BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012632
         (1835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   207   1e-50
emb|CBI19420.3| unnamed protein product [Vitis vinifera]              206   2e-50
ref|XP_002520510.1| transcription initiation factor, putative [R...   204   5e-50
ref|XP_002302415.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-46
ref|XP_002510115.1| transcription initiation factor, putative [R...   192   2e-46

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  207 bits (526), Expect = 1e-50
 Identities = 141/346 (40%), Positives = 196/346 (56%), Gaps = 31/346 (8%)
 Frame = -3

Query: 1326 KRPSSEKELLLEALDNHSLQLSCKKQKVPVTIHEQGIKEDSNNITALGGASIREEDEQLL 1147
            K+PS  ++  LEAL + S  L  KKQKV     +Q I E  N++TA+ G ++REE+EQL 
Sbjct: 578  KKPSIGQKKPLEALGS-SPPLPSKKQKVSGAFLDQSI-EQLNDVTAVSGVNLREEEEQLF 635

Query: 1146 LGHMEESQISQEAQTVV-EEEERLILQRIPLQRKLAEIISKYGITCISNNVEQCLSMCVK 970
             G  E+S++S+ ++ VV EEEERLILQ+ PLQ+KLAEI+++  +  ISN+VE+CLS+CV+
Sbjct: 636  SGPKEDSRVSEASRRVVQEEEERLILQKAPLQKKLAEIMARCSLKNISNDVERCLSLCVE 695

Query: 969  ERVLGMISDLTKLSKLRVDRDKAVQQTSMTSDAQLETLMMDCKAKELSEKCQAEEDVMPQ 790
            ER+ G IS+L +LSK R D +K   ++ +TSD + + L+M+ KA+E  EK QAE + + +
Sbjct: 696  ERLRGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKAREEWEKKQAEAEKLRK 755

Query: 789  KHNKADKVGVDN----------------------LXXXXXXXXXXXXXXVDILLKWQLMA 676
             +      GVD                                       D+L KWQLMA
Sbjct: 756  LNEPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMA 815

Query: 675  EQARQKREGRTCAVRGAQLGSDA---ILPTSKQPAWXXXXXXXXXXXXXXXXXXXXSKS- 508
            EQARQKREG   A  G+Q G DA   +  TS + A                      ++ 
Sbjct: 816  EQARQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVSCGVRKFGRNN 875

Query: 507  ----QTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTDAGT 382
                QT+  R I V+DV++VLEREPQM +STLIYRLYE M + A T
Sbjct: 876  AIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAAT 921



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
 Frame = -3

Query: 1737 PSQTKQLHDVRQQTQAEQNPLVAEQNPSPRFGQGS---------MKHPDDQYQNP-LPKR 1588
            P Q KQ  D  QQ Q+E NP+   Q P  +  + +         + +PD Q+Q P L K 
Sbjct: 120  PLQQKQSQDDPQQLQSEPNPIQFSQAPGIQISEKNSVQIPEPDRIHNPDKQHQFPELQKI 179

Query: 1587 NDELR-RTEQPSSGAISITGVPLNILIPAIVPYLDKSKVAQLQWHFTKLRRNEINVEDFI 1411
            N++    TEQ S+       +P  +L+P+I+P+LDK +  QL+  + KL++NEI    F+
Sbjct: 180  NNQQGIATEQASNSGNQNKHIPFGMLLPSIIPHLDKDRALQLRTLYAKLKKNEIPKLAFV 239

Query: 1410 RSTRKIAGSQLLRQALDDTQIQIHSSILKRPSSEKELLLEALDNHSLQLSCKKQKVPVTI 1231
            R  R I G Q+L+ A+D    Q   S  +  S        AL  H L+       +P + 
Sbjct: 240  RLMRGIVGDQMLKLAVDAWNYQTGPSQFQLQSQ-----ASALQQH-LKTPSNSSHMPSSA 293

Query: 1230 HEQGIKEDSN-NITALGGASIREEDEQLLLGHMEESQISQEAQTVVEEE 1087
             +  ++ DS+   T       RE + Q     M+ SQ+S  + +  ++E
Sbjct: 294  MK--VQTDSSYPTTETNSQKPREMERQSDSHGMQGSQMSSSSLSSAKQE 340


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  206 bits (524), Expect = 2e-50
 Identities = 142/349 (40%), Positives = 195/349 (55%), Gaps = 34/349 (9%)
 Frame = -3

