BLASTX nr result

ID: Coptis23_contig00012704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012704
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|2...   232   8e-59
ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256...   231   1e-58
gb|ABK23005.1| unknown [Picea sitchensis]                             228   1e-57
gb|ABK21749.1| unknown [Picea sitchensis]                             226   5e-57
gb|AFK41697.1| unknown [Medicago truncatula]                          224   2e-56

>ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|222869756|gb|EEF06887.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  232 bits (591), Expect = 8e-59
 Identities = 110/144 (76%), Positives = 124/144 (86%)
 Frame = +3

Query: 90  MGTSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDS 269
           MG+SGFF+IC+LHSV+ALT G LMMFY NE ++F HGIE A KL GSTPHD LL+QT+DS
Sbjct: 1   MGSSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDS 60

Query: 270 FAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFVRRLEDLARDWPRQ 449
           F+GLLL AIG  LFMV+FVKDREFQSFFAKGCV++HV  A WR YF R+LEDLARD PR 
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMAFWRIYFERKLEDLARDLPRL 120

Query: 450 VVGDILLAVSWVFFLVYSWREKYD 521
           VVGDI LA+SWVFFLVYSWREKYD
Sbjct: 121 VVGDIALALSWVFFLVYSWREKYD 144


>ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera]
           gi|297735997|emb|CBI23971.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  231 bits (589), Expect = 1e-58
 Identities = 111/147 (75%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
 Frame = +3

Query: 84  QTMGTS-GFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQT 260
           Q+MG+S GFF+ICLLHS+IALT G LMMFY+ E+  F HG ETA KLLGSTPHD LLI+T
Sbjct: 4   QSMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRT 63

Query: 261 TDSFAGLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFVRRLEDLARDW 440
           +DSF+GLLL AIG  LFMV+FV+DR+FQSFFAKGC+V+HV  A+WRFYF RR+EDLA DW
Sbjct: 64  SDSFSGLLLFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDW 123

Query: 441 PRQVVGDILLAVSWVFFLVYSWREKYD 521
            RQ+VGDILLA+SWVFFLVYSWREKYD
Sbjct: 124 LRQIVGDILLALSWVFFLVYSWREKYD 150


>gb|ABK23005.1| unknown [Picea sitchensis]
          Length = 143

 Score =  228 bits (581), Expect = 1e-57
 Identities = 103/139 (74%), Positives = 124/139 (89%)
 Frame = +3

Query: 105 FFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFAGLL 284
           F ++CLLHSV A+ SG LMMF+  EVSIF HG ETANKLLGSTPHD LLIQT+DS AG+L
Sbjct: 5   FSLVCLLHSVTAVVSGCLMMFFWREVSIFGHGKETANKLLGSTPHDQLLIQTSDSLAGML 64

Query: 285 LCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFVRRLEDLARDWPRQVVGDI 464
           L ++G+ LFMVSFV+DREFQSFFAKGC+V+H + A+WRFYF RR+EDLARDWPRQ+VGDI
Sbjct: 65  LFSVGIMLFMVSFVRDREFQSFFAKGCIVLHTLMALWRFYFARRVEDLARDWPRQLVGDI 124

Query: 465 LLAVSWVFFLVYSWREKYD 521
           ++++SWVFFLVY+WREKYD
Sbjct: 125 IMSLSWVFFLVYNWREKYD 143


>gb|ABK21749.1| unknown [Picea sitchensis]
          Length = 143

 Score =  226 bits (576), Expect = 5e-57
 Identities = 102/139 (73%), Positives = 124/139 (89%)
 Frame = +3

Query: 105 FFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFAGLL 284
           F ++CLLHSV A+ SG LMMF+  EVSIF HG ETA+KLLGSTPHD LLIQT+DS AG+L
Sbjct: 5   FSLVCLLHSVTAVVSGCLMMFFWREVSIFGHGKETASKLLGSTPHDQLLIQTSDSLAGML 64

Query: 285 LCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFVRRLEDLARDWPRQVVGDI 464
           L ++G+ LFMVSFV+DREFQSFFAKGC+V+H + A+WRFYF RR+EDLARDWPRQ+VGDI
Sbjct: 65  LFSVGIMLFMVSFVRDREFQSFFAKGCIVLHTLMALWRFYFARRVEDLARDWPRQLVGDI 124

Query: 465 LLAVSWVFFLVYSWREKYD 521
           ++++SWVFFLVY+WREKYD
Sbjct: 125 IMSLSWVFFLVYNWREKYD 143


>gb|AFK41697.1| unknown [Medicago truncatula]
          Length = 145

 Score =  224 bits (570), Expect = 2e-56
 Identities = 103/142 (72%), Positives = 122/142 (85%)
 Frame = +3

Query: 96  TSGFFIICLLHSVIALTSGVLMMFYVNEVSIFTHGIETANKLLGSTPHDTLLIQTTDSFA 275
           +S FF+IC+LHS+IA+TSG LMMFY+ EV  F HG++TA KLLGSTPHD LLI+T+DSF+
Sbjct: 4   SSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSDSFS 63

Query: 276 GLLLCAIGVFLFMVSFVKDREFQSFFAKGCVVIHVMAAVWRFYFVRRLEDLARDWPRQVV 455
           GLLL AIG  LFMVSFVKDR+FQ FFAKGC ++HV  A+WR YF R++EDLA DW RQ V
Sbjct: 64  GLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLRQTV 123

Query: 456 GDILLAVSWVFFLVYSWREKYD 521
           GD+LLA+SWVFFLVYSWREKYD
Sbjct: 124 GDVLLALSWVFFLVYSWREKYD 145


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