BLASTX nr result

ID: Coptis23_contig00012578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012578
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528353.1| conserved hypothetical protein [Ricinus comm...   114   5e-23
emb|CBI37182.3| unnamed protein product [Vitis vinifera]               94   6e-17
ref|XP_002272833.1| PREDICTED: uncharacterized protein LOC100246...    94   6e-17
ref|XP_004134039.1| PREDICTED: uncharacterized protein LOC101203...    88   4e-15
ref|XP_003556341.1| PREDICTED: uncharacterized protein LOC100784...    78   4e-12

>ref|XP_002528353.1| conserved hypothetical protein [Ricinus communis]
           gi|223532221|gb|EEF34025.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score =  114 bits (284), Expect = 5e-23
 Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
 Frame = -1

Query: 872 MYPRVKVRQVEEPEKDDEYVVQADR-PALLCLKDFNSPTLQDNRVSRDKEYISGSPPSIA 696
           MYP+VKVR   +   DD YV +     +LL LKD     LQD+     KEY   SP  IA
Sbjct: 18  MYPKVKVRTEGQ---DDLYVAREHNWTSLLSLKDIQFLLLQDSCFPV-KEYRDVSPVPIA 73

Query: 695 RIPKSYIPSFTLPAISSSKGENNKET--EDIRQNIRASSIPPPRAVLSSPDNDGIIGNRN 522
           +IPK+Y+P+  LP  S+S+G +NK +  E+ R NIRAS +P PRAV+SSPDND +I N+N
Sbjct: 74  KIPKTYVPNILLPTESASEGVDNKSSSDEEDRPNIRASLVPRPRAVISSPDNDALIANKN 133

Query: 521 QASGERNSIMKKSNLGAHTASQGKVNTRSVTAKFPVHMRRLCRETSSKKSDLKGKENPEL 342
           +    + S +K  NL     +Q KV       + P++  +  ++T+ KK D++G +    
Sbjct: 134 RVKATQPSALKNHNLIRSRHAQCKVVPSQAIDESPLNTSK-SKDTTDKKIDVRGTKGSAT 192

Query: 341 TVPKQSPYLRKGKQRS 294
            +  Q   +   K  S
Sbjct: 193 VLSSQRRNITSAKPSS 208


>emb|CBI37182.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 74/196 (37%), Positives = 101/196 (51%), Gaps = 8/196 (4%)
 Frame = -1

Query: 872 MYPRVKVRQVEEPEKDDEYVVQADRPAL-LCLKDFNSPTLQDNRVSRDKEYISGSPPSIA 696
           MYPR K  +V E E+D    +Q + P++ + L +        N     KE  S  PPS A
Sbjct: 33  MYPRAK--KVREQEQDSHISLQNESPSMPMVLLEVLESLSSHNSHPHVKEKRSNGPPSAA 90

Query: 695 RIPKSYIPSFT------LPAISSSKGENNKET-EDIRQNIRASSIPPPRAVLSSPDNDGI 537
           +IPKS + +        +P  S   G+N+K T ED +Q+ RA S+P PRAVLSSPDNDG+
Sbjct: 91  KIPKSCVKNLAAVRSPPIPVSSKGIGKNDKHTGEDEKQSGRACSVPRPRAVLSSPDNDGM 150

Query: 536 IGNRNQASGERNSIMKKSNLGAHTASQGKVNTRSVTAKFPVHMRRLCRETSSKKSDLKGK 357
           IGN+N+    R SI K+ +L  +   Q K       A  P  MR+  RE  +  S LK +
Sbjct: 151 IGNQNKLISNR-SIPKEQSLKQNRHVQIKEIPIHGKAGSPPSMRK--REAPNTNSRLKQR 207

Query: 356 ENPELTVPKQSPYLRK 309
            + E     Q P  RK
Sbjct: 208 NSSEPPHLGQKPCPRK 223


>ref|XP_002272833.1| PREDICTED: uncharacterized protein LOC100246394 [Vitis vinifera]
          Length = 198

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 74/196 (37%), Positives = 101/196 (51%), Gaps = 8/196 (4%)
 Frame = -1

Query: 872 MYPRVKVRQVEEPEKDDEYVVQADRPAL-LCLKDFNSPTLQDNRVSRDKEYISGSPPSIA 696
           MYPR K  +V E E+D    +Q + P++ + L +        N     KE  S  PPS A
Sbjct: 1   MYPRAK--KVREQEQDSHISLQNESPSMPMVLLEVLESLSSHNSHPHVKEKRSNGPPSAA 58