Query: 1326 KRPSSEKELLLEALDNHSLQLSCKKQKVPVTIHEQGIKEDSNNITALGGASIREEDEQLL 1147
            K+PS  ++  LEAL + S  L  KKQKV     +Q I E  N++TA+ G ++REE+EQL 
Sbjct: 535  KKPSIGQKKPLEALGS-SPPLPSKKQKVSGAFLDQSI-EQLNDVTAVSGVNLREEEEQLF 592

Query: 1146 LGHMEESQISQEAQTVV-EEEERLILQRIPLQRKLAEIISKYGITCISNNVEQCLSMCVK 970
             G  E+S++S+ ++ VV EEEERLILQ+ PLQ+KLAEI+++  +  ISN+VE+CLS+CV+
Sbjct: 593  SGPKEDSRVSEASRRVVQEEEERLILQKAPLQKKLAEIMARCSLKNISNDVERCLSLCVE 652

Query: 969  ERVLGMISDLTKLSKLRVDRDKAVQQTSMTSDAQLETLMMDCKAKELSEKCQAEEDVMPQ 790
            ER+ G IS+L +LSK R D +K   ++ +TSD + + L+M+ KA+E  EK QAE + + +
Sbjct: 653  ERLRGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKAREEWEKKQAEAEKLRK 712

Query: 789  KHNKADKVGVDN----------------------LXXXXXXXXXXXXXXVDILLKWQLMA 676
             +      GVD                                       D+L KWQLMA
Sbjct: 713  LNEPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMA 772

Query: 675  EQARQKREGRTCAVRGAQLGSDA---ILPTSKQPAWXXXXXXXXXXXXXXXXXXXXSK-- 511
            EQARQKREG   A  G+Q G DA   +  TS + A                      K  
Sbjct: 773  EQARQKREGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFG 832

Query: 510  ------SQTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTDAGT 382
                   QT+  R I V+DV++VLEREPQM +STLIYRLYE M + A T
Sbjct: 833  RNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAAT 881



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 32/249 (12%)
 Frame = -3

Query: 1737 PSQTKQLHDVRQQTQAEQNPLVAEQNPSPRFGQGS---------MKHPDDQYQNP-LPKR 1588
            P Q KQ  D  QQ Q+E NP+   Q P  +  + +         + +PD Q+Q P L K 
Sbjct: 120  PLQQKQSQDDPQQLQSEPNPIQFSQAPGIQISEKNSVQIPEPDRIHNPDKQHQFPELQKI 179

Query: 1587 NDELR-RTEQPSSGAISITGVPLNILIPAIVPYLDKSKVAQLQWHFTKLRRNEINVEDFI 1411
            N++    TEQ S+       +P  +L+P+I+P+LDK +  QL+  + KL++NEI    F+
Sbjct: 180  NNQQGIATEQASNSGNQNKHIPFGMLLPSIIPHLDKDRALQLRTLYAKLKKNEIPKLAFV 239

Query: 1410 RSTRKIAGSQLLRQAL--------DDTQIQIHSSI------LKRPSSEKELLLEALDNHS 1273
            R  R I G Q+L+ A+          +Q Q+ S        LK PSS   +  +  D HS
Sbjct: 240  RLMRGIVGDQMLKLAVMKLQQSPTGPSQFQLQSQASALQQHLKTPSS---IGSQFSDPHS 296

Query: 1272 L-QLSCKKQKVPVT---IHEQGIK---EDSNNITALGGASIREEDEQLLLGHMEESQISQ 1114
              QL  K Q  P     +    +K   + S   T       RE + Q     M+ SQ+S 
Sbjct: 297  FSQLHQKGQSTPADSSHMPSSAMKVQTDSSYPTTETNSQKPREMERQSDSHGMQGSQMSS 356

Query: 1113 EAQTVVEEE 1087
             + +  ++E
Sbjct: 357  SSLSSAKQE 365


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
            gi|223540352|gb|EEF41923.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 927

 Score =  204 bits (520), Expect = 5e-50
 Identities = 135/338 (39%), Positives = 195/338 (57%), Gaps = 25/338 (7%)
 Frame = -3

