BLASTX nr result

ID: Coptis23_contig00010462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00010462
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis...   209   6e-52
ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
gb|AFK42356.1| unknown [Medicago truncatula]                          206   5e-51
ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [...   201   1e-49
gb|AFK48784.1| unknown [Lotus japonicus]                              199   4e-49

>ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis vinifera]
           gi|297735759|emb|CBI18446.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  209 bits (531), Expect = 6e-52
 Identities = 102/153 (66%), Positives = 120/153 (78%)
 Frame = +3

Query: 30  EVGKPLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPL 209
           E+GKP+IV+ICG+L+YYHCA+RN                  AILG+LFRQ+NISVPVDPL
Sbjct: 6   EIGKPVIVMICGTLIYYHCAYRNSTLLTLVSDVLIVLLCSLAILGLLFRQINISVPVDPL 65

Query: 210 EWQISQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGAT 389
           EWQISQD AN I+A  ANT+GAAESVLRVAATGHDKRLF+KVV  LY+LSALGRV SG T
Sbjct: 66  EWQISQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVKVVVCLYVLSALGRVVSGVT 125

Query: 390 VAYTGLCFFCLYFFAQSSQSLGACTSQFLGRRD 488
           VAY GL  FCLY FA++SQ++ AC S+F+ RRD
Sbjct: 126 VAYAGLWLFCLYMFAENSQTICACMSRFMRRRD 158


>ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|222851715|gb|EEE89262.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  206 bits (524), Expect = 4e-51
 Identities = 100/153 (65%), Positives = 117/153 (76%)
 Frame = +3

Query: 24  GVEVGKPLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVD 203
           G E+GK LI L+ G+LVYYHCA+R+                  AILG+LFRQ+NISVPVD
Sbjct: 19  GGEIGKALIGLVSGTLVYYHCAYRDSSLFSLMSDVLIVLLCSLAILGLLFRQLNISVPVD 78

Query: 204 PLEWQISQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASG 383
           PLEWQISQD AN+I+AWFANT+GAAESVLRVAATGHDKRLF KV+  LY+LSALGR+ SG
Sbjct: 79  PLEWQISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVIVCLYVLSALGRLVSG 138

Query: 384 ATVAYTGLCFFCLYFFAQSSQSLGACTSQFLGR 482
            T+AY  LC FCLY  A++SQS  AC S+FLGR
Sbjct: 139 VTIAYAALCLFCLYMLAENSQSGSACISRFLGR 171


>gb|AFK42356.1| unknown [Medicago truncatula]
          Length = 180

 Score =  206 bits (523), Expect = 5e-51
 Identities = 99/154 (64%), Positives = 116/154 (75%)
 Frame = +3

Query: 27  VEVGKPLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDP 206
           +E+GK +I L+CG+LVYYHCAF+N                  AILG+LFRQM I VPVDP
Sbjct: 17  IEIGKAIIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCSLAILGLLFRQMTIQVPVDP 76

Query: 207 LEWQISQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGA 386
           LEWQISQD AN I+A FANTVGAAESVLRVAATGHDKRLF KV+  LY LSALGR+A G 
Sbjct: 77  LEWQISQDTANTIVASFANTVGAAESVLRVAATGHDKRLFFKVILCLYALSALGRLALGI 136

Query: 387 TVAYTGLCFFCLYFFAQSSQSLGACTSQFLGRRD 488
           T+AY GLC FCLY FA+ SQS+ +C + FLGR++
Sbjct: 137 TIAYAGLCLFCLYMFAECSQSISSCLAWFLGRKN 170


>ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [Cucumis sativus]
          Length = 188

 Score =  201 bits (511), Expect = 1e-49
 Identities = 99/160 (61%), Positives = 114/160 (71%)
 Frame = +3

Query: 30  EVGKPLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPL 209
           EVGKP + LICGSLVYYHCAFRN                  AILG+LFR MN+SVPVDPL
Sbjct: 27  EVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPL 86

Query: 210 EWQISQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGAT 389
           EWQ+SQD AN++IAW ANT+GAAESVLRVAATGHDKRLF+KVV  LY LS LGR+ SG T
Sbjct: 87  EWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 146

Query: 390 VAYTGLCFFCLYFFAQSSQSLGACTSQFLGRRDFGLPMQD 509
           VAYTGLC  C+Y   ++S+S+ A  S  L R +     QD
Sbjct: 147 VAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQD 186


>gb|AFK48784.1| unknown [Lotus japonicus]
          Length = 183

 Score =  199 bits (507), Expect = 4e-49
 Identities = 98/160 (61%), Positives = 116/160 (72%)
 Frame = +3

Query: 30  EVGKPLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPL 209
           E+GK +I L+CG+LVYYHCA+RN                  AILG+LFRQMNI VPVDPL
Sbjct: 20  EMGKAIIALVCGTLVYYHCAYRNSTVVSLFSDVFIVLLCSLAILGLLFRQMNIQVPVDPL 79

Query: 210 EWQISQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGAT 389
           EWQISQD ANAI+A  ANTVGAAESVLRVAATGHDKRLF KV+  LY+LSA+GR+A G T
Sbjct: 80  EWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLYVLSAIGRLALGIT 139

Query: 390 VAYTGLCFFCLYFFAQSSQSLGACTSQFLGRRDFGLPMQD 509
           +AY GLC FCLY  A+ SQS+ +     +GRR++    QD
Sbjct: 140 IAYAGLCLFCLYMLAECSQSISSGVGWLVGRRNYASGEQD 179


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