Query: 695 RIPKSYIPSFT------LPAISSSKGENNKET-EDIRQNIRASSIPPPRAVLSSPDNDGI 537
           +IPKS + +        +P  S   G+N+K T ED +Q+ RA S+P PRAVLSSPDNDG+
Sbjct: 59  KIPKSCVKNLAAVRSPPIPVSSKGIGKNDKHTGEDEKQSGRACSVPRPRAVLSSPDNDGM 118

Query: 536 IGNRNQASGERNSIMKKSNLGAHTASQGKVNTRSVTAKFPVHMRRLCRETSSKKSDLKGK 357
           IGN+N+    R SI K+ +L  +   Q K       A  P  MR+  RE  +  S LK +
Sbjct: 119 IGNQNKLISNR-SIPKEQSLKQNRHVQIKEIPIHGKAGSPPSMRK--REAPNTNSRLKQR 175

Query: 356 ENPELTVPKQSPYLRK 309
            + E     Q P  RK
Sbjct: 176 NSSEPPHLGQKPCPRK 191


>ref|XP_004134039.1| PREDICTED: uncharacterized protein LOC101203442 [Cucumis sativus]
           gi|449487474|ref|XP_004157644.1| PREDICTED:
           uncharacterized LOC101203442 [Cucumis sativus]
          Length = 219

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
 Frame = -1

Query: 869 YPRVKVRQVEEPEKDDEYVVQADRPALLCLKDFNSPTLQD--NRVSRDKEYISGSPPSIA 696
           YP+VKVR+ EE   D   V +  R  LL LKD  S  LQD  N   + KE+   S  S A
Sbjct: 31  YPKVKVRE-EENLDDRPVVYEQKRSYLLSLKDLESLFLQDSSNTPGKVKEH-RVSLLSCA 88

Query: 695 RIPKSYIPSFTLPAISSSKGENNKET---EDIRQNIRASSIPPPRAVLSSPDNDGIIGNR 525
           +IPK+   +   P+ S  +      T   ED + NIRASSIP PRAV+SSP+ND +IG +
Sbjct: 89  KIPKACSTNEIKPSTSEPQESERSCTIVDEDNKANIRASSIPMPRAVVSSPENDQMIGKK 148

Query: 524 NQASGERNSIMKKSNLGAHTASQGKVNTRSVTAKFPVHMRRLCRETSSK 378
           N+ + E+ S++K  N      SQ K+  R    +  +  RR    T SK
Sbjct: 149 NRKTTEKPSVLKNCNSVQSRHSQCKIIARHSANENSISSRRSKDTTDSK 197


>ref|XP_003556341.1| PREDICTED: uncharacterized protein LOC100784229 [Glycine max]
          Length = 190

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 65/190 (34%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
 Frame = -1

Query: 872 MYPRVKVRQVEEPEKDDEYVVQADRPALLCLKDFNSPTLQDNRVSRDKEYISGSPPSIAR 693
           MYP+VKVR       DD+  +       L LK   SP +    VS           SI +
Sbjct: 1   MYPKVKVRH-----DDDDAELGLKAFLSLYLKPSPSPVMDQKVVST---------ASIVK 46

Query: 692 IPKSYIPSFTLP-------------AISSSKG----ENNKETEDIRQNIRASSIPPPRAV 564
            PK Y+P  T+P             ++S S G    E +  T++ + NIRASSIP PRAV
Sbjct: 47  APKCYVP-VTIPRVLVTEEDSGDFSSVSDSSGATGSEKDDSTDENKVNIRASSIPRPRAV 105

Query: 563 LSSPDNDGIIGNRNQASGERNSIMKKSNLGAHTASQGKVNTRSVTAKFPVHMRRLCRETS 384
           +SSP+ND +IGNRN+    R S  K   +  +  +  KV +  VT   P   R+     S
Sbjct: 106 ISSPENDMMIGNRNKNGDGRLSASKNGGVLENRHAHCKVKSHDVT-DIPPDTRKQREPGS 164

Query: 383 SKKSDLKGKE 354
             K+D  GK+
Sbjct: 165 KDKADPVGKK 174


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