNANDTS----SSSAPPPLSHDDEWTSGICACCDDM 1481
            K   SY    YIPL QS    EI+ + +D      +S +P       +W+SGICACCDDM
Sbjct: 2    KGQGSYVPPPYIPLGQSDSEVEIVPHDSDLPXHRHTSDSP------SQWSSGICACCDDM 55

Query: 1482 HSCCLGLICPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNALCCMLTDGTLCCLPGCFV 1661
             SCC+G  CPCFLF KNAEFLGSGTLAGSC+TH I W +VN +CC+L+DGTL  LPGCFV
Sbjct: 56   QSCCIGFFCPCFLFAKNAEFLGSGTLAGSCMTHLIFWALVNTVCCLLSDGTLLGLPGCFV 115

Query: 1662 ACYACGYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEV 1841
            ACYACGYRR LRSKY+L E PCGD TTH FCH+CAICQEYREIRERS      + +L+ V
Sbjct: 116  ACYACGYRRALRSKYNLQEAPCGDFTTHFFCHLCAICQEYREIRERS-GPETPDLRLSVV 174

Query: 1842 IAPPVQRMDLTSKD 1883
             APPVQ M+  SK+
Sbjct: 175  TAPPVQTMETASKE 188


>ref|NP_001239942.1| uncharacterized protein LOC100818745 [Glycine max]
            gi|255639395|gb|ACU19993.1| unknown [Glycine max]
          Length = 188

 Score =  241 bits (614), Expect = 8e-61
 Identities = 115/188 (61%), Positives = 129/188 (68%), Gaps = 7/188 (3%)
 Frame = +3

Query: 1338 KNNSSY----YIPLEQSEIIRNANDTS---SSSAPPPLSHDDEWTSGICACCDDMHSCCL 1496
            KN   Y    YIPL  S+    A D S    SS         +W+SGICACCDDM SCC+
Sbjct: 2    KNQHGYVPPAYIPLGPSD--SEAVDVSLLQRSSTNGSNQMQAQWSSGICACCDDMQSCCI 59

Query: 1497 GLICPCFLFGKNAEFLGSGTLAGSCITHFILWGIVNALCCMLTDGTLCCLPGCFVACYAC 1676
            G +CPCFLFGKNA+FLGSGT  GSC+THFILW +VN  CC+LTDG    LPGC V+CYAC
Sbjct: 60   GCLCPCFLFGKNADFLGSGTFLGSCVTHFILWSVVNTACCLLTDGLFWGLPGCLVSCYAC 119

Query: 1677 GYRRTLRSKYDLPEVPCGDLTTHLFCHMCAICQEYREIRERSIDSRQLNFKLAEVIAPPV 1856
            GYR+ LRSKY+LPE PCGD  TH  CH CAICQEYREIRERS D    + KLA V APP+
Sbjct: 120  GYRKALRSKYNLPEAPCGDFVTHFCCHPCAICQEYREIRERSGDCEATDLKLAVVTAPPI 179

Query: 1857 QRMDLTSK 1880
            Q M   SK
Sbjct: 180  QTMHSDSK 187


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