Query: 1326 KRPSSEKELLLEALDNHSLQLSCKKQKVPVTIHEQGIKEDSNNITALGGASIREEDEQLL 1147
            K+P   ++  LEAL + S  +S KKQK+ V   +Q I E  N++TA+ G ++REE+EQL 
Sbjct: 544  KKPLIGQKKPLEALGS-SPPMSSKKQKISVASSDQSI-EQLNDVTAVSGVNLREEEEQLF 601

Query: 1146 LGHMEESQISQEAQTVV-EEEERLILQRIPLQRKLAEIISKYGITCISNNVEQCLSMCVK 970
             G  E+S++S+ ++ VV EEEERLILQ+ PLQ+K+AEI++K G+  I+++VE+CLS+CV+
Sbjct: 602  SGSKEDSRVSEASRRVVQEEEERLILQKTPLQKKVAEIMAKCGLKYINSDVERCLSLCVE 661

Query: 969  ERVLGMISDLTKLSKLRVDRDKAVQQTSMTSDAQLETLMMDCKAKELSEKCQAEEDVMPQ 790
            ER+ G++S L +LSK R+D +K   +T ++SD + + + M+ KAKE  +K QAE +++ +
Sbjct: 662  ERMRGLVSTLIRLSKQRIDAEKPKHRTVISSDVRQQIMTMNRKAKEEWDKKQAESEMLQK 721

Query: 789  ---------------KHNKADKVGVDNL-XXXXXXXXXXXXXXVDILLKWQLMAEQARQK 658
                           K  KA K   D +                D+L KWQLM EQARQK
Sbjct: 722  VNEVEGDKEKDEGRAKPVKASKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMVEQARQK 781

Query: 657  REGRTCAVRGAQLGSDAI---LPTSKQPAWXXXXXXXXXXXXXXXXXXXXSKS-----QT 502
            RE    A  G Q   D     L TS +                        ++     QT
Sbjct: 782  REAGPEAASGIQSAKDVFGKPLLTSGKAVKDGQEPEKRSAAVTSTGARRFGRNQSVAPQT 841

Query: 501  KPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTDA 388
            +P R I V+DV+  LEREPQM++STLIYRLYE M +DA
Sbjct: 842  RPARSISVKDVIAALEREPQMSKSTLIYRLYERMQSDA 879


>ref|XP_002302415.1| predicted protein [Populus trichocarpa] gi|222844141|gb|EEE81688.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  193 bits (490), Expect = 1e-46
 Identities = 141/350 (40%), Positives = 193/350 (55%), Gaps = 37/350 (10%)
 Frame = -3

Query: 1326 KRPSSEKELLLEALDNHSLQLSCKKQKVPVTIHEQGIKEDSNNITALGGASIREEDEQLL 1147
            K+ S  ++   EAL +  L  S KKQKV     +Q I E  N++TA+ G ++REE+EQL 
Sbjct: 33   KKHSVGQKKPFEALGSSPLA-SSKKQKVSGAFSDQSI-EQLNDVTAVSGVNLREEEEQLF 90

Query: 1146 LGHMEESQISQEAQTVV-EEEERLILQRIPLQRKLAEIISKYGITCISNNVEQCLSMCVK 970
             G  E+S++S+ ++ VV EEEERLILQ+ PLQ+KL EI++K G+  I N+V +CLS+CV+
Sbjct: 91   SGTKEDSRVSEASRRVVQEEEERLILQKKPLQKKLGEIMAKCGLKNIGNDVGRCLSLCVE 150

Query: 969  ERVLGMISDLTKLSKLRVDRDKAVQQTSMTSDAQLETLMMDCKAKELSEKCQAEEDVM-- 796
            ER+ G+ISDL +LSK RVD +K   QT +TSD + + + M+ KA+E  EK QAE + +  
Sbjct: 151  ERMRGLISDLIRLSKQRVDAEKPRHQTLITSDVRQQIMTMNRKAREEWEKRQAEAEKLQK 210

Query: 795  ---PQKHN----------------KADKVGVDNL-XXXXXXXXXXXXXXVDILLKWQLMA 676
               P+  N                KA+K   D +                D+L KWQLMA
Sbjct: 211  VNDPEGENGGEGDKEKDEGRVKSVKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMA 270

Query: 675  EQARQKREGRTCAVRGAQLGSDAILPTSKQPAWXXXXXXXXXXXXXXXXXXXXSKS---- 508
            EQARQKRE     + GA   S  +   ++ P                      S S    
Sbjct: 271  EQARQKRE---VGMEGAS-SSQPVNDVNRNPQSPSGRNVKENLEAEKRSPAVPSASGAVR 326

