BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012614
         (1541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   179   1e-42
ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cuc...   139   2e-30
ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219...   139   2e-30
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   106   2e-20
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   106   2e-20

>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score =  179 bits (455), Expect = 1e-42
 Identities = 122/325 (37%), Positives = 147/325 (45%), Gaps = 13/325 (4%)
 Frame = +2

Query: 80   VGQTTYWCHECDMSFSLVITTQSNPELTCPHCHGDFLEEMDSPLXXXXXXXXXXXXXXXX 259
            + + TYWCHECDMS +L  ++ S+P L CPHCH DFLEEMDSP                 
Sbjct: 18   IDRRTYWCHECDMSVTLSPSSSSSPTLLCPHCHSDFLEEMDSPNPNPNPNPTAPNFSFHS 77

Query: 260  XXXXXXXXXXILSQXXXXXXXXXXXXRLSNAYLLDRLIQHLTDP-XXXXXXXXXXXMPGG 436
                                       L ++  L RLI HLT P            +P  
Sbjct: 78   ENF------------------------LLDSPYLHRLIHHLTHPSDTNNDGNDSSDLPPP 113

Query: 437  TXXXXXXXXXXXXXXXTI---KITSSFLGCDSVL-CAVCKDEFFIGVEAKQLPCNHIYHC 604
                             +   KIT SFL  D +L CAVCKD+F + VEAK+LPCNHIYH 
Sbjct: 114  RYLNPNSVAASRASLEALPTFKITPSFLQLDPILFCAVCKDQFVVDVEAKRLPCNHIYHS 173

Query: 605  DCILPWLSQHNSCPVCRFLLPTDENENRRRSMGMGRVPVRFGNLMXXXXXXXXXFGVGTT 784
            DCILPWLSQ NSCP+CRF LPTDE E+         V + FG+LM         FG+G+T
Sbjct: 174  DCILPWLSQQNSCPLCRFRLPTDEGED--SGDAGATVTMTFGDLM----EDHELFGLGST 227

Query: 785  LRHIVRSHRFVFTPRPAGNFGSSSSPTQIAQAETSSAGPANSGETXXXXXXXXXXXXXXX 964
            LRHI R +R VF          + S    AQA+  S GP NS ET               
Sbjct: 228  LRHIARRNRLVF---------PALSAEGQAQAQGESLGPDNSVETVSSWPRQVLVGGGGG 278

Query: 965  XXXXXD--------EDGDTVMSEIR 1015
                 D        ED D +M E+R
Sbjct: 279  GGGDADFGAGAVANEDADAMMPEVR 303


>ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
          Length = 333

 Score =  139 bits (351), Expect = 2e-30
 Identities = 97/286 (33%), Positives = 127/286 (44%), Gaps = 10/286 (3%)
 Frame = +2

Query: 92  TYWCHECDMSFSLVI---------TTQSNPELTCPHCHGDFLEEMDSPLXXXXXXXXXXX 244
           TYWCHECDMS +LV          ++ S+  L CPHC  DF+E MD  +           
Sbjct: 16  TYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSSSSISDNP 75

Query: 245 XXXXXXXXXXXXXXXILSQXXXXXXXXXXXXRLSNAYLLDRLIQHLTDPXXXXXXXXXXX 424
                           +               L N+    RL QHL D            
Sbjct: 76  NSSSPPTDSDPSSFVFVDPLPITSDDNY----LLNSPQFLRLFQHLADSSESDF------ 125

Query: 425 MPGGTXXXXXXXXXXXXXXXTIKITSSFLGCDSVL-CAVCKDEFFIGVEAKQLPCNHIYH 601
           +P                  TIK+TS+ L  D VL CA+CKD+F + VEAKQLPC+H+YH
Sbjct: 126 VPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLYH 185

