BLASTX nr result

ID: Coptis23_contig00012829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012829
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327083.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
gb|AFK39805.1| unknown [Lotus japonicus]                              105   5e-21
emb|CBI19619.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002281932.1| PREDICTED: uncharacterized protein LOC100245...   103   1e-20
ref|XP_002510323.1| conserved hypothetical protein [Ricinus comm...   102   4e-20

>ref|XP_002327083.1| predicted protein [Populus trichocarpa] gi|222835398|gb|EEE73833.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/92 (58%), Positives = 70/92 (76%)
 Frame = +2

Query: 2   FLVGSAMLMFGFGLYVMFMGTRNMNSKXXXXXXXXXXXXXXRLKVIPAWVEMQSVSQAKS 181
           FLVG+AML+FG GLYVMF+G++N   +               LK +P WVEM+SVSQAKS
Sbjct: 182 FLVGTAMLIFGVGLYVMFVGSKNPKDEALSLPDSNLFGLFS-LKSLPTWVEMRSVSQAKS 240

Query: 182 QIGHSVLMILQVGVLEKFKSVPLVTALDLACF 277
           +IGH+++MILQVG+LEKFK++PL T+LDLACF
Sbjct: 241 KIGHAIMMILQVGMLEKFKNIPLATSLDLACF 272


>gb|AFK39805.1| unknown [Lotus japonicus]
          Length = 292

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = +2

Query: 2   FLVGSAMLMFGFGLYVMFMGTRNMNSKXXXXXXXXXXXXXXRLKVIPAWVEMQSVSQAKS 181
           FL+G+A+L+FG GLYVMF+G+R  N +               ++  P WV M S+ QAKS
Sbjct: 181 FLLGTALLVFGVGLYVMFVGSRTTNKEKEPWHCESNLLGLFHMQSPPRWVGMHSIEQAKS 240

Query: 182 QIGHSVLMILQVGVLEKFKSVPLVTALDLACF 277
           +IGH+V+MILQVG+LEKFK +PLVT+LDLACF
Sbjct: 241 KIGHAVMMILQVGLLEKFKDIPLVTSLDLACF 272


>emb|CBI19619.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/91 (56%), Positives = 66/91 (72%)
 Frame = +2

Query: 2   FLVGSAMLMFGFGLYVMFMGTRNMNSKXXXXXXXXXXXXXXRLKVIPAWVEMQSVSQAKS 181
           FL+G+ ML+FG GL+VMF+G++ M  K               L+ IP WV +QSVSQAKS
Sbjct: 177 FLLGTVMLVFGMGLHVMFVGSKTMQGKGQWLSDSNLFGLFS-LRTIPTWVRIQSVSQAKS 235

Query: 182 QIGHSVLMILQVGVLEKFKSVPLVTALDLAC 274
           +IGH+++MILQVGVLEKF+S+PL T LDLAC
Sbjct: 236 RIGHAIMMILQVGVLEKFQSIPLATGLDLAC 266


>ref|XP_002281932.1| PREDICTED: uncharacterized protein LOC100245440 [Vitis vinifera]
          Length = 294

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/91 (56%), Positives = 66/91 (72%)
 Frame = +2

Query: 2   FLVGSAMLMFGFGLYVMFMGTRNMNSKXXXXXXXXXXXXXXRLKVIPAWVEMQSVSQAKS 181
           FL+G+ ML+FG GL+VMF+G++ M  K               L+ IP WV +QSVSQAKS
Sbjct: 177 FLLGTVMLVFGMGLHVMFVGSKTMQGKGQWLSDSNLFGLFS-LRTIPTWVRIQSVSQAKS 235

Query: 182 QIGHSVLMILQVGVLEKFKSVPLVTALDLAC 274
           +IGH+++MILQVGVLEKF+S+PL T LDLAC
Sbjct: 236 RIGHAIMMILQVGVLEKFQSIPLATGLDLAC 266


>ref|XP_002510323.1| conserved hypothetical protein [Ricinus communis]
           gi|223551024|gb|EEF52510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/92 (53%), Positives = 68/92 (73%)
 Frame = +2

Query: 2   FLVGSAMLMFGFGLYVMFMGTRNMNSKXXXXXXXXXXXXXXRLKVIPAWVEMQSVSQAKS 181
           +LVG+AML+FG GLY +F+G++                    LK +P WV+++SVSQAKS
Sbjct: 178 YLVGTAMLIFGVGLYAIFVGSKGSKGNGQWLPESNLFGLFY-LKTLPTWVQVESVSQAKS 236

Query: 182 QIGHSVLMILQVGVLEKFKSVPLVTALDLACF 277
           +IGH+V+MILQVG+LEKFK++P+VT+LDLACF
Sbjct: 237 RIGHAVMMILQVGLLEKFKNIPVVTSLDLACF 268


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