BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012524
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21205.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]      191   9e-47
ref|NP_001105836.1| protein RIK [Zea mays] gi|122211828|sp|Q32SG...   176   2e-42
gb|ACN35254.1| unknown [Zea mays] gi|414865516|tpg|DAA44073.1| T...   176   3e-42
ref|XP_003558500.1| PREDICTED: protein RIK-like [Brachypodium di...   173   1e-41

>emb|CBI21205.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  192 bits (488), Expect = 3e-47
 Identities = 116/214 (54%), Positives = 135/214 (63%), Gaps = 48/214 (22%)
 Frame = +1

Query: 46  KKKKKTMTENS--RPKVSEEFXXXXXXXSAKQRKRRKWDEPAEYFISA------------ 183
           ++K+  M E+S  RP  S+E        + +QRK+RKWD+PAE  +SA            
Sbjct: 41  QRKQNNMIEDSCPRPASSDE------ASAIRQRKKRKWDQPAESLVSAGVALPGVLPLGN 94

Query: 184 ------------AP----------------------FTANIPQKINLLKIQDELIAREIV 261
                       AP                        + I QK+N  KIQDELIAREI+
Sbjct: 95  VGPLVGIPLAGVAPPSSALLTNVTIPPVFQTSSIQQHASAIVQKLNQPKIQDELIAREII 154

Query: 262 INDAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKE 441
           INDAESTVRYKLTKRQ Q+EIQ+CTGAVVITRGKYRPPN LPD EKPLYLHISAG+HLK+
Sbjct: 155 INDAESTVRYKLTKRQMQEEIQKCTGAVVITRGKYRPPNALPDGEKPLYLHISAGAHLKD 214

Query: 442 TAERIIAVDHAAAMVEEMLKQGQNSHPTSIPFHS 543
           TAERI AVD AAAMVEEMLKQGQNS   S+P +S
Sbjct: 215 TAERIKAVDRAAAMVEEMLKQGQNSE--SVPSNS 246


>ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]
          Length = 566

 Score =  191 bits (484), Expect = 9e-47
 Identities = 113/205 (55%), Positives = 130/205 (63%), Gaps = 48/205 (23%)
 Frame = +1

Query: 46  KKKKKTMTENS--RPKVSEEFXXXXXXXSAKQRKRRKWDEPAEYFISA------------ 183
           ++K+  M E+S  RP  S+E        + +QRK+RKWD+PAE  +SA            
Sbjct: 87  QRKQNNMIEDSCPRPASSDE------ASAIRQRKKRKWDQPAESLVSAGVALPGVLPLGN 140

Query: 184 ------------AP----------------------FTANIPQKINLLKIQDELIAREIV 261
                       AP                        + I QK+N  KIQDELIAREI+
Sbjct: 141 VGPLVGIPLAGVAPPSSALLTNVTIPPVFQTSSIQQHASAIVQKLNQPKIQDELIAREII 200

Query: 262 INDAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKE 441
           INDAESTVRYKLTKRQ Q+EIQ+CTGAVVITRGKYRPPN LPD EKPLYLHISAG+HLK+
Sbjct: 201 INDAESTVRYKLTKRQMQEEIQKCTGAVVITRGKYRPPNALPDGEKPLYLHISAGAHLKD 260

Query: 442 TAERIIAVDHAAAMVEEMLKQGQNS 516
           TAERI AVD AAAMVEEMLKQGQNS
Sbjct: 261 TAERIKAVDRAAAMVEEMLKQGQNS 285


>ref|NP_001105836.1| protein RIK [Zea mays] gi|122211828|sp|Q32SG5.1|RIK_MAIZE RecName:
           Full=Protein RIK; AltName: Full=Rough sheath
           2-interacting KH domain protein; Short=RS2-interacting
           KH domain protein gi|62997479|gb|AAY24682.1| ROUGH
           SHEATH2-interacting KH-domain protein [Zea mays]
          Length = 616

 Score =  176 bits (447), Expect = 2e-42
 Identities = 102/214 (47%), Positives = 127/214 (59%), Gaps = 52/214 (24%)
 Frame = +1

Query: 64  MTENSRPKVSEEFXXXXXXXSAKQRKRRKWDEPAEYFISAA------------------- 186
           MTE+   KV++E         + +RK+RKWD+PAE  +SAA                   
Sbjct: 1   MTEDRAHKVADE--PAASGRQSPERKKRKWDQPAEDLVSAAVTAAAVSGMPVMNFGALPG 58

