BLASTX nr result

ID: Coptis23_contig00012574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012574
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus ...   150   8e-35
ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   150   1e-34
emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Ar...   150   1e-34
ref|XP_002871023.1| hypothetical protein ARALYDRAFT_487101 [Arab...   150   1e-34
ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subuni...   150   1e-34

>ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223541383|gb|EEF42934.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 364

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/82 (84%), Positives = 77/82 (93%)
 Frame = +1

Query: 67  SPIQATMFPGDGIGPEIAESVKKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLESVR 246
           +PI AT+FPGDGIGPEIAESVK+V   A+VPI+WEEH+VGD++DPRTQSFLTWESLESVR
Sbjct: 32  TPITATLFPGDGIGPEIAESVKQVFKEAEVPIEWEEHYVGDQIDPRTQSFLTWESLESVR 91

Query: 247 TNRVGLKGPMATPIGKGHRSLN 312
            NRVGLKGPMATPIGKGHRSLN
Sbjct: 92  RNRVGLKGPMATPIGKGHRSLN 113


>ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Cucumis sativus]
           gi|449524456|ref|XP_004169239.1| PREDICTED: isocitrate
           dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial-like [Cucumis sativus]
          Length = 372

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/82 (84%), Positives = 77/82 (93%)
 Frame = +1

Query: 67  SPIQATMFPGDGIGPEIAESVKKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLESVR 246
           +PI+AT+FPGDGIGPEIAESVK+V  TA VPI+WEEH+VGD++DPRTQSFLTWESLESVR
Sbjct: 40  TPIRATLFPGDGIGPEIAESVKQVFRTADVPIEWEEHYVGDEIDPRTQSFLTWESLESVR 99

Query: 247 TNRVGLKGPMATPIGKGHRSLN 312
            N VGLKGPMATPIGKGHRSLN
Sbjct: 100 RNGVGLKGPMATPIGKGHRSLN 121


>emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Arabidopsis thaliana]
           gi|9757780|dbj|BAB08389.1| 3-isopropylmalate
           dehydrogenase [Arabidopsis thaliana]
          Length = 372

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +1

Query: 61  SMSPIQATMFPGDGIGPEIAESVKKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLES 240
           S +PI AT+FPGDGIGPEIAESVKKV  TA VPI+WEEH+VG ++DPRTQSFLTWESLES
Sbjct: 38  STTPITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLES 97

Query: 241 VRTNRVGLKGPMATPIGKGHRSLN 312
           VR N+VGLKGPMATPIGKGHRSLN
Sbjct: 98  VRRNKVGLKGPMATPIGKGHRSLN 121


>ref|XP_002871023.1| hypothetical protein ARALYDRAFT_487101 [Arabidopsis lyrata subsp.
           lyrata] gi|297316860|gb|EFH47282.1| hypothetical protein
           ARALYDRAFT_487101 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +1

Query: 61  SMSPIQATMFPGDGIGPEIAESVKKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLES 240
           S +PI AT+FPGDGIGPEIAESVKKV  TA VPI+WEEH+VG ++DPRTQSFLTWESLES
Sbjct: 39  STTPITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLES 98

Query: 241 VRTNRVGLKGPMATPIGKGHRSLN 312
           VR N+VGLKGPMATPIGKGHRSLN
Sbjct: 99  VRRNKVGLKGPMATPIGKGHRSLN 122


>ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana] gi|75249591|sp|Q945K7.1|IDH5_ARATH RecName:
           Full=Isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial; AltName: Full=IDH-V; AltName:
           Full=Isocitric dehydrogenase 5; AltName:
           Full=NAD(+)-specific ICDH 5; Flags: Precursor
           gi|15724320|gb|AAL06553.1|AF412100_1 W25EPL23M/W25EPL23M
           [Arabidopsis thaliana] gi|20466714|gb|AAM20674.1|
           putative protein [Arabidopsis thaliana]
           gi|30725594|gb|AAP37819.1| At5g03290 [Arabidopsis
           thaliana] gi|332003198|gb|AED90581.1| Isocitrate
           dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana]
          Length = 374

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +1

Query: 61  SMSPIQATMFPGDGIGPEIAESVKKVLNTAQVPIQWEEHFVGDKVDPRTQSFLTWESLES 240
           S +PI AT+FPGDGIGPEIAESVKKV  TA VPI+WEEH+VG ++DPRTQSFLTWESLES
Sbjct: 40  STTPITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLES 99

Query: 241 VRTNRVGLKGPMATPIGKGHRSLN 312
           VR N+VGLKGPMATPIGKGHRSLN
Sbjct: 100 VRRNKVGLKGPMATPIGKGHRSLN 123


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