BLASTX nr result
ID: Coptis23_contig00012188
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012188 (531 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis th... 65 6e-09 ref|XP_003606700.1| DVL9 [Medicago truncatula] gi|355507755|gb|A... 64 1e-08 ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arab... 64 1e-08 ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-08 ref|XP_003597386.1| hypothetical protein MTR_2g097570 [Medicago ... 59 4e-07 >ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis thaliana] gi|42822053|tpg|DAA02281.1| TPA_exp: DVL10 [Arabidopsis thaliana] gi|332657874|gb|AEE83274.1| protein rotundifolia like 12 [Arabidopsis thaliana] Length = 55 Score = 65.1 bits (157), Expect = 6e-09 Identities = 27/38 (71%), Positives = 32/38 (84%) Frame = +1 Query: 205 SRFGNRCLTMAKQQRARFYILRRCIAMLLCWQAHAIRD 318 +RFG+RCL MAKQQR R YILRRC++MLLCW H+I D Sbjct: 18 TRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55 >ref|XP_003606700.1| DVL9 [Medicago truncatula] gi|355507755|gb|AES88897.1| DVL9 [Medicago truncatula] Length = 102 Score = 64.3 bits (155), Expect = 1e-08 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 4/64 (6%) Frame = +1 Query: 127 SPLTSRSYIVPSSRSINNIMDSSRSTSR----FGNRCLTMAKQQRARFYILRRCIAMLLC 294 SPL +S+ SS + NN + SRS S+ G +C +AK+Q+ARFYI+RRC+AML+C Sbjct: 37 SPLLLKSFSQKSSSTSNNSGNLSRSYSQKNPSIGKKCTNIAKEQKARFYIMRRCVAMLVC 96 Query: 295 WQAH 306 W H Sbjct: 97 WHKH 100 >ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arabidopsis lyrata subsp. lyrata] gi|297308970|gb|EFH39395.1| hypothetical protein ARALYDRAFT_332982 [Arabidopsis lyrata subsp. lyrata] Length = 51 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/42 (69%), Positives = 34/42 (80%) Frame = +1 Query: 193 SRSTSRFGNRCLTMAKQQRARFYILRRCIAMLLCWQAHAIRD 318 +R TS FG+RCL MAKQQR R YILRRC++MLLCW H+I D Sbjct: 11 NRKTS-FGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 51 >ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|222866402|gb|EEF03533.1| predicted protein [Populus trichocarpa] Length = 59 Score = 62.4 bits (150), Expect = 4e-08 Identities = 27/36 (75%), Positives = 30/36 (83%) Frame = +1 Query: 211 FGNRCLTMAKQQRARFYILRRCIAMLLCWQAHAIRD 318 F RCL+MAKQQ+ RFYIL RCI+MLLCW HAIRD Sbjct: 24 FRRRCLSMAKQQKTRFYILGRCISMLLCWHDHAIRD 59 >ref|XP_003597386.1| hypothetical protein MTR_2g097570 [Medicago truncatula] gi|355486434|gb|AES67637.1| hypothetical protein MTR_2g097570 [Medicago truncatula] Length = 86 Score = 58.9 bits (141), Expect = 4e-07 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 14/72 (19%) Frame = +1 Query: 133 LTSRSYIVPSSRSINNIMDSSRSTSR--------------FGNRCLTMAKQQRARFYILR 270 L SRS SS S ++++ SS S+S+ G +C +AK+Q+ARFYI+R Sbjct: 12 LFSRSSSTRSSTSNSSLLRSSSSSSKCNLQRSFSQKNPSSIGRKCTNLAKEQKARFYIMR 71 Query: 271 RCIAMLLCWQAH 306 RC+AML+CW H Sbjct: 72 RCVAMLVCWHKH 83