BLASTX nr result

ID: Coptis23_contig00012823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012823
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trich...    66   4e-09
emb|CBI22338.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002263761.2| PREDICTED: disease resistance protein At4g27...    61   1e-07
emb|CBI22408.3| unnamed protein product [Vitis vinifera]               61   1e-07
emb|CAN65562.1| hypothetical protein VITISV_009359 [Vitis vinifera]    61   1e-07

>ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834261|gb|EEE72738.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1340

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
 Frame = +2

Query: 5    EIMGVANLKLWNLYRGET-ENIPPNIISSFSGLEELHM---LVNEFGDGSSC----ASFA 160
            EI  +  L L +L   E  E I PN++SS + LEEL+M    V    +GSS     A  +
Sbjct: 605  EIGKLTRLLLLDLSNCERLEVISPNVLSSLTRLEELYMGNSFVKWETEGSSSQRNNACLS 664

Query: 161  EVASLTCLISLRLRVQNATFLAKDAAFGLQNLQTFSILVNASDNIVYRFALKYRTRTMFL 340
            E+  L+ LI+L +++ +A  + KD +F  Q L+ F I +       + +++KY T     
Sbjct: 665  ELKRLSNLITLHMQITDADNMLKDLSFLFQKLERFRIFIGDG----WDWSVKYATSRTLK 720

Query: 341  NMLGASEEFAPWVSKLLGKTEYLELWSYGQEYLKNV----GQLDAGGQFNKLKCLRLIDC 508
              L    +   WV+ LL  TE L L     + LK V      LD G  F +LK L + +C
Sbjct: 721  LKLNTVIQLEEWVNTLLKSTEELHL-----QELKGVKSILNDLD-GEDFPRLKHLHVQNC 774

Query: 509  PKIEHILS 532
            P +++I++
Sbjct: 775  PGVQYIIN 782


>emb|CBI22338.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
 Frame = +2

Query: 5   EIMGVANLKLWNLYR-GETENIPPNIISSFSGLEELHML---VNEFGDGSSCASFAEVAS 172
           E++ + NL+L +L    E E IP NI+SS S LE L M+        +G S A  +E+  
Sbjct: 200 EMVQLTNLRLLDLDDCEELEVIPRNILSSLSRLECLSMISSFTKWVVEGESNACLSELNH 259

Query: 173 LTCLISLRLRVQNATFLAKDAAFGLQNLQTFSILVNASDNIVYRFALKYRTRTMFLNMLG 352
           L+ L +L + + +A  L KD  F  +NL ++ IL+   D   +R       RT+ L  + 
Sbjct: 260 LSYLTNLSIEIPDAKLLPKDILF--ENLTSYVILIGDDDRQEFR-----TKRTLKLQSVN 312

Query: 353 ASEEFAPWVSKLLGKTEYLELWSY-GQEYLKNVGQLDAGGQFNKLKCLRLIDCPKIEHIL 529
            S      +SKLL ++E LE     G  Y   V  L     F +LK L++ D P I +I+
Sbjct: 313 RSLHLGDGISKLLERSEELEFVELSGTRY---VFYLSDRESFLELKHLQVSDSPNIRYII 369


>ref|XP_002263761.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1677

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
 Frame = +2

Query: 5    EIMGVANLKLWNLY-RGETENIPPNIISSFSGLEELHMLVNEF----GDGSSCASFAEVA 169
            EI  + +L+L +L    + + IP  +ISS S LE L M  N F    G+G S A  AE+ 
Sbjct: 615  EIAQLTHLRLLDLSGSSKLKVIPSGVISSLSQLENLCM-ANSFTQWEGEGKSNACLAELK 673

Query: 170  SLTCLISLRLRVQNATFLAKDAAFGLQNLQTFSILVNASDNIVYRFALKYRT-RTMFLNM 346
             L+ L SL +++++A  L KD  F   NL  + I V      V+ +   + T +T+ LN 
Sbjct: 674  HLSHLTSLDIQIRDAKLLPKDIVF--DNLVRYRIFVGD----VWSWREIFETNKTLKLNK 727

Query: 347  LGASEEFAPWVSKLLGKTEYLELWSY--GQEYLKNVGQLDAGGQFNKLKCLRLIDCPKIE 520
            L  S      + KLL +TE L L     G   L    +LD  G F KLK L +   P+I+
Sbjct: 728  LDTSLHLVDGIIKLLKRTEDLHLHELCGGTNVL---SKLDGEG-FLKLKHLNVESSPEIQ 783

Query: 521  HIL-SVDVT 544
            +I+ S+D+T
Sbjct: 784  YIVNSMDLT 792


>emb|CBI22408.3| unnamed protein product [Vitis vinifera]
          Length = 1224

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
 Frame = +2

Query: 5    EIMGVANLKLWNLY-RGETENIPPNIISSFSGLEELHMLVNEF----GDGSSCASFAEVA 169
            EI  + +L+L +L    + + IP  +ISS S LE L M  N F    G+G S A  AE+ 
Sbjct: 523  EIAQLTHLRLLDLSGSSKLKVIPSGVISSLSQLENLCM-ANSFTQWEGEGKSNACLAELK 581

Query: 170  SLTCLISLRLRVQNATFLAKDAAFGLQNLQTFSILVNASDNIVYRFALKYRT-RTMFLNM 346
             L+ L SL +++++A  L KD  F   NL  + I V      V+ +   + T +T+ LN 
Sbjct: 582  HLSHLTSLDIQIRDAKLLPKDIVF--DNLVRYRIFVGD----VWSWREIFETNKTLKLNK 635

Query: 347  LGASEEFAPWVSKLLGKTEYLELWSY--GQEYLKNVGQLDAGGQFNKLKCLRLIDCPKIE 520
            L  S      + KLL +TE L L     G   L    +LD  G F KLK L +   P+I+
Sbjct: 636  LDTSLHLVDGIIKLLKRTEDLHLHELCGGTNVL---SKLDGEG-FLKLKHLNVESSPEIQ 691

Query: 521  HIL-SVDVT 544
            +I+ S+D+T
Sbjct: 692  YIVNSMDLT 700


>emb|CAN65562.1| hypothetical protein VITISV_009359 [Vitis vinifera]
          Length = 1460

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
 Frame = +2

Query: 5    EIMGVANLKLWNLY-RGETENIPPNIISSFSGLEELHMLVNEF----GDGSSCASFAEVA 169
            EI  + +L+L++L    + + IPP++ISS   LE+L M  N F    G+G S A  AE+ 
Sbjct: 613  EIAQLTHLRLFDLKDSSKLKVIPPDVISSLFRLEDLCM-ENSFTQWEGEGKSNACLAELK 671

Query: 170  SLTCLISLRLRVQNATFLAKDAAFGLQNLQTFSILVNASDNIVYRFALKYRTRTMFLNML 349
             L+ L SL +++ +A  L KD  F  +NL  + I V    N+     +     T+ LN  
Sbjct: 672  HLSHLTSLDIQIPDAKLLPKDIVF--ENLVRYRIFVG---NVWSWKEIFKANSTLKLNKF 726

Query: 350  GASEEFAPWVSKLLGKTEYLELWSY--GQEYLKNVGQLDAGGQFNKLKCLRLIDCPKIEH 523
              S      +SKLL +TE L L     G   L  + +      F KLK L +   P+I++
Sbjct: 727  DTSLHLVDGISKLLKRTEDLHLRELCGGTNVLSKLNR----EGFLKLKHLNVESSPEIQY 782

Query: 524  IL-SVDVT 544
            I+ S+D+T
Sbjct: 783  IVNSMDLT 790


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