BLASTX nr result

ID: Coptis23_contig00012550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012550
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26155.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylas...   163   2e-38
emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]   161   6e-38
ref|XP_003528663.1| PREDICTED: S-adenosylmethionine decarboxylas...   152   2e-35
ref|XP_003609535.1| S-adenosylmethionine decarboxylase proenzyme...   150   1e-34

>emb|CBI26155.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/93 (84%), Positives = 87/93 (93%)
 Frame = -2

Query: 285 MAISGFEGFEKRLEINFSGDDPMVSIGLRQLDFELIEEVLDAVQCTVVSAVGNEFFDAYV 106
           MA+SGFEGFEKRLE++FSGDDP+V +GLR LDFE +E+VL AVQCTVVSAVGN +FDAYV
Sbjct: 1   MAVSGFEGFEKRLELHFSGDDPVVGMGLRHLDFESLEQVLHAVQCTVVSAVGNHYFDAYV 60

Query: 105 LSESSLFVYPTKIIIKTCGTTQLLKSIPPLLAH 7
           LSESSLFVYPTKIIIKTCGTTQLLKSIPPLL H
Sbjct: 61  LSESSLFVYPTKIIIKTCGTTQLLKSIPPLLHH 93


>ref|XP_002277316.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Vitis
           vinifera]
          Length = 350

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/93 (84%), Positives = 87/93 (93%)
 Frame = -2

Query: 285 MAISGFEGFEKRLEINFSGDDPMVSIGLRQLDFELIEEVLDAVQCTVVSAVGNEFFDAYV 106
           MA+SGFEGFEKRLE++FSGDDP+V +GLR LDFE +E+VL AVQCTVVSAVGN +FDAYV
Sbjct: 1   MAVSGFEGFEKRLELHFSGDDPVVGMGLRHLDFESLEQVLHAVQCTVVSAVGNHYFDAYV 60

Query: 105 LSESSLFVYPTKIIIKTCGTTQLLKSIPPLLAH 7
           LSESSLFVYPTKIIIKTCGTTQLLKSIPPLL H
Sbjct: 61  LSESSLFVYPTKIIIKTCGTTQLLKSIPPLLHH 93


>emb|CAN76568.1| hypothetical protein VITISV_030214 [Vitis vinifera]
          Length = 350

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/93 (83%), Positives = 86/93 (92%)
 Frame = -2

Query: 285 MAISGFEGFEKRLEINFSGDDPMVSIGLRQLDFELIEEVLDAVQCTVVSAVGNEFFDAYV 106
           MA+SGFEGFEKRLE++FSGDDP+V +GLR LDFE +E+VL AVQCTVVSAVGN +FDAYV
Sbjct: 1   MAVSGFEGFEKRLELHFSGDDPVVGMGLRHLDFESLEQVLHAVQCTVVSAVGNHYFDAYV 60

Query: 105 LSESSLFVYPTKIIIKTCGTTQLLKSIPPLLAH 7
           LSESSLF YPTKIIIKTCGTTQLLKSIPPLL H
Sbjct: 61  LSESSLFXYPTKIIIKTCGTTQLLKSIPPLLHH 93


>ref|XP_003528663.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like
           [Glycine max]
          Length = 346

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/96 (78%), Positives = 88/96 (91%), Gaps = 1/96 (1%)
 Frame = -2

Query: 285 MAISGFEGFEKRLEINFSGDDP-MVSIGLRQLDFELIEEVLDAVQCTVVSAVGNEFFDAY 109
           MA+SGFEGFEKRLE++F GDDP M  +G+R+L+FE +E+VL+AVQCTVVSAVGN +FDAY
Sbjct: 1   MAVSGFEGFEKRLELHFFGDDPAMFPLGIRKLEFESLEQVLEAVQCTVVSAVGNSYFDAY 60

Query: 108 VLSESSLFVYPTKIIIKTCGTTQLLKSIPPLLAHAH 1
           VLSESSLFVYPTKIIIKTCGTTQLLKSI PL+ +AH
Sbjct: 61  VLSESSLFVYPTKIIIKTCGTTQLLKSILPLIHYAH 96


>ref|XP_003609535.1| S-adenosylmethionine decarboxylase proenzyme [Medicago truncatula]
           gi|355510590|gb|AES91732.1| S-adenosylmethionine
           decarboxylase proenzyme [Medicago truncatula]
          Length = 346

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/96 (77%), Positives = 88/96 (91%), Gaps = 1/96 (1%)
 Frame = -2

Query: 285 MAISGFEGFEKRLEINFSGDDPMV-SIGLRQLDFELIEEVLDAVQCTVVSAVGNEFFDAY 109
           MA+SGFEGFEKRLE++F GDDP+   +GLR++DFE I++VL+AVQCTVVSAVGN +FDAY
Sbjct: 1   MAVSGFEGFEKRLELHFFGDDPITFQLGLRKIDFESIQQVLEAVQCTVVSAVGNSYFDAY 60

Query: 108 VLSESSLFVYPTKIIIKTCGTTQLLKSIPPLLAHAH 1
           VLSESSLFVYPTKIIIKTCGTTQLLKSI PL+ +A+
Sbjct: 61  VLSESSLFVYPTKIIIKTCGTTQLLKSILPLIHYAN 96


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