Query: 507  ----------QTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTDA 388
                      QTK VR I V+DV+ VLEREPQM+RSTLIY+LYE + +DA
Sbjct: 327  KFGRNQAIVPQTKVVRTITVKDVMAVLEREPQMSRSTLIYQLYERIRSDA 376


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score =  192 bits (489), Expect = 2e-46
 Identities = 135/352 (38%), Positives = 192/352 (54%), Gaps = 37/352 (10%)
 Frame = -3

Query: 1326 KRPSSEKELLLEALDNHSLQLSCKKQKVPVTIHEQGIKEDSNNITALGGASIREEDEQLL 1147
            K+ S  ++  LEAL + S  +S KKQKV     +Q I E  N++TA+ G ++REE+EQL 
Sbjct: 577  KKLSIGQKKPLEALGS-SPPMSSKKQKVSGAFLDQSI-EQLNDVTAVSGVNLREEEEQLF 634

Query: 1146 LGHMEESQISQEAQTVV-EEEERLILQRIPLQRKLAEIISKYGITCISNNVEQCLSMCVK 970
             G  E+S++S+ ++ VV EEEERLILQ+ PLQ+KLAEI+ K G+  I+N+VE+CLS+CV+
Sbjct: 635  SGSKEDSRVSEASRRVVQEEEERLILQKTPLQKKLAEIMVKCGLKNINNDVERCLSLCVE 694

Query: 969  ERVLGMISDLTKLSKLRVDRDKAVQQTSMTSDAQLETLMMDCKAKELSEKCQAEEDVMPQ 790
            ER+ G+IS L +LSK RVD +K+  +T +TSD + + + M+ KA+E  E+ QAE + + +
Sbjct: 695  ERMRGLISTLIRLSKQRVDAEKSRHRTVITSDVRQQIMTMNQKAREEWERKQAEAEKLRK 754

Query: 789  KHNKADKVGVDN--------------------------LXXXXXXXXXXXXXXVDILLKW 688
             +      GV+                                           D L KW
Sbjct: 755  VNEPEGDNGVEGDKEKDDGRVKAIKGNIPANKEEDDKMRTTAANVAARAAVGGDDHLSKW 814

Query: 687  QLMAEQARQKREGRTCAVRGA----------QLGSDAILPTSKQPAWXXXXXXXXXXXXX 538
            QLMAEQARQKREG   A  G+          Q  S   +  +++P               
Sbjct: 815  QLMAEQARQKREGGIEAASGSYSAKEVTRKPQFTSGKSMKDNQEP--EKRSPAAASTGVR 872

Query: 537  XXXXXXXSKSQTKPVRRIFVRDVVTVLEREPQMARSTLIYRLYEGMHTDAGT 382
                      Q+K  R I V+DV+  LEREPQM++STLIYRLYE + +DA T
Sbjct: 873  KVGRNQAFTPQSKVARSISVKDVIAALEREPQMSKSTLIYRLYERVQSDAPT 924



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
 Frame = -3

Query: 1779 ELMQNTSTEMEHQKPSQTKQLHDVRQQTQAEQNPL---------VAEQNPSPRFGQGSMK 1627
            +L  +   E  H  P   KQ  D  QQ+QAEQ P+         ++E N  P+     M+
Sbjct: 108  QLKNDVKQESSHL-PLHQKQPQDTVQQSQAEQAPVQTPRTIRTQISETNTMPKSEPDKMQ 166

Query: 1626 HPD--DQYQNPLPKRNDELRRTEQPSSGAISITGVPLNILIPAIVPYLDKSKVAQLQWHF 1453
             PD   QY N     N +    EQPS+       +P  +L+P + P+LDK +  QL+  F
Sbjct: 167  IPDTESQYMNVQNMGNQQTMGPEQPSNPKNQFKPIPFMLLLPTLKPHLDKDRDMQLEILF 226

Query: 1452 TKLRRNEINVEDFIRSTRKIAGSQLLRQALDDTQIQ 1345
             KLRRN++  E F+R  R I G Q+LR A++  Q Q
Sbjct: 227  NKLRRNQVPKEQFVRLMRGIVGDQVLRLAVEQWQSQ 262