BLASTX nr result

ID: Coptis23_contig00012838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012838
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512966.1| DNA replication licensing factor MCM4, putat...    91   1e-16
ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
emb|CBI38018.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...    90   2e-16
ref|XP_003540982.1| PREDICTED: DNA replication licensing factor ...    87   1e-15

>ref|XP_002512966.1| DNA replication licensing factor MCM4, putative [Ricinus communis]
           gi|223547977|gb|EEF49469.1| DNA replication licensing
           factor MCM4, putative [Ricinus communis]
          Length = 867

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +1

Query: 193 VEKPDVAEAFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLS 345
           VEK DV EAFRLLEVA+QQSATDH+TGTIDMDLITTGVSASERMRRENL+S
Sbjct: 754 VEKHDVIEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRENLVS 804


>ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|222849431|gb|EEE86978.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = +1

Query: 193 VEKPDVAEAFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLS 345
           VEK DV EAFRLLEVA+QQSATDH+TGTIDMDLITTGVSASERMRRENL S
Sbjct: 630 VEKHDVIEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRENLAS 680


>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +1

Query: 193 VEKPDVAEAFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLS 345
           VEK DV EAFRLLEVALQQSATDH+TGTIDMDLITTGVSASERMRRE+L+S
Sbjct: 721 VEKRDVMEAFRLLEVALQQSATDHSTGTIDMDLITTGVSASERMRRESLVS 771


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +1

Query: 193 VEKPDVAEAFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENLLS 345
           VEK DV EAFRLLEVALQQSATDH+TGTIDMDLITTGVSASERMRRE+L+S
Sbjct: 727 VEKRDVMEAFRLLEVALQQSATDHSTGTIDMDLITTGVSASERMRRESLVS 777


>ref|XP_003540982.1| PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine
           max]
          Length = 839

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = +1

Query: 193 VEKPDVAEAFRLLEVALQQSATDHATGTIDMDLITTGVSASERMRRENL 339
           VEK DV EAFRLLEVA+QQSATDH+TGTIDMDLITTGVSASERMRRE+L
Sbjct: 726 VEKHDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESL 774


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