BLASTX nr result

ID: Coptis23_contig00011598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011598
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511137.1| Protein DEK, putative [Ricinus communis] gi|...   135   1e-29
ref|XP_002318149.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_002280398.2| PREDICTED: uncharacterized protein LOC100245...   120   4e-25
emb|CBI15706.3| unnamed protein product [Vitis vinifera]              112   9e-23
ref|XP_003526944.1| PREDICTED: uncharacterized protein LOC100813...   110   6e-22

>ref|XP_002511137.1| Protein DEK, putative [Ricinus communis]
           gi|223550252|gb|EEF51739.1| Protein DEK, putative
           [Ricinus communis]
          Length = 570

 Score =  135 bits (340), Expect = 1e-29
 Identities = 88/164 (53%), Positives = 104/164 (63%), Gaps = 8/164 (4%)
 Frame = -2

Query: 894 AKSKTEKGTPTKREKDPKSVKVPAKSTKSPLKSVPNKGAATDGKVSGSNTTSKASIRKKQ 715
           AKSK +K TP K    PKSVK P KSTK    S   +GA      SGS + SK S  KKQ
Sbjct: 386 AKSK-DKVTPAKNH--PKSVKSPVKSTKRSSGSSSKQGATGTDGTSGSLSKSKGSASKKQ 442

Query: 714 GEIENKSQTSRPDLSGNKNTKKKQRSKL-----EGKISGK---EEEPSRDEMHAAVSDIL 559
            ++E +S   R   S +K T KKQ  KL     +GK       +E+P+R++MHA V DIL
Sbjct: 443 -KVEKESLRDRNVPSKDKGTSKKQAGKLPLKKDQGKAKSNRKAKEQPTREDMHAVVVDIL 501

Query: 558 KEVDFNTATLSDILRQLEKRFGMTLMHRKSEVKGIIEEVINSMS 427
           KEVDFNTATLSDILRQL   FG+ LMHRK+EVK II EVIN+MS
Sbjct: 502 KEVDFNTATLSDILRQLGTHFGVDLMHRKAEVKDIITEVINNMS 545


>ref|XP_002318149.1| predicted protein [Populus trichocarpa] gi|222858822|gb|EEE96369.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  124 bits (312), Expect = 2e-26
 Identities = 84/173 (48%), Positives = 98/173 (56%), Gaps = 17/173 (9%)
 Frame = -2

Query: 894 AKSKTEKGTPTKREKDPKSVKVPAKSTKSPLKSVPNKGAATDGKVSGSNTTSKASIRKKQ 715
           AKS  EK T  K+    K VK   KSTK    S   KGA      SGS + SK S  KKQ
Sbjct: 374 AKS-AEKATLGKKRTPAKPVKGLEKSTKKSSDSSSKKGAKDTDGTSGSISKSKGSASKKQ 432

Query: 714 GEIENKSQTSRPDLSGNKNTKKKQRSKLEGKISGKEE-----------------EPSRDE 586
            ++E +S   R   S +K   KKQ +K   K S K++                 EP+R E
Sbjct: 433 -KVEKESPKDRSASSKDKVNAKKQSTKSPSKASAKDQAFAVKKGKAKSNKKAKAEPTRQE 491

Query: 585 MHAAVSDILKEVDFNTATLSDILRQLEKRFGMTLMHRKSEVKGIIEEVINSMS 427
           MHA V +ILKEVDFNTATLSDILRQL   FG+ LMHRK+EVK II +VINSMS
Sbjct: 492 MHAVVVNILKEVDFNTATLSDILRQLGAHFGIDLMHRKAEVKDIITDVINSMS 544


>ref|XP_002280398.2| PREDICTED: uncharacterized protein LOC100245819 [Vitis vinifera]
          Length = 569

 Score =  120 bits (301), Expect = 4e-25
 Identities = 74/156 (47%), Positives = 90/156 (57%), Gaps = 11/156 (7%)
 Frame = -2