Query: 187 ------------------PFTANIP---------------QKINLLKIQDELIAREIVIN 267
                             P   ++P               QK++  KI DE+IAREIVIN
Sbjct: 59  VVLPGVTAYGAATLPSVVPVPYSLPPHIAPSVLQNAAAAAQKLSQAKIPDEVIAREIVIN 118

Query: 268 DAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKETA 447
           DA+ +VRYKLTKRQTQ+EIQ+CT  V+ITRGKY PPN+LPD EKPLYLHISAGS LK+TA
Sbjct: 119 DADPSVRYKLTKRQTQEEIQKCTNTVIITRGKYHPPNLLPDGEKPLYLHISAGSQLKDTA 178

Query: 448 ERIIAVDHAAAMVEEMLKQGQNSHPTSIPFHSTT 549
           ERI AVD AA+M+EE+LKQG  S   S+PF S+T
Sbjct: 179 ERIKAVDRAASMIEEILKQGTTSESISVPFSSST 212


>gb|ACN35254.1| unknown [Zea mays] gi|414865516|tpg|DAA44073.1| TPA: putative ROUGH
           SHEATH2-interacting KH-domain (RIK) protein [Zea mays]
          Length = 657

 Score =  176 bits (445), Expect = 3e-42
 Identities = 102/214 (47%), Positives = 126/214 (58%), Gaps = 52/214 (24%)
 Frame = +1

Query: 64  MTENSRPKVSEEFXXXXXXXSAKQRKRRKWDEPAEYFISAA------------------- 186
           MTE+   KV++E           +RK+RKWD+PAE  +SAA                   
Sbjct: 1   MTEDRAHKVADE--PAASGRQRPERKKRKWDQPAEDLVSAAVTAAAVSGMPVMNFGALPG 58

Query: 187 ------------------PFTANIP---------------QKINLLKIQDELIAREIVIN 267
                             P   ++P               QK++  KI DE+IAREIVIN
Sbjct: 59  VVLPGVTAYGAATLPSVVPVPYSLPPHIAPSVLQNAAAAAQKLSQAKIPDEVIAREIVIN 118

Query: 268 DAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKETA 447
           DA+ +VRYKLTKRQTQ+EIQ+CT  V+ITRGKY PPN+LPD EKPLYLHISAGS LK+TA
Sbjct: 119 DADPSVRYKLTKRQTQEEIQKCTNTVIITRGKYHPPNLLPDGEKPLYLHISAGSQLKDTA 178

Query: 448 ERIIAVDHAAAMVEEMLKQGQNSHPTSIPFHSTT 549
           ERI AVD AA+M+EE+LKQG  S   S+PF S+T
Sbjct: 179 ERIKAVDRAASMIEEILKQGTTSESISVPFSSST 212


>ref|XP_003558500.1| PREDICTED: protein RIK-like [Brachypodium distachyon]
          Length = 661

 Score =  173 bits (439), Expect = 1e-41
 Identities = 106/212 (50%), Positives = 120/212 (56%), Gaps = 52/212 (24%)
 Frame = +1

Query: 64  MTENSRPKVSEEFXXXXXXXSAKQRKRRKWDEPAEYFISAA------------------- 186
           MTE   P+ S E        + KQRK+RKWD+PAE  +SAA                   
Sbjct: 1   MTEEGTPRASGE-----PTAATKQRKKRKWDQPAEDIVSAAAEAAAVAGLPVLNFGALSG 55

Query: 187 ------------PFTANIP---------------------QKINLLKIQDELIAREIVIN 267
                       P    IP                     QK++  KI DELIAREIVIN
Sbjct: 56  VQFPGITTYPAAPLPNAIPAPYALPPQLTPSVLQSAAAAVQKLSQAKIPDELIAREIVIN 115

Query: 268 DAESTVRYKLTKRQTQDEIQRCTGAVVITRGKYRPPNVLPDSEKPLYLHISAGSHLKETA 447
           DA+ +VRYKLTKRQTQDEIQRCT  V+ITRGKY PPN  PD EKPLYLHISAGS LK+TA
Sbjct: 116 DADPSVRYKLTKRQTQDEIQRCTCTVIITRGKYHPPNGQPDGEKPLYLHISAGSQLKDTA 175

Query: 448 ERIIAVDHAAAMVEEMLKQGQNSHPTSIPFHS 543
           ERI AVD AA+M+EE+LKQGQ    TS  F S
Sbjct: 176 ERIKAVDRAASMIEEILKQGQMPETTSTHFPS 207