BLASTX nr result

ID: Coptis23_contig00012743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012743
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281763.2| PREDICTED: uncharacterized protein LOC100254...   404   e-110
ref|XP_004149889.1| PREDICTED: uncharacterized protein LOC101220...   403   e-110
ref|XP_003609239.1| E3 ubiquitin-protein ligase MARCH3 [Medicago...   402   e-109
ref|NP_001241911.1| uncharacterized protein LOC100818950 [Glycin...   400   e-109
gb|AFK48121.1| unknown [Lotus japonicus]                              399   e-109

>ref|XP_002281763.2| PREDICTED: uncharacterized protein LOC100254401 [Vitis vinifera]
          Length = 304

 Score =  404 bits (1037), Expect = e-110
 Identities = 198/286 (69%), Positives = 219/286 (76%), Gaps = 10/286 (3%)
 Frame = -1

Query: 1218 GEVQLEAPRIEPNPTDTDPLLENQ-------TSVIDDEDVEAGGSAACCRICLENDGE-- 1066
            GEVQLE P  E NP D+DPLLENQ       +S I+ ED+EAG S  CCRICLE DGE  
Sbjct: 3    GEVQLE-PSGERNPRDSDPLLENQADSSTGSSSEINSEDIEAG-SVPCCRICLECDGEPD 60

Query: 1065 -DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWRKMKF 889
             +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQ+HL+    EDNSWRK+KF
Sbjct: 61   DELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQYHLQVALFEDNSWRKIKF 120

Query: 888  RVFVARDVILVFLVVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYYCIXX 709
            R+FVARDV LVFL VQTVI  +GGFAY+MD++G FRNSFSD WDRILS+HPIPFYYCI  
Sbjct: 121  RLFVARDVFLVFLAVQTVIGAMGGFAYIMDKDGAFRNSFSDGWDRILSRHPIPFYYCIGV 180

Query: 708  XXXXXXXXXXXXXLHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXXXXXX 529
                         LHCSS ++NDP +AGC+NCCYGWG+LDCFPASMEAC           
Sbjct: 181  LAFFVLLGFFGLILHCSSLNSNDPHMAGCQNCCYGWGILDCFPASMEACFALVIVFVVIF 240

Query: 528  XXXXXAYGFLAATMVMQRIWQRHYHILTKMELTKEYVVEDLGGCYT 391
                 AYGFLAATM +QRIWQRHYHILTK ELTKEY+VEDL GCYT
Sbjct: 241  AILGVAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLRGCYT 286


>ref|XP_004149889.1| PREDICTED: uncharacterized protein LOC101220313 [Cucumis sativus]
            gi|449533550|ref|XP_004173737.1| PREDICTED:
            uncharacterized LOC101220313 [Cucumis sativus]
          Length = 305

 Score =  403 bits (1036), Expect = e-110
 Identities = 198/287 (68%), Positives = 219/287 (76%), Gaps = 11/287 (3%)
 Frame = -1

Query: 1218 GEVQLEAPRIEPNPTDTDPLLENQ--------TSVIDDEDVEAGGSAACCRICLENDGE- 1066
            GEVQLE+  I  NP+D+DPLLENQ        +  I DED EAG S  CCRICLE+D E 
Sbjct: 3    GEVQLESS-IGQNPSDSDPLLENQNGSSSHGTSDEIKDEDTEAG-SIPCCRICLESDAEP 60

Query: 1065 --DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWRKMK 892
              +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHL+    EDNSWRK+K
Sbjct: 61   EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 891  FRVFVARDVILVFLVVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYYCIX 712
            FR+FVARDV+LVF+ VQT+IA IGG+AY+MD++G FRNSFSD WDRILSKHPIPFYYCI 
Sbjct: 121  FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 711  XXXXXXXXXXXXXXLHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXXXXX 532
                          LHCSS ++NDP +AGC NCCYGWG+LDCFPASMEAC          
Sbjct: 181  VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 531  XXXXXXAYGFLAATMVMQRIWQRHYHILTKMELTKEYVVEDLGGCYT 391
                  AYGFLAATM +QRIWQRHYHILTK ELTKEYVVEDL GCYT
Sbjct: 241  FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYT 287


>ref|XP_003609239.1| E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula]
            gi|355510294|gb|AES91436.1| E3 ubiquitin-protein ligase
            MARCH3 [Medicago truncatula]
          Length = 312

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/292 (66%), Positives = 219/292 (75%), Gaps = 17/292 (5%)
 Frame = -1

Query: 1218 GEVQLEAPRIEPNPTDTDPLLENQTSVIDD--------------EDVEAGGSAACCRICL 1081
            GEVQL+ P I+ NP+D+DPLL +Q  V DD              ED+EAG S  CCRICL
Sbjct: 3    GEVQLQPPPIQQNPSDSDPLLAHQDEVEDDDSHGSGNSNEIKDQEDIEAG-SLPCCRICL 61

