BLASTX nr result
ID: Coptis23_contig00012127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012127
(992 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526452.1| yth domain-containing protein, putative [Ric... 212 5e-72
emb|CBI29706.3| unnamed protein product [Vitis vinifera] 202 8e-72
ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249... 202 8e-72
ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|2... 211 8e-72
emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera] 202 6e-70
>ref|XP_002526452.1| yth domain-containing protein, putative [Ricinus communis]
gi|223534232|gb|EEF35947.1| yth domain-containing
protein, putative [Ricinus communis]
Length = 582
Score = 212 bits (539), Expect(2) = 5e-72
Identities = 97/120 (80%), Positives = 109/120 (90%)
Frame = -1
Query: 983 YDNAKFFIIKSYSEDDIHKSIKYDVWSSTPTGNKKLNAAFNDAQTRHSETGTGCPIFLFF 804
Y NAKF++IKSY+EDDIHKSIKY VW+STP GNKKL+AAF +A+ R SETGT CPIFLFF
Sbjct: 336 YKNAKFYVIKSYNEDDIHKSIKYAVWASTPNGNKKLDAAFCEAEQRSSETGTKCPIFLFF 395
Query: 803 SVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWSGFFHLKWHIIKDIPNNRLRHIILENND 624
SVNGSGQF+GLAEM G VDFEK+MDFWQ DKWSGFF +KWH+IKDIPNN+LRHIILENND
Sbjct: 396 SVNGSGQFVGLAEMVGQVDFEKDMDFWQLDKWSGFFPVKWHVIKDIPNNQLRHIILENND 455
Score = 86.7 bits (213), Expect(2) = 5e-72
Identities = 47/108 (43%), Positives = 70/108 (64%)
Frame = -2
Query: 538 NDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEEP 359
ND +PVT++RDTQE+G +QGLEML+IFK Y + S+LDD+ FYE+++ S+ RK +K
Sbjct: 454 NDKRPVTFSRDTQEIGFEQGLEMLNIFKGYSSKASLLDDFNFYENRETSVD-RKSNKLAT 512
Query: 358 SNYDNHKTEFLERDFEAGLRRAEEAPMTVRKVSEYTSLATLARNLSLN 215
+ + + ++G R+ EE T +K S +SL L +NLSLN
Sbjct: 513 LRMEINNNGDFPKHPKSGERKHEEESWT-KKTSNPSSLINLTKNLSLN 559
>emb|CBI29706.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 202 bits (515), Expect(2) = 8e-72
Identities = 90/124 (72%), Positives = 110/124 (88%)
Frame = -1
Query: 992 QISYDNAKFFIIKSYSEDDIHKSIKYDVWSSTPTGNKKLNAAFNDAQTRHSETGTGCPIF 813
Q Y+NAKF++IKS+SEDDIHK IKYDVW+STP GNKKL+AAF+DA+ + +ETGT PIF
Sbjct: 450 QTEYENAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKANETGTKFPIF 509
Query: 812 LFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWSGFFHLKWHIIKDIPNNRLRHIILE 633
LFFSVNGSGQF+G+AEM G VDF K+MDFWQ DKW+GFF +KWHI+KDIPN++LRHI LE
Sbjct: 510 LFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPNSQLRHITLE 569
Query: 632 NNDN 621
+N+N
Sbjct: 570 SNEN 573
Score = 95.1 bits (235), Expect(2) = 8e-72
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Frame = -2
Query: 538 NDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEEP 359
N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE+++KSL AR+ SK P
Sbjct: 571 NENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSLHARRSSKPPP 630
Query: 358 SNYDN--HKTEFLERDFEAGLRRAEEAPMTVRKVSEYTSLATLARNLSLN 215
+ + L + R+ EE T R + SL L +NLSL+
Sbjct: 631 PSQMEIYGSGDDLPKHLHGEERKTEEPARTSRS-HDPKSLINLTKNLSLS 679
>ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249242 [Vitis vinifera]
Length = 608
Score = 202 bits (515), Expect(2) = 8e-72
Identities = 90/124 (72%), Positives = 110/124 (88%)
Frame = -1
Query: 992 QISYDNAKFFIIKSYSEDDIHKSIKYDVWSSTPTGNKKLNAAFNDAQTRHSETGTGCPIF 813