Query: 602 CDCILPWLSQHNSCPVCRFLLPTDENENRRRSMGMGRVPVRFGNLMXXXXXXXXXFGVGT 781
            DCILPWLS H+SCP+CRF LP+D+  +R R      +  R  +LM         +G+ T
Sbjct: 186 PDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRAR--DLM----HQEDSYGLRT 239

Query: 782 TLRHIVRSHRFVFTPRPAGNFGSSSSPTQIAQAETSSAGPANSGET 919
           TL  + R H  + +     +  S  SPTQ   A   S    +S ET
Sbjct: 240 TLELMARRHSSISS--EGIHVDSFQSPTQFGVAMMESGEQTDSVET 283


>ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219937 [Cucumis sativus]
          Length = 334

 Score =  139 bits (350), Expect = 2e-30
 Identities = 97/287 (33%), Positives = 127/287 (44%), Gaps = 11/287 (3%)
 Frame = +2

Query: 92  TYWCHECDMSFSLVI----------TTQSNPELTCPHCHGDFLEEMDSPLXXXXXXXXXX 241
           TYWCHECDMS +LV           ++ S+  L CPHC  DF+E MD  +          
Sbjct: 16  TYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSSSSISDN 75

Query: 242 XXXXXXXXXXXXXXXXILSQXXXXXXXXXXXXRLSNAYLLDRLIQHLTDPXXXXXXXXXX 421
                            +               L N+    RL QHL D           
Sbjct: 76  PNSSSPPTDSDPSSFVFVDPLPITSDDNY----LLNSPQFLRLFQHLADSSESDF----- 126

Query: 422 XMPGGTXXXXXXXXXXXXXXXTIKITSSFLGCDSVL-CAVCKDEFFIGVEAKQLPCNHIY 598
            +P                  TIK+TS+ L  D VL CA+CKD+F + VEAKQLPC+H+Y
Sbjct: 127 -VPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCSHLY 185

Query: 599 HCDCILPWLSQHNSCPVCRFLLPTDENENRRRSMGMGRVPVRFGNLMXXXXXXXXXFGVG 778
           H DCILPWLS H+SCP+CRF LP+D+  +R R      +  R  +LM         +G+ 
Sbjct: 186 HPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCRTSALLRAR--DLM----HQEDSYGLR 239

Query: 779 TTLRHIVRSHRFVFTPRPAGNFGSSSSPTQIAQAETSSAGPANSGET 919
           TTL  + R H  + +     +  S  SPTQ   A   S    +S ET
Sbjct: 240 TTLELMARRHSSISS--EGIHVDSFQSPTQFGVAMMESGEQTDSVET 284


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score =  106 bits (264), Expect = 2e-20
 Identities = 50/83 (60%), Positives = 58/83 (69%)
 Frame = +2

Query: 485 TIKITSSFLGCDSVLCAVCKDEFFIGVEAKQLPCNHIYHCDCILPWLSQHNSCPVCRFLL 664
           TI+IT   LG DS  CAVCKD F +  EAKQ+PC HIYH DCILPWL  HNSCPVCR+ L
Sbjct: 202 TIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYEL 261

Query: 665 PTDENENRRRSMGMGRVPVRFGN 733
           PTD+ +   R+ G G+V    GN
Sbjct: 262 PTDDPDYEHRTRG-GQVNQTGGN 283


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  106 bits (264), Expect = 2e-20
 Identities = 50/83 (60%), Positives = 58/83 (69%)
 Frame = +2

Query: 485 TIKITSSFLGCDSVLCAVCKDEFFIGVEAKQLPCNHIYHCDCILPWLSQHNSCPVCRFLL 664
           TI+IT   LG DS  CAVCKD F +  EAKQ+PC HIYH DCILPWL  HNSCPVCR+ L
Sbjct: 204 TIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYEL 263

Query: 665 PTDENENRRRSMGMGRVPVRFGN 733
           PTD+ +   R+ G G+V    GN
Sbjct: 264 PTDDPDYEHRTRG-GQVNQTGGN 285