Query: 861 KREKDPKSVKVPAKSTKSPLKSVPNKGAATDGKVSGSNTTSKASIRKKQGEIENKSQTSR 682
           K+    +SVK PAK TK    S   K  A D  V+  +  S A  RK     E +SQ  +
Sbjct: 382 KKASASRSVKSPAKLTKKSSSSTSKKADADDTSVAPKSKESSAKKRKA----EKESQKDQ 437

Query: 681 PDLSGNKNTKKKQRSKLEGKISGKE-----------EEPSRDEMHAAVSDILKEVDFNTA 535
            D +  K   KK+ S+   K+S K+            EPSR+EMHA V DILK+VDFNTA
Sbjct: 438 SDPAKEKTASKKRSSRATEKVSSKDLGKGKTSKKAKPEPSREEMHAVVVDILKQVDFNTA 497

Query: 534 TLSDILRQLEKRFGMTLMHRKSEVKGIIEEVINSMS 427
           TLSDILRQL   F + LMHRK+EVK II +VINSMS
Sbjct: 498 TLSDILRQLGTHFDLDLMHRKTEVKAIITDVINSMS 533


>emb|CBI15706.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  112 bits (281), Expect = 9e-23
 Identities = 69/156 (44%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
 Frame = -2

Query: 861 KREKDPKSVKVPAKSTKSPLKSVPNKGAATDGKVSGSNTTSKASIRKKQGEIENKSQTSR 682
           K+    +SVK PAK TK    S   K  A D  V+  +  S A  RK     E +SQ  +
Sbjct: 383 KKASASRSVKSPAKLTKKSSSSTSKKADADDTSVAPKSKESSAKKRKA----EKESQKDQ 438

Query: 681 PDLSGNKNTKKKQRSKLEGKISGKE-----------EEPSRDEMHAAVSDILKEVDFNTA 535
            D +  K   KK+ S+   K+S K+            EPSR+EMHA V DILK+VDFNTA
Sbjct: 439 SDPAKEKTASKKRSSRATEKVSSKDLGKGKTSKKAKPEPSREEMHAVVVDILKQVDFNTA 498

Query: 534 TLSDILRQLEKRFGMTLMHRKSEVKGIIEEVINSMS 427
           TLSDILRQL   F + LMHRK+EVK II +V + ++
Sbjct: 499 TLSDILRQLGTHFDLDLMHRKTEVKAIITDVCSGLT 534


>ref|XP_003526944.1| PREDICTED: uncharacterized protein LOC100813123 [Glycine max]
          Length = 549

 Score =  110 bits (274), Expect = 6e-22
 Identities = 78/175 (44%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
 Frame = -2

Query: 897 EAKSKTEKGTPTKREKDPK--------SVK-VPAKSTKS----PLKSVPNKGAATDGKVS 757
           E KSK+ K T  K  K+          SVK  P K  KS      K    KG A     S
Sbjct: 353 EEKSKSRKRTSKKAVKESSVSKADRTSSVKKTPVKDAKSIEKTKKKPTSKKGVAEHDSAS 412

Query: 756 GSNTTSKASIRKKQGEIENKSQTSRPDLSGNKNTKKKQRS--KLEGKISGKEE---EPSR 592
            S + SK    KKQ     K  T +   +  K T K  ++  K +GK    ++   EP++
Sbjct: 413 ASVSKSKQPASKKQKTASEKQDT-KGKAASKKRTDKSSKALVKDQGKSKSNKKAKAEPTK 471

Query: 591 DEMHAAVSDILKEVDFNTATLSDILRQLEKRFGMTLMHRKSEVKGIIEEVINSMS 427
            +MHA V DILKEVDFNTATLSDILRQL   FGM LMHRK+EVK II +VIN+MS
Sbjct: 472 QDMHAVVVDILKEVDFNTATLSDILRQLGTHFGMDLMHRKAEVKDIITDVINNMS 526


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