Q Y+NAKF++IKS+SEDDIHK IKYDVW+STP GNKKL+AAF+DA+ + +ETGT PIF
Sbjct: 350 QTEYENAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKANETGTKFPIF 409
Query: 812 LFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWSGFFHLKWHIIKDIPNNRLRHIILE 633
LFFSVNGSGQF+G+AEM G VDF K+MDFWQ DKW+GFF +KWHI+KDIPN++LRHI LE
Sbjct: 410 LFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPNSQLRHITLE 469
Query: 632 NNDN 621
+N+N
Sbjct: 470 SNEN 473
Score = 95.1 bits (235), Expect(2) = 8e-72
Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Frame = -2
Query: 538 NDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEEP 359
N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE+++KSL AR+ SK P
Sbjct: 471 NENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSLHARRSSKPPP 530
Query: 358 SNYDN--HKTEFLERDFEAGLRRAEEAPMTVRKVSEYTSLATLARNLSLN 215
+ + L + R+ EE T R + SL L +NLSL+
Sbjct: 531 PSQMEIYGSGDDLPKHLHGEERKTEEPARTSRS-HDPKSLINLTKNLSLS 579
>ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|222839074|gb|EEE77425.1|
predicted protein [Populus trichocarpa]
Length = 350
Score = 211 bits (536), Expect(2) = 8e-72
Identities = 95/123 (77%), Positives = 110/123 (89%)
Frame = -1
Query: 992 QISYDNAKFFIIKSYSEDDIHKSIKYDVWSSTPTGNKKLNAAFNDAQTRHSETGTGCPIF 813
+I Y NAKFF+IKSY+EDDIHKSIKYDVW+STP GNKKL+AAF++A+ SETGT CPIF
Sbjct: 100 EIEYSNAKFFVIKSYNEDDIHKSIKYDVWASTPNGNKKLDAAFHNAEEVSSETGTKCPIF 159
Query: 812 LFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWSGFFHLKWHIIKDIPNNRLRHIILE 633
LFFSVNGSGQF+GLAEM G VDF K+MDFWQ DKW+GFF +KWH+IKDIPN +LRHI+LE
Sbjct: 160 LFFSVNGSGQFVGLAEMVGQVDFNKDMDFWQIDKWNGFFPVKWHVIKDIPNGQLRHIVLE 219
Query: 632 NND 624
NND
Sbjct: 220 NND 222
Score = 87.0 bits (214), Expect(2) = 8e-72
Identities = 45/108 (41%), Positives = 67/108 (62%)
Frame = -2
Query: 538 NDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEEP 359
ND VT++RDTQE+GL++GLEML+IFK+Y A TSMLDD+ FYE+++KSL +K +K
Sbjct: 221 NDGHSVTFSRDTQEIGLEKGLEMLNIFKSYSAKTSMLDDFNFYENREKSLNTKKSNKPAT 280
Query: 358 SNYDNHKTEFLERDFEAGLRRAEEAPMTVRKVSEYTSLATLARNLSLN 215
+ + + A + E +K + ++L L +NLSLN
Sbjct: 281 LRMEIFENSDFPK-HTAAEEKISEDDSRAKKTTNPSTLINLTKNLSLN 327
>emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]
Length = 812
Score = 202 bits (515), Expect(2) = 6e-70
Identities = 90/124 (72%), Positives = 110/124 (88%)
Frame = -1
Query: 992 QISYDNAKFFIIKSYSEDDIHKSIKYDVWSSTPTGNKKLNAAFNDAQTRHSETGTGCPIF 813
Q Y+NAKF++IKS+SEDDIHK IKYDVW+STP GNKKL+AAF+DA+ + +ETGT PIF
Sbjct: 353 QTEYENAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKANETGTKFPIF 412
Query: 812 LFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWSGFFHLKWHIIKDIPNNRLRHIILE 633
LFFSVNGSGQF+G+AEM G VDF K+MDFWQ DKW+GFF +KWHI+KDIPN++LRHI LE
Sbjct: 413 LFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPNSQLRHITLE 472
Query: 632 NNDN 621
+N+N
Sbjct: 473 SNEN 476
Score = 89.0 bits (219), Expect(2) = 6e-70
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = -2
Query: 538 NDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEEP 359
N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE+++KSL AR+ SK P
Sbjct: 474 NENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSLHARRSSKPPP 533