Query: 1080 ENDGE---DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDN 910
            E+D +   +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR E  EDN
Sbjct: 62   ESDSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVETYEDN 121

Query: 909  SWRKMKFRVFVARDVILVFLVVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIP 730
            SWRK+KFR+FVARDV LVFL VQTVIA IGGFAY+MD++G+FRNSF D WDRILS+HPIP
Sbjct: 122  SWRKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGNFRNSFDDGWDRILSRHPIP 181

Query: 729  FYYCIXXXXXXXXXXXXXXXLHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXX 550
            FYYCI               LHCSS ++NDP +AGC+NCCYGWG+LDCFPASMEAC    
Sbjct: 182  FYYCIGVVAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASMEACFALV 241

Query: 549  XXXXXXXXXXXXAYGFLAATMVMQRIWQRHYHILTKMELTKEYVVEDLGGCY 394
                        AYGFLA+TM +QRIWQRHYHILTK ELTKEY+VEDL G Y
Sbjct: 242  VVFVVIFAILGVAYGFLASTMAIQRIWQRHYHILTKRELTKEYIVEDLQGSY 293


>ref|NP_001241911.1| uncharacterized protein LOC100818950 [Glycine max]
            gi|255641889|gb|ACU21213.1| unknown [Glycine max]
          Length = 309

 Score =  400 bits (1027), Expect = e-109
 Identities = 193/289 (66%), Positives = 216/289 (74%), Gaps = 14/289 (4%)
 Frame = -1

Query: 1218 GEVQLEAPRIEPNPTDTDPLLENQTSVI-----------DDEDVEAGGSAACCRICLEND 1072
            GEVQL+ P +  NP+D+DPLL NQ               ++EDVEAG    CCRICLE+D
Sbjct: 3    GEVQLQPPAVMQNPSDSDPLLHNQEEEDGSPGSSGEIKNEEEDVEAG-LLPCCRICLESD 61

Query: 1071 GE---DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWR 901
             +   +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR E  EDNSWR
Sbjct: 62   SDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESFEDNSWR 121

Query: 900  KMKFRVFVARDVILVFLVVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYY 721
            K+KFR+FVARDV LVFL VQTVIA IGGF+Y+MD++G FRNSF D WDRILS+HPIPFYY
Sbjct: 122  KIKFRLFVARDVFLVFLAVQTVIAAIGGFSYIMDKDGSFRNSFDDGWDRILSRHPIPFYY 181

Query: 720  CIXXXXXXXXXXXXXXXLHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXX 541
            CI               LHCSS ++NDP +AGC+NCCYGW +LDCFPASMEAC       
Sbjct: 182  CIGVLAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWCLLDCFPASMEACFALVVVF 241

Query: 540  XXXXXXXXXAYGFLAATMVMQRIWQRHYHILTKMELTKEYVVEDLGGCY 394
                     AYGFLAATM +QRIWQRHYHILTK ELTKEY+VEDLGGCY
Sbjct: 242  VVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGGCY 290


>gb|AFK48121.1| unknown [Lotus japonicus]
          Length = 307

 Score =  399 bits (1026), Expect = e-109
 Identities = 193/288 (67%), Positives = 217/288 (75%), Gaps = 12/288 (4%)
 Frame = -1

Query: 1218 GEVQLEAPRIEPNPTDTDPLLENQ---------TSVIDDEDVEAGGSAACCRICLENDGE 1066
            GEVQL+ P I  NP+D+DPLL +            + D+EDVEAG S  CCRICLE+D +
Sbjct: 3    GEVQLQPPPIMQNPSDSDPLLLDHDEDESPLSSAEIKDEEDVEAG-SLPCCRICLESDSD 61

Query: 1065 ---DLISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRAEKIEDNSWRKM 895
               +LISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR E  EDNSWRK+
Sbjct: 62   PEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESYEDNSWRKI 121

Query: 894  KFRVFVARDVILVFLVVQTVIALIGGFAYLMDRNGDFRNSFSDSWDRILSKHPIPFYYCI 715
            KFR+FVARDV LVF+ VQTVIA IGGFAY+MD++G FRNSF D WDRILSKHPIPFYYCI
Sbjct: 122  KFRLFVARDVFLVFVAVQTVIAAIGGFAYIMDKDGTFRNSFDDGWDRILSKHPIPFYYCI 181

Query: 714  XXXXXXXXXXXXXXXLHCSSFSNNDPCLAGCRNCCYGWGVLDCFPASMEACXXXXXXXXX 535
                           LHCSS ++NDP +AGC+NCCYGWG+LDCFPAS+EAC         
Sbjct: 182  GVLAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASVEACFALVVVFVV 241

Query: 534  XXXXXXXAYGFLAATMVMQRIWQRHYHILTKMELTKEYVVEDLGGCYT 391
                   AYGFLA TM +QRIWQR YHILTK ELTKEY+VEDLGGCY+
Sbjct: 242  IFAILGIAYGFLATTMAIQRIWQRLYHILTKRELTKEYIVEDLGGCYS 289


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