BLASTX nr result

ID: Coptis23_contig00012604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012604
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]...   286   4e-75
ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera] gi|2...   283   4e-74
emb|CAN62995.1| hypothetical protein VITISV_021620 [Vitis vinifera]   283   4e-74
ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223...   276   3e-72
ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|...   272   5e-71

>ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]
           gi|296089745|emb|CBI39564.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score =  286 bits (732), Expect = 4e-75
 Identities = 145/167 (86%), Positives = 157/167 (94%)
 Frame = -2

Query: 802 PSEDSNVRKNVQRSLATDLQNLSVDLRKKQSMYLKCLRQQKEGQDGVDLEMNLNENRSQL 623
           PSEDSNVRKNVQRSLATDLQNLS++LRKKQS YLK LRQQKEGQDGVDLEMNLN N+S  
Sbjct: 150 PSEDSNVRKNVQRSLATDLQNLSMELRKKQSSYLKRLRQQKEGQDGVDLEMNLNGNKSLR 209

Query: 622 EVDDFSDLGFNEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIV 443
           E D+FSDLGFNEHQM+KLKK+EAFT ERE+EI QVVESVNELAQIMKDLSVLVIDQGTIV
Sbjct: 210 EDDEFSDLGFNEHQMTKLKKNEAFTAEREREIQQVVESVNELAQIMKDLSVLVIDQGTIV 269

Query: 442 DRIDYNVQNVATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 302
           DRIDYN+QNVA SVE+GFKQL+KAERTQ+KGGMV CAT+LVIMCFVM
Sbjct: 270 DRIDYNIQNVAASVEEGFKQLQKAERTQKKGGMVMCATVLVIMCFVM 316


>ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera]
           gi|297743940|emb|CBI36910.3| unnamed protein product
           [Vitis vinifera]
          Length = 318

 Score =  283 bits (723), Expect = 4e-74
 Identities = 142/167 (85%), Positives = 156/167 (93%)
 Frame = -2

Query: 802 PSEDSNVRKNVQRSLATDLQNLSVDLRKKQSMYLKCLRQQKEGQDGVDLEMNLNENRSQL 623
           PSEDSNVRKNVQRSLATDLQNLS++LRK+QS YLK LRQQKEG DGVDLEMNLNEN+ +L
Sbjct: 141 PSEDSNVRKNVQRSLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENKFRL 200

Query: 622 EVDDFSDLGFNEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIV 443
           + D+F D+GFNEHQM+KLKKSE FT EREKEI QVVESVNELAQIMKDLSVLVIDQGTIV
Sbjct: 201 DDDEFGDMGFNEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTIV 260

Query: 442 DRIDYNVQNVATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 302
           DRIDYN+Q+V+ SVE+GFKQLEKAERTQRKGGMV CATILVIMCF+M
Sbjct: 261 DRIDYNIQSVSASVEEGFKQLEKAERTQRKGGMVTCATILVIMCFIM 307


>emb|CAN62995.1| hypothetical protein VITISV_021620 [Vitis vinifera]
          Length = 318

 Score =  283 bits (723), Expect = 4e-74
 Identities = 142/167 (85%), Positives = 156/167 (93%)
 Frame = -2

Query: 802 PSEDSNVRKNVQRSLATDLQNLSVDLRKKQSMYLKCLRQQKEGQDGVDLEMNLNENRSQL 623
           PSEDSNVRKNVQRSLATDLQNLS++LRK+QS YLK LRQQKEG DGVDLEMNLNEN+ +L
Sbjct: 141 PSEDSNVRKNVQRSLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENKFRL 200

Query: 622 EVDDFSDLGFNEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIV 443
           + D+F D+GFNEHQM+KLKKSE FT EREKEI QVVESVNELAQIMKDLSVLVIDQGTIV
Sbjct: 201 DDDEFGDMGFNEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTIV 260

Query: 442 DRIDYNVQNVATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 302
           DRIDYN+Q+V+ SVE+GFKQLEKAERTQRKGGMV CATILVIMCF+M
Sbjct: 261 DRIDYNIQSVSASVEEGFKQLEKAERTQRKGGMVTCATILVIMCFIM 307


>ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223548442|gb|EEF49933.1|
           syntaxin, putative [Ricinus communis]
          Length = 323

 Score =  276 bits (707), Expect = 3e-72
 Identities = 138/167 (82%), Positives = 157/167 (94%)
 Frame = -2

Query: 802 PSEDSNVRKNVQRSLATDLQNLSVDLRKKQSMYLKCLRQQKEGQDGVDLEMNLNENRSQL 623
           PSEDSNVRKNVQRSLATDLQNLS++LRKKQS YLK LRQQKEGQDGVDLEMNLN ++S++
Sbjct: 146 PSEDSNVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGVDLEMNLNGSKSRI 205

Query: 622 EVDDFSDLGFNEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIV 443
           + DD  D+ F+EHQM+KLKKSEAFTVERE+EI QVVESVNELAQIMKDLSVLVIDQGTIV
Sbjct: 206 DDDDLDDMVFSEHQMAKLKKSEAFTVEREREIQQVVESVNELAQIMKDLSVLVIDQGTIV 265

Query: 442 DRIDYNVQNVATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 302
           DRIDYN+QNVAT+VE+G KQL+KAERTQ++GGMV CAT+LVIMCF+M
Sbjct: 266 DRIDYNIQNVATTVEEGLKQLQKAERTQKQGGMVMCATVLVIMCFIM 312


>ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|gb|AES61446.1| Syntaxin
           [Medicago truncatula]
          Length = 376

 Score =  272 bits (696), Expect = 5e-71
 Identities = 138/167 (82%), Positives = 154/167 (92%)
 Frame = -2

Query: 802 PSEDSNVRKNVQRSLATDLQNLSVDLRKKQSMYLKCLRQQKEGQDGVDLEMNLNENRSQL 623
           PSEDSNVRKNVQRSLATDLQ+LSVDLRKKQS YLK LRQQKEG DGVDLE+N+N ++S+ 
Sbjct: 148 PSEDSNVRKNVQRSLATDLQSLSVDLRKKQSTYLKRLRQQKEGHDGVDLEINMNGSKSKY 207

Query: 622 EVDDFSDLGFNEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIV 443
           E DD  ++ FNEHQM+KLKKSEAFTVEREKEI QVVESVNELAQIMKDLSVLVIDQGTIV
Sbjct: 208 EDDDLDNMIFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIV 267

Query: 442 DRIDYNVQNVATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 302
           DRIDYN+QNVAT+VE G KQL+KAERTQ+KGGMV CA++L+IMCFVM
Sbjct: 268 DRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCASVLLIMCFVM 314


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