BLASTX nr result

ID: Coptis23_contig00011960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011960
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279713.1| PREDICTED: CASP-like protein At2g36330 [Viti...   233   5e-59
gb|AFK43639.1| unknown [Medicago truncatula]                          214   3e-53
ref|XP_003550739.1| PREDICTED: CASP-like protein At2g36330-like ...   211   3e-52
ref|XP_002274501.1| PREDICTED: CASP-like protein At2g36330-like ...   205   2e-50
ref|NP_181174.2| uncharacterized protein [Arabidopsis thaliana] ...   204   3e-50

>ref|XP_002279713.1| PREDICTED: CASP-like protein At2g36330 [Vitis vinifera]
          Length = 314

 Score =  233 bits (595), Expect = 5e-59
 Identities = 124/214 (57%), Positives = 144/214 (67%), Gaps = 9/214 (4%)
 Frame = -3

Query: 795 PLSPVIVVNRSIREELSAVSKXXXXXXXXXXXXXXXXXXSK---------TVSSILWRER 643
           PLS V+  NR++R+E+ AV                                V+SI+ R R
Sbjct: 99  PLSSVVTFNRAVRDEMPAVVTKVDPSGGRDGFTGGGGRVEDGGRERRPPGAVTSIVRRSR 158

Query: 642 RLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIGFVYA 463
           R  MVKRA LGFRV  VVFCLISFSVMAADKTQGW+GDSF RYKEYRYC+S+TVI FVY+
Sbjct: 159 REDMVKRAELGFRVCEVVFCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIAFVYS 218

Query: 462 GFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXSRVDDWVSNFGKDD 283
           GFQA DLAY L+T KH+  +H RY  +F MDQ+L Y          +RVDDW SN+GKD+
Sbjct: 219 GFQACDLAYHLVTQKHMFSNHSRYHLNFFMDQVLAYLLMSASSSAATRVDDWQSNWGKDE 278

Query: 282 FTVMASASTGMSFLAFVTFAFSSLISGYNLCTRS 181
           FT MASAS GMSFLAFV FAFSSLISGYNLC R+
Sbjct: 279 FTEMASASIGMSFLAFVAFAFSSLISGYNLCNRN 312


>gb|AFK43639.1| unknown [Medicago truncatula]
          Length = 288

 Score =  214 bits (545), Expect = 3e-53
 Identities = 102/150 (68%), Positives = 117/150 (78%)
 Frame = -3

Query: 633 MVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIGFVYAGFQ 454
           M  + ALGFR+  VV CLISFSVMAADKTQGW+GDSF RYKEYRYC+S+TVIGFVYAGFQ
Sbjct: 137 MTGKVALGFRISEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIGFVYAGFQ 196

Query: 453 AYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXSRVDDWVSNFGKDDFTV 274
           A +L Y LIT KHI+ HH R+ FDF MDQ+L Y          +RVDDW SN+GKD+FT 
Sbjct: 197 ACELGYQLITGKHIVNHHLRFHFDFLMDQVLAYLLISSASSAATRVDDWQSNWGKDEFTE 256

Query: 273 MASASTGMSFLAFVTFAFSSLISGYNLCTR 184
           MASAS  ++FLAF+ FA SSLISGYNLC R
Sbjct: 257 MASASIALAFLAFIAFAISSLISGYNLCNR 286


>ref|XP_003550739.1| PREDICTED: CASP-like protein At2g36330-like [Glycine max]
          Length = 262

 Score =  211 bits (536), Expect = 3e-52
 Identities = 103/153 (67%), Positives = 117/153 (76%)
 Frame = -3

Query: 645 RRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIGFVY 466
           +R  M K+ ALGFR+  VV CLISFSVMAADKT+GW+GDSF RYKEYRYC+SV VI FVY
Sbjct: 107 KREMMAKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVY 166

Query: 465 AGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXSRVDDWVSNFGKD 286
           A FQA DLAY ++T + II HH RY FDF MDQ+L Y          +RVDDW SN+GKD
Sbjct: 167 AAFQACDLAYQVVTGRRIINHHLRYHFDFFMDQVLAYLLVSAASSAATRVDDWQSNWGKD 226

Query: 285 DFTVMASASTGMSFLAFVTFAFSSLISGYNLCT 187
           DFT MASAS  ++FLAFV FA SSLISGYNLCT
Sbjct: 227 DFTEMASASIALTFLAFVAFAISSLISGYNLCT 259


>ref|XP_002274501.1| PREDICTED: CASP-like protein At2g36330-like [Vitis vinifera]
          Length = 285

 Score =  205 bits (521), Expect = 2e-50
 Identities = 112/216 (51%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
 Frame = -3

Query: 816 PIPVPVQPLSPVIVVNRSIREELSAVSKXXXXXXXXXXXXXXXXXXS------KTVSSIL 655
           P  +P    SPV+VVNRS+R+E   V+K                         K   SIL
Sbjct: 66  PTDMPATSPSPVVVVNRSVRDEPRMVTKVDLGAVDGIASIGVEERGGASARRGKLSLSIL 125

Query: 654 WRERRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIG 475
            R +R   V+RAALGFRV G +FCL+SFS+MA+DK QGW  DSF RYKE+RYC++V VIG
Sbjct: 126 RRPKRERAVERAALGFRVCGFLFCLVSFSIMASDKNQGWTLDSFDRYKEFRYCLAVNVIG 185

Query: 474 FVYAGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXSRVDDWVSNF 295
           FVY+G Q  DLA+ L T +H ++HH RY  DF MDQ+LTY          +RV+DW SN+
Sbjct: 186 FVYSGLQGCDLAFHLGTGQHALRHHLRYHLDFFMDQVLTYLLISASSSAATRVEDWQSNW 245

Query: 294 GKDDFTVMASASTGMSFLAFVTFAFSSLISGYNLCT 187
           GKD F  MA AS  MSFLAFV FA SSLISGY L T
Sbjct: 246 GKDKFPEMARASVWMSFLAFVAFAASSLISGYFLFT 281


>ref|NP_181174.2| uncharacterized protein [Arabidopsis thaliana]
           gi|75148783|sp|Q84WP5.1|CSPL8_ARATH RecName:
           Full=CASP-like protein At2g36330
           gi|27754604|gb|AAO22748.1| unknown protein [Arabidopsis
           thaliana] gi|330254140|gb|AEC09234.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 283

 Score =  204 bits (519), Expect = 3e-50
 Identities = 102/159 (64%), Positives = 122/159 (76%)
 Frame = -3

Query: 669 VSSILWRERRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCIS 490
           VS+IL R RR  +VK +ALGFR+  VV  LISFS+MAADKT+GW+GDSF RYKEYR+C+S
Sbjct: 119 VSAILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLS 178

Query: 489 VTVIGFVYAGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXSRVDD 310
           V V+ FVY+ FQA DLAY L+  KH+I HH R  F+F +DQ+L Y          +RVDD
Sbjct: 179 VNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDD 238

Query: 309 WVSNFGKDDFTVMASASTGMSFLAFVTFAFSSLISGYNL 193
           WVSN+GKD+FT MASAS  MSFLAF+ FAFSSLISGYNL
Sbjct: 239 WVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